RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 TARBP1Q13395 1621 aaKnown RBP18.02■□□□□ 0.48
PCDHB3-201ENST00000231130 AMER1Q5JTC6 1135 aaPredicted RBP18.02■□□□□ 0.48
PCDHB3-201ENST00000231130 MYH16Q9H6N6 1097 aa18.02■□□□□ 0.48
PCDHB3-201ENST00000231130 USP19O94966 1318 aa18.02■□□□□ 0.48
PCDHB3-201ENST00000231130 CENPJQ9HC77 1338 aaPredicted RBP18.02■□□□□ 0.48
PCDHB3-201ENST00000231130 SENP3Q9H4L4 574 aaPredicted RBP18.02■□□□□ 0.48
PCDHB3-201ENST00000231130 ARHGEF12Q9NZN5 1544 aa18.02■□□□□ 0.48
PCDHB3-201ENST00000231130 ADAMTS12P58397 1594 aa18.01■□□□□ 0.47
PCDHB3-201ENST00000231130 ADGRL2O95490 1459 aa18.01■□□□□ 0.47
PCDHB3-201ENST00000231130 COL17A1Q9UMD9 1497 aaPredicted RBP18■□□□□ 0.47
PCDHB3-201ENST00000231130 PBRM1Q86U86 1689 aa17.99■□□□□ 0.47
PCDHB3-201ENST00000231130 E9PSI1 815 aa17.99■□□□□ 0.47
PCDHB3-201ENST00000231130 MFAP1P55081 439 aaKnown RBP17.99■□□□□ 0.47
PCDHB3-201ENST00000231130 ZNF521Q96K83 1311 aa17.98■□□□□ 0.47
PCDHB3-201ENST00000231130 TBC1D2Q9BYX2 928 aa17.97■□□□□ 0.47
PCDHB3-201ENST00000231130 A2MP01023 1474 aa17.97■□□□□ 0.47
PCDHB3-201ENST00000231130 ESPNB1AK53 854 aa17.97■□□□□ 0.47
PCDHB3-201ENST00000231130 MAGI2Q86UL8 1455 aa17.97■□□□□ 0.47
PCDHB3-201ENST00000231130 SLC24A1O60721 1099 aa17.97■□□□□ 0.47
PCDHB3-201ENST00000231130 ADGBQ8N7X0 1667 aa17.97■□□□□ 0.47
PCDHB3-201ENST00000231130 PDZRN3Q9UPQ7 1066 aa17.96■□□□□ 0.47
PCDHB3-201ENST00000231130 PCDHB15Q9Y5E8 787 aa17.96■□□□□ 0.47
PCDHB3-201ENST00000231130 FAM13BQ9NYF5 915 aa17.96■□□□□ 0.46
PCDHB3-201ENST00000231130 CGNL1Q0VF96 1302 aa17.95■□□□□ 0.46
PCDHB3-201ENST00000231130 FAM135AQ9P2D6 1515 aa17.95■□□□□ 0.46
PCDHB3-201ENST00000231130 RLBP1P12271 317 aa17.94■□□□□ 0.46
PCDHB3-201ENST00000231130 MAPK8IP3Q9UPT6 1336 aa17.94■□□□□ 0.46
PCDHB3-201ENST00000231130 PLEKHH2Q8IVE3 1493 aa17.94■□□□□ 0.46
PCDHB3-201ENST00000231130 KDM5DQ9BY66 1539 aa17.93■□□□□ 0.46
PCDHB3-201ENST00000231130 E9PCH4 1651 aa17.93■□□□□ 0.46
PCDHB3-201ENST00000231130 PDCL3Q9H2J4 239 aa17.93■□□□□ 0.46
PCDHB3-201ENST00000231130 CARMIL2Q6F5E8 1435 aa17.93■□□□□ 0.46
PCDHB3-201ENST00000231130 NKTRP30414 1462 aaKnown RBP17.93■□□□□ 0.46
PCDHB3-201ENST00000231130 ITSN2Q9NZM3 1697 aa17.93■□□□□ 0.46
PCDHB3-201ENST00000231130 CDCA8Q53HL2 280 aa17.93■□□□□ 0.46
PCDHB3-201ENST00000231130 WWC1Q8IX03 1113 aa17.92■□□□□ 0.46
PCDHB3-201ENST00000231130 CEP170Q5SW79 1584 aa17.92■□□□□ 0.46
PCDHB3-201ENST00000231130 MAGI1Q96QZ7 1491 aaPredicted RBP17.91■□□□□ 0.46
PCDHB3-201ENST00000231130 FOXD4L1Q9NU39 408 aa17.91■□□□□ 0.46
PCDHB3-201ENST00000231130 GRIN2AQ12879 1464 aa17.91■□□□□ 0.46
PCDHB3-201ENST00000231130 CHGAP10645 457 aaKnown RBP17.91■□□□□ 0.46
PCDHB3-201ENST00000231130 KIAA1211Q6ZU35 1233 aa17.91■□□□□ 0.46
PCDHB3-201ENST00000231130 PLA2R1Q13018 1463 aa17.91■□□□□ 0.46
PCDHB3-201ENST00000231130 EIF3AQ14152 1382 aaKnown RBP17.9■□□□□ 0.46
PCDHB3-201ENST00000231130 PDE3AQ14432 1141 aa17.89■□□□□ 0.45
PCDHB3-201ENST00000231130 AAMPQ13685 434 aa17.89■□□□□ 0.45
PCDHB3-201ENST00000231130 CFAP70Q5T0N1 1121 aa17.88■□□□□ 0.45
PCDHB3-201ENST00000231130 FTSJ3Q8IY81 847 aaKnown RBP17.88■□□□□ 0.45
PCDHB3-201ENST00000231130 GPRASP1Q5JY77 1395 aa17.88■□□□□ 0.45
PCDHB3-201ENST00000231130 TRMT2AQ8IZ69 625 aaKnown RBP17.88■□□□□ 0.45
PCDHB3-201ENST00000231130 ATP10BO94823 1461 aa17.88■□□□□ 0.45
PCDHB3-201ENST00000231130 TRPM1Q7Z4N2 1603 aa17.88■□□□□ 0.45
PCDHB3-201ENST00000231130 PMFBP1Q8TBY8 1022 aa17.88■□□□□ 0.45
PCDHB3-201ENST00000231130 TRAK2O60296 914 aa17.87■□□□□ 0.45
PCDHB3-201ENST00000231130 MCM4P33991 863 aa17.87■□□□□ 0.45
PCDHB3-201ENST00000231130 TCP11L2Q8N4U5 519 aa17.87■□□□□ 0.45
PCDHB3-201ENST00000231130 MORC1Q86VD1 984 aa17.87■□□□□ 0.45
PCDHB3-201ENST00000231130 MRE11P49959 708 aa17.87■□□□□ 0.45
PCDHB3-201ENST00000231130 TBC1D32Q96NH3 1257 aa17.87■□□□□ 0.45
PCDHB3-201ENST00000231130 ANTXR1Q9H6X2 564 aa17.87■□□□□ 0.45
PCDHB3-201ENST00000231130 ZHX1Q9UKY1 873 aaPredicted RBP17.87■□□□□ 0.45
PCDHB3-201ENST00000231130 RARSP54136 660 aaKnown RBP17.86■□□□□ 0.45
PCDHB3-201ENST00000231130 TPM2P07951 284 aa17.86■□□□□ 0.45
PCDHB3-201ENST00000231130 CARD14Q9BXL6 1004 aa17.86■□□□□ 0.45
PCDHB3-201ENST00000231130 PRDM10Q9NQV6 1147 aa17.86■□□□□ 0.45
PCDHB3-201ENST00000231130 WDR7Q9Y4E6 1490 aa17.86■□□□□ 0.45
PCDHB3-201ENST00000231130 C22orf23Q9BZE7 217 aa17.85■□□□□ 0.45
PCDHB3-201ENST00000231130 RWDD1Q9H446 243 aaPredicted RBP17.85■□□□□ 0.45
PCDHB3-201ENST00000231130 PTPRGP23470 1445 aa17.85■□□□□ 0.45
PCDHB3-201ENST00000231130 GRPEL1Q9HAV7 217 aa17.84■□□□□ 0.45
PCDHB3-201ENST00000231130 ERBB4Q15303 1308 aa17.84■□□□□ 0.45
PCDHB3-201ENST00000231130 PDE4CQ08493 712 aa17.83■□□□□ 0.45
PCDHB3-201ENST00000231130 CROCC2H7BZ55 1655 aa17.83■□□□□ 0.45
PCDHB3-201ENST00000231130 TSR2Q969E8 191 aaKnown RBP17.83■□□□□ 0.45
PCDHB3-201ENST00000231130 CCDC141Q6ZP82 1450 aa17.83■□□□□ 0.44
PCDHB3-201ENST00000231130 ZBTB7CA1YPR0 619 aa17.82■□□□□ 0.44
PCDHB3-201ENST00000231130 CDC42BPAQ5VT25 1732 aa17.82■□□□□ 0.44
PCDHB3-201ENST00000231130 FGD1P98174 961 aa17.82■□□□□ 0.44
PCDHB3-201ENST00000231130 ITPRIPQ8IWB1 547 aa17.82■□□□□ 0.44
PCDHB3-201ENST00000231130 MRC2Q9UBG0 1479 aa17.81■□□□□ 0.44
PCDHB3-201ENST00000231130 U2AF1L5P0DN76 240 aaPredicted RBP17.81■□□□□ 0.44
PCDHB3-201ENST00000231130 U2AF1Q01081 240 aaKnown RBP eCLIP17.81■□□□□ 0.44
PCDHB3-201ENST00000231130 CALD1Q05682 793 aaKnown RBP17.81■□□□□ 0.44
PCDHB3-201ENST00000231130 HSCBQ8IWL3 235 aa17.8■□□□□ 0.44
PCDHB3-201ENST00000231130 SLC12A5Q9H2X9 1139 aa17.8■□□□□ 0.44
PCDHB3-201ENST00000231130 ANP32BQ92688 251 aaKnown RBP17.8■□□□□ 0.44
PCDHB3-201ENST00000231130 TRAK1Q9UPV9 953 aa17.8■□□□□ 0.44
PCDHB3-201ENST00000231130 ABCC10Q5T3U5 1492 aa17.8■□□□□ 0.44
PCDHB3-201ENST00000231130 INSRP06213 1382 aa17.8■□□□□ 0.44
PCDHB3-201ENST00000231130 RSPH4AQ5TD94 716 aa17.8■□□□□ 0.44
PCDHB3-201ENST00000231130 R3HCC1Q9Y3T6 440 aaKnown RBP17.8■□□□□ 0.44
PCDHB3-201ENST00000231130 SHANK2Q9UPX8 1470 aa17.79■□□□□ 0.44
PCDHB3-201ENST00000231130 CHMP5Q9NZZ3 219 aa17.79■□□□□ 0.44
PCDHB3-201ENST00000231130 PRDM15P57071 1507 aaPredicted RBP17.79■□□□□ 0.44
PCDHB3-201ENST00000231130 MSNP26038 577 aaKnown RBP17.79■□□□□ 0.44
PCDHB3-201ENST00000231130 SMC4Q9NTJ3 1288 aa17.79■□□□□ 0.44
PCDHB3-201ENST00000231130 U2SURPO15042 1029 aaKnown RBP17.78■□□□□ 0.44
PCDHB3-201ENST00000231130 MTHFSP49914 203 aa17.78■□□□□ 0.44
PCDHB3-201ENST00000231130 EIF4G3O43432 1585 aaKnown RBP17.78■□□□□ 0.44
PCDHB3-201ENST00000231130 SAFB2Q14151 953 aaKnown RBP eCLIP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms