RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 HNRNPMP52272 730 aaKnown RBP eCLIP14.25□□□□□ -0.13
TTC1-201ENST00000231238 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.25□□□□□ -0.13
TTC1-201ENST00000231238 DHX57Q6P158 1386 aaKnown RBP14.24□□□□□ -0.13
TTC1-201ENST00000231238 PLEKHH2Q8IVE3 1493 aa14.24□□□□□ -0.13
TTC1-201ENST00000231238 NAIPQ13075 1403 aa14.24□□□□□ -0.13
TTC1-201ENST00000231238 C2orf72A6NCS6 295 aa14.24□□□□□ -0.13
TTC1-201ENST00000231238 RSPH4AQ5TD94 716 aa14.24□□□□□ -0.13
TTC1-201ENST00000231238 SPRYD3Q8NCJ5 442 aa14.24□□□□□ -0.13
TTC1-201ENST00000231238 TRIM52Q96A61 297 aa14.24□□□□□ -0.13
TTC1-201ENST00000231238 FAM163AQ96GL9 167 aaPredicted RBP14.24□□□□□ -0.13
TTC1-201ENST00000231238 ROCK1Q13464 1354 aa14.24□□□□□ -0.13
TTC1-201ENST00000231238 CLSPNQ9HAW4 1339 aa14.23□□□□□ -0.13
TTC1-201ENST00000231238 PLCH2O75038 1416 aa14.23□□□□□ -0.13
TTC1-201ENST00000231238 AKNAQ7Z591 1439 aa14.23□□□□□ -0.13
TTC1-201ENST00000231238 ANKRD30AQ9BXX3 1397 aa14.23□□□□□ -0.13
TTC1-201ENST00000231238 ACIN1Q9UKV3 1341 aaKnown RBP14.22□□□□□ -0.13
TTC1-201ENST00000231238 PAXIP1Q6ZW49 1069 aaPredicted RBP14.21□□□□□ -0.13
TTC1-201ENST00000231238 CDC42BPBQ9Y5S2 1711 aa14.21□□□□□ -0.13
TTC1-201ENST00000231238 HOXB3P14651 431 aaPredicted RBP14.2□□□□□ -0.14
TTC1-201ENST00000231238 C9orf84Q5VXU9 1444 aa14.2□□□□□ -0.14
TTC1-201ENST00000231238 SAMD9LQ8IVG5 1584 aa14.2□□□□□ -0.14
TTC1-201ENST00000231238 CCDC141Q6ZP82 1450 aa14.2□□□□□ -0.14
TTC1-201ENST00000231238 SYCP2Q9BX26 1530 aa14.19□□□□□ -0.14
TTC1-201ENST00000231238 GCC2Q8IWJ2 1684 aa14.19□□□□□ -0.14
TTC1-201ENST00000231238 CFAP44Q96MT7 982 aa14.18□□□□□ -0.14
TTC1-201ENST00000231238 MYT1LQ9UL68 1186 aa14.18□□□□□ -0.14
TTC1-201ENST00000231238 ARHGEF5Q12774 1597 aa14.18□□□□□ -0.14
TTC1-201ENST00000231238 SNPHO15079 494 aa14.18□□□□□ -0.14
TTC1-201ENST00000231238 SHANK2Q9UPX8 1470 aa14.17□□□□□ -0.14
TTC1-201ENST00000231238 ADGBQ8N7X0 1667 aa14.17□□□□□ -0.14
TTC1-201ENST00000231238 ABCA9Q8IUA7 1624 aa14.17□□□□□ -0.14
TTC1-201ENST00000231238 ST18O60284 1047 aa14.17□□□□□ -0.14
TTC1-201ENST00000231238 CROCC2H7BZ55 1655 aa14.17□□□□□ -0.14
TTC1-201ENST00000231238 KIAA1107Q9UPP5 1409 aa14.16□□□□□ -0.14
TTC1-201ENST00000231238 FANCAO15360 1455 aa14.16□□□□□ -0.14
TTC1-201ENST00000231238 CADPS2Q86UW7 1296 aa14.16□□□□□ -0.14
TTC1-201ENST00000231238 TMC2Q8TDI7 906 aa14.16□□□□□ -0.14
TTC1-201ENST00000231238 ARAP3Q8WWN8 1544 aa14.16□□□□□ -0.14
TTC1-201ENST00000231238 NCOA1Q15788 1441 aa14.15□□□□□ -0.14
TTC1-201ENST00000231238 CD109Q6YHK3 1445 aa14.15□□□□□ -0.14
TTC1-201ENST00000231238 ADGRL2O95490 1459 aa14.14□□□□□ -0.15
TTC1-201ENST00000231238 MBD5Q9P267 1494 aa14.14□□□□□ -0.15
TTC1-201ENST00000231238 GPHNQ9NQX3 736 aaPredicted RBP14.14□□□□□ -0.15
TTC1-201ENST00000231238 CRISPLD2Q9H0B8 497 aa14.13□□□□□ -0.15
TTC1-201ENST00000231238 NCKAP5LQ9HCH0 1330 aa14.13□□□□□ -0.15
TTC1-201ENST00000231238 KIF15Q9NS87 1388 aa14.13□□□□□ -0.15
TTC1-201ENST00000231238 MAPKBP1O60336 1514 aa14.12□□□□□ -0.15
TTC1-201ENST00000231238 SPAG9O60271 1321 aaKnown RBP14.12□□□□□ -0.15
TTC1-201ENST00000231238 ANKRD50Q9ULJ7 1429 aa14.11□□□□□ -0.15
TTC1-201ENST00000231238 ABCC1P33527 1531 aa14.11□□□□□ -0.15
TTC1-201ENST00000231238 ADGRL1O94910 1474 aa14.11□□□□□ -0.15
TTC1-201ENST00000231238 NEUROD1Q13562 356 aa14.11□□□□□ -0.15
TTC1-201ENST00000231238 CFAP74Q9C0B2 1584 aa14.09□□□□□ -0.15
TTC1-201ENST00000231238 SCAPERQ9BY12 1400 aa14.09□□□□□ -0.15
TTC1-201ENST00000231238 FAM69CQ0P6D2 419 aa14.09□□□□□ -0.15
TTC1-201ENST00000231238 DSG2Q14126 1118 aa14.09□□□□□ -0.15
TTC1-201ENST00000231238 FOXK1P85037 733 aa14.08□□□□□ -0.16
TTC1-201ENST00000231238 KDM6BO15054 1643 aa14.08□□□□□ -0.16
TTC1-201ENST00000231238 TRAPPC8Q9Y2L5 1435 aa14.08□□□□□ -0.16
TTC1-201ENST00000231238 DOK7Q18PE1 504 aa14.07□□□□□ -0.16
TTC1-201ENST00000231238 AFAP1Q8N556 730 aa14.07□□□□□ -0.16
TTC1-201ENST00000231238 MPHOSPH9Q99550 1183 aa14.07□□□□□ -0.16
TTC1-201ENST00000231238 ARHGEF12Q9NZN5 1544 aa14.07□□□□□ -0.16
TTC1-201ENST00000231238 MAST1Q9Y2H9 1570 aa14.07□□□□□ -0.16
TTC1-201ENST00000231238 PDE4AP27815 886 aa14.05□□□□□ -0.16
TTC1-201ENST00000231238 PLPP6Q8IY26 295 aa14.05□□□□□ -0.16
TTC1-201ENST00000231238 SIN3AQ96ST3 1273 aa14.04□□□□□ -0.16
TTC1-201ENST00000231238 NUP155O75694 1391 aa14.04□□□□□ -0.16
TTC1-201ENST00000231238 RTEL1-TNFRSF6BF6WH68 1400 aa14.02□□□□□ -0.16
TTC1-201ENST00000231238 LARP6Q9BRS8 491 aaKnown RBP14.02□□□□□ -0.16
TTC1-201ENST00000231238 TONSLQ96HA7 1378 aa14.02□□□□□ -0.17
TTC1-201ENST00000231238 NEO1Q92859 1461 aa14.02□□□□□ -0.17
TTC1-201ENST00000231238 PLXNC1O60486 1568 aa14.02□□□□□ -0.17
TTC1-201ENST00000231238 DUOX2Q9NRD8 1548 aa14.01□□□□□ -0.17
TTC1-201ENST00000231238 POTEMA6NI47 508 aa14.01□□□□□ -0.17
TTC1-201ENST00000231238 POTEGQ6S5H5 508 aa14.01□□□□□ -0.17
TTC1-201ENST00000231238 ZNF710Q8N1W2 664 aa14.01□□□□□ -0.17
TTC1-201ENST00000231238 ZNF518AQ6AHZ1 1483 aa14.01□□□□□ -0.17
TTC1-201ENST00000231238 GLI2P10070 1586 aa14.01□□□□□ -0.17
TTC1-201ENST00000231238 GPR153Q6NV75 609 aa14□□□□□ -0.17
TTC1-201ENST00000231238 MARVELD3Q96A59 401 aa14□□□□□ -0.17
TTC1-201ENST00000231238 ATP7AQ04656 1500 aa13.99□□□□□ -0.17
TTC1-201ENST00000231238 DIP2BQ9P265 1576 aa13.99□□□□□ -0.17
TTC1-201ENST00000231238 SLC34A2O95436 690 aa13.99□□□□□ -0.17
TTC1-201ENST00000231238 HOXB1P14653 301 aaPredicted RBP13.99□□□□□ -0.17
TTC1-201ENST00000231238 MFSD10Q14728 455 aa13.99□□□□□ -0.17
TTC1-201ENST00000231238 PPP1R15BQ5SWA1 713 aa13.99□□□□□ -0.17
TTC1-201ENST00000231238 TIMELESSQ9UNS1 1208 aa13.99□□□□□ -0.17
TTC1-201ENST00000231238 ERBINQ96RT1 1412 aa13.98□□□□□ -0.17
TTC1-201ENST00000231238 DENND4BO75064 1496 aaPredicted RBP13.98□□□□□ -0.17
TTC1-201ENST00000231238 MAP3K4Q9Y6R4 1608 aa13.98□□□□□ -0.17
TTC1-201ENST00000231238 ZFYVE16Q7Z3T8 1539 aa13.98□□□□□ -0.17
TTC1-201ENST00000231238 POGZQ7Z3K3 1410 aa13.98□□□□□ -0.17
TTC1-201ENST00000231238 TEX14Q8IWB6 1497 aa13.97□□□□□ -0.17
TTC1-201ENST00000231238 RIMBP2O15034 1052 aa13.97□□□□□ -0.17
TTC1-201ENST00000231238 ZSWIM6Q9HCJ5 1215 aa13.97□□□□□ -0.17
TTC1-201ENST00000231238 TSHZ2Q9NRE2 1034 aa13.97□□□□□ -0.17
TTC1-201ENST00000231238 ARSIQ5FYB1 569 aa13.96□□□□□ -0.17
TTC1-201ENST00000231238 KHSRPQ92945 711 aaKnown RBP eCLIP13.96□□□□□ -0.175e-7■■■□□ 14.9
TTC1-201ENST00000231238 PZPP20742 1482 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms