RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 NCOA1Q15788 1441 aa13.82□□□□□ -0.2
COPA-201ENST00000241704 FAM161AQ3B820 660 aa13.82□□□□□ -0.2
COPA-201ENST00000241704 A0A0U1RQG5 324 aaPredicted RBP13.81□□□□□ -0.2
COPA-201ENST00000241704 ATF3P18847 181 aa13.81□□□□□ -0.2
COPA-201ENST00000241704 CHMP4AQ9BY43 222 aa13.81□□□□□ -0.2
COPA-201ENST00000241704 GZF1Q9H116 711 aaPredicted RBP13.81□□□□□ -0.2
COPA-201ENST00000241704 CASC1Q6TDU7 716 aa13.8□□□□□ -0.2
COPA-201ENST00000241704 ANKRD30BQ9BXX2 1392 aa13.8□□□□□ -0.2
COPA-201ENST00000241704 TMEM132EQ6IEE7 984 aa13.8□□□□□ -0.2
COPA-201ENST00000241704 PSME1Q06323 249 aa13.79□□□□□ -0.2
COPA-201ENST00000241704 COG3Q96JB2 828 aa13.79□□□□□ -0.2
COPA-201ENST00000241704 SLC52A1Q9NWF4 448 aa13.79□□□□□ -0.2
COPA-201ENST00000241704 MSNP26038 577 aaKnown RBP13.79□□□□□ -0.2
COPA-201ENST00000241704 MEX3CQ5U5Q3 659 aaKnown RBP13.78□□□□□ -0.2
COPA-201ENST00000241704 LMOD3Q0VAK6 560 aa13.78□□□□□ -0.2
COPA-201ENST00000241704 TMX4Q9H1E5 349 aaPredicted RBP13.78□□□□□ -0.2
COPA-201ENST00000241704 NGEFQ8N5V2 710 aa13.77□□□□□ -0.2
COPA-201ENST00000241704 ADAMTS12P58397 1594 aa13.77□□□□□ -0.2
COPA-201ENST00000241704 CD109Q6YHK3 1445 aa13.77□□□□□ -0.2
COPA-201ENST00000241704 UGGT2Q9NYU1 1516 aa13.77□□□□□ -0.21
COPA-201ENST00000241704 CCDC184Q52MB2 194 aa13.77□□□□□ -0.21
COPA-201ENST00000241704 GPATCH8Q9UKJ3 1502 aaKnown RBP13.77□□□□□ -0.21
COPA-201ENST00000241704 TXNDC2Q86VQ3 553 aa13.76□□□□□ -0.21
COPA-201ENST00000241704 NUP153P49790 1475 aaKnown RBP13.75□□□□□ -0.21
COPA-201ENST00000241704 CTTNBP2Q8WZ74 1663 aa13.75□□□□□ -0.21
COPA-201ENST00000241704 STK31Q9BXU1 1019 aa13.75□□□□□ -0.21
COPA-201ENST00000241704 SMC4Q9NTJ3 1288 aa13.75□□□□□ -0.21
COPA-201ENST00000241704 RAPGEF6Q8TEU7 1601 aa13.75□□□□□ -0.21
COPA-201ENST00000241704 RRP7AQ9Y3A4 280 aaKnown RBP13.75□□□□□ -0.21
COPA-201ENST00000241704 ATP10BO94823 1461 aa13.75□□□□□ -0.21
COPA-201ENST00000241704 E9PSI1 815 aa13.75□□□□□ -0.21
COPA-201ENST00000241704 GOLGA6L22H0YM25 854 aa13.75□□□□□ -0.21
COPA-201ENST00000241704 APAF1O14727 1248 aa13.75□□□□□ -0.21
COPA-201ENST00000241704 BRD4O60885 1362 aaPredicted RBP13.74□□□□□ -0.21
COPA-201ENST00000241704 KIF21AQ7Z4S6 1674 aa13.74□□□□□ -0.21
COPA-201ENST00000241704 TPM2P07951 284 aa13.74□□□□□ -0.21
COPA-201ENST00000241704 CENPQQ7L2Z9 268 aaPredicted RBP13.74□□□□□ -0.21
COPA-201ENST00000241704 RWDD1Q9H446 243 aaPredicted RBP13.74□□□□□ -0.21
COPA-201ENST00000241704 KCNJ4P48050 445 aa13.74□□□□□ -0.21
COPA-201ENST00000241704 ITPRIPQ8IWB1 547 aa13.74□□□□□ -0.21
COPA-201ENST00000241704 RPGRIP1LQ68CZ1 1315 aa13.73□□□□□ -0.21
COPA-201ENST00000241704 GTF2E1P29083 439 aaPredicted RBP13.73□□□□□ -0.21
COPA-201ENST00000241704 FGD1P98174 961 aa13.73□□□□□ -0.21
COPA-201ENST00000241704 THEMISQ8N1K5 641 aaPredicted RBP13.73□□□□□ -0.21
COPA-201ENST00000241704 ADGRL1O94910 1474 aa13.73□□□□□ -0.21
COPA-201ENST00000241704 CABP2Q9NPB3 220 aa13.72□□□□□ -0.21
COPA-201ENST00000241704 PROSER2Q86WR7 435 aaPredicted RBP13.72□□□□□ -0.21
COPA-201ENST00000241704 DIAPH1O60610 1272 aaKnown RBP13.71□□□□□ -0.21
COPA-201ENST00000241704 WDR62O43379 1518 aa13.71□□□□□ -0.21
COPA-201ENST00000241704 PMFBP1Q8TBY8 1022 aa13.71□□□□□ -0.21
COPA-201ENST00000241704 PTPRKQ15262 1439 aa13.71□□□□□ -0.22
COPA-201ENST00000241704 ERBINQ96RT1 1412 aa13.7□□□□□ -0.22
COPA-201ENST00000241704 CLUAP1Q96AJ1 413 aa13.7□□□□□ -0.22
COPA-201ENST00000241704 CRBNQ96SW2 442 aa13.7□□□□□ -0.22
COPA-201ENST00000241704 KIAA0556O60303 1618 aa13.7□□□□□ -0.22
COPA-201ENST00000241704 MAPKBP1O60336 1514 aa13.69□□□□□ -0.22
COPA-201ENST00000241704 TAOK2Q9UL54 1235 aa13.69□□□□□ -0.22
COPA-201ENST00000241704 SPRYD3Q8NCJ5 442 aa13.69□□□□□ -0.22
COPA-201ENST00000241704 C1orf141Q5JVX7 400 aa13.69□□□□□ -0.22
COPA-201ENST00000241704 POGZQ7Z3K3 1410 aa13.68□□□□□ -0.22
COPA-201ENST00000241704 CDK11BP21127 795 aaKnown RBP13.68□□□□□ -0.22
COPA-201ENST00000241704 MRE11P49959 708 aa13.68□□□□□ -0.22
COPA-201ENST00000241704 RUNDC1Q96C34 613 aa13.68□□□□□ -0.22
COPA-201ENST00000241704 MAP7D2Q96T17 732 aa13.68□□□□□ -0.22
COPA-201ENST00000241704 GGNBP2Q9H3C7 697 aa13.68□□□□□ -0.22
COPA-201ENST00000241704 CHMP3Q9Y3E7 222 aa13.68□□□□□ -0.22
COPA-201ENST00000241704 EIF4G3O43432 1585 aaKnown RBP13.67□□□□□ -0.22
COPA-201ENST00000241704 FANCAO15360 1455 aa13.67□□□□□ -0.22
COPA-201ENST00000241704 RPRD2Q5VT52 1461 aaKnown RBP13.67□□□□□ -0.22
COPA-201ENST00000241704 PLIN1O60240 522 aa13.67□□□□□ -0.22
COPA-201ENST00000241704 TAF7LQ5H9L4 462 aa13.67□□□□□ -0.22
COPA-201ENST00000241704 APBB1O00213 710 aa13.67□□□□□ -0.22
COPA-201ENST00000241704 TEFQ10587 303 aa13.67□□□□□ -0.22
COPA-201ENST00000241704 PRAM1Q96QH2 718 aa13.67□□□□□ -0.22
COPA-201ENST00000241704 CFAP44Q96MT7 982 aa13.66□□□□□ -0.22
COPA-201ENST00000241704 ARID3AQ99856 593 aa13.66□□□□□ -0.22
COPA-201ENST00000241704 PPP2R1AP30153 589 aa13.66□□□□□ -0.22
COPA-201ENST00000241704 PHF23Q9BUL5 403 aaPredicted RBP13.66□□□□□ -0.22
COPA-201ENST00000241704 ISY1Q9ULR0 285 aaKnown RBP13.66□□□□□ -0.22
COPA-201ENST00000241704 PLCH2O75038 1416 aa13.66□□□□□ -0.22
COPA-201ENST00000241704 NUP160Q12769 1436 aa13.66□□□□□ -0.22
COPA-201ENST00000241704 SYTL4Q96C24 671 aaPredicted RBP13.66□□□□□ -0.22
COPA-201ENST00000241704 HDAC5Q9UQL6 1122 aa13.66□□□□□ -0.22
COPA-201ENST00000241704 PTMSP20962 102 aa13.66□□□□□ -0.22
COPA-201ENST00000241704 DNTTIP2Q5QJE6 756 aaKnown RBP13.66□□□□□ -0.22
COPA-201ENST00000241704 HSCBQ8IWL3 235 aa13.66□□□□□ -0.22
COPA-201ENST00000241704 NAP1L2Q9ULW6 460 aaPredicted RBP13.66□□□□□ -0.22
COPA-201ENST00000241704 ABCA5Q8WWZ7 1642 aa13.65□□□□□ -0.22
COPA-201ENST00000241704 ADAMTS8Q9UP79 889 aa13.65□□□□□ -0.22
COPA-201ENST00000241704 ANKLE2Q86XL3 938 aa13.65□□□□□ -0.22
COPA-201ENST00000241704 DDX11L8A8MPP1 907 aa13.64□□□□□ -0.23
COPA-201ENST00000241704 SLC12A5Q9H2X9 1139 aa13.64□□□□□ -0.23
COPA-201ENST00000241704 G3V3G9 751 aa13.64□□□□□ -0.23
COPA-201ENST00000241704 DCAF8Q5TAQ9 597 aa13.64□□□□□ -0.23
COPA-201ENST00000241704 MTHFSP49914 203 aa13.64□□□□□ -0.23
COPA-201ENST00000241704 PDCL3Q9H2J4 239 aa13.64□□□□□ -0.23
COPA-201ENST00000241704 GORABQ5T7V8 394 aa13.64□□□□□ -0.23
COPA-201ENST00000241704 TCOF1Q13428 1488 aaKnown RBP13.64□□□□□ -0.23
COPA-201ENST00000241704 GBP4Q96PP9 640 aa13.63□□□□□ -0.23
COPA-201ENST00000241704 RIPK4P57078 832 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms