RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 PRKRIP1Q9H875 184 aaPredicted RBP10.76□□□□□ -0.69
SPARC-201ENST00000231061 PSEN1P49768 467 aa10.75□□□□□ -0.69
SPARC-201ENST00000231061 ABCC5O15440 1437 aa10.75□□□□□ -0.69
SPARC-201ENST00000231061 KAT6BQ8WYB5 2073 aa10.75□□□□□ -0.69
SPARC-201ENST00000231061 ANKRD30BQ9BXX2 1392 aa10.75□□□□□ -0.69
SPARC-201ENST00000231061 FAM43AQ8N2R8 423 aa10.75□□□□□ -0.69
SPARC-201ENST00000231061 AXDND1Q5T1B0 1012 aaPredicted RBP10.74□□□□□ -0.69
SPARC-201ENST00000231061 ROCK1Q13464 1354 aa10.73□□□□□ -0.69
SPARC-201ENST00000231061 NCOA1Q15788 1441 aa10.73□□□□□ -0.69
SPARC-201ENST00000231061 PRR29P0C7W0 189 aa10.73□□□□□ -0.69
SPARC-201ENST00000231061 POLD1P28340 1107 aa10.73□□□□□ -0.69
SPARC-201ENST00000231061 EP400NLQ6ZTU2 488 aa10.73□□□□□ -0.69
SPARC-201ENST00000231061 CHMP7Q8WUX9 453 aaPredicted RBP10.73□□□□□ -0.69
SPARC-201ENST00000231061 KIF7Q2M1P5 1343 aa10.73□□□□□ -0.69
SPARC-201ENST00000231061 RPRD2Q5VT52 1461 aaKnown RBP10.73□□□□□ -0.69
SPARC-201ENST00000231061 EGFL6Q8IUX8 553 aa10.72□□□□□ -0.69
SPARC-201ENST00000231061 PRG4Q92954 1404 aaPredicted RBP10.72□□□□□ -0.69
SPARC-201ENST00000231061 KIAA0586Q9BVV6 1533 aa10.72□□□□□ -0.69
SPARC-201ENST00000231061 NUP153P49790 1475 aaKnown RBP10.72□□□□□ -0.69
SPARC-201ENST00000231061 IFT140Q96RY7 1462 aa10.71□□□□□ -0.69
SPARC-201ENST00000231061 LOC102724159A0A0B4J2E5 919 aa10.71□□□□□ -0.69
SPARC-201ENST00000231061 PWP2Q15269 919 aaKnown RBP10.71□□□□□ -0.69
SPARC-201ENST00000231061 KIAA0556O60303 1618 aa10.71□□□□□ -0.7
SPARC-201ENST00000231061 HSP90AB4PQ58FF6 505 aa10.71□□□□□ -0.7
SPARC-201ENST00000231061 DISP1Q96F81 1524 aa10.71□□□□□ -0.7
SPARC-201ENST00000231061 PKD2Q13563 968 aa10.7□□□□□ -0.7
SPARC-201ENST00000231061 PAK3O75914 559 aaPredicted RBP10.7□□□□□ -0.7
SPARC-201ENST00000231061 DNMT1P26358 1616 aaKnown RBP10.7□□□□□ -0.7
SPARC-201ENST00000231061 SENP3-EIF4A1A0A087X0R7 540 aa10.7□□□□□ -0.7
SPARC-201ENST00000231061 PPP4R3BQ5MIZ7 849 aa10.69□□□□□ -0.7
SPARC-201ENST00000231061 TEX14Q8IWB6 1497 aa10.69□□□□□ -0.7
SPARC-201ENST00000231061 ARID4AP29374 1257 aaPredicted RBP10.69□□□□□ -0.7
SPARC-201ENST00000231061 BRPF1P55201 1214 aaPredicted RBP10.69□□□□□ -0.7
SPARC-201ENST00000231061 ZBTB9Q96C00 473 aa10.69□□□□□ -0.7
SPARC-201ENST00000231061 STK24Q9Y6E0 443 aa10.69□□□□□ -0.7
SPARC-201ENST00000231061 PPP4R2Q9NY27 417 aa10.69□□□□□ -0.7
SPARC-201ENST00000231061 RAPGEF6Q8TEU7 1601 aa10.69□□□□□ -0.7
SPARC-201ENST00000231061 TROQ12816 1431 aaPredicted RBP10.68□□□□□ -0.7
SPARC-201ENST00000231061 CAMSAP2Q08AD1 1489 aa10.68□□□□□ -0.7
SPARC-201ENST00000231061 GRIN2AQ12879 1464 aa10.68□□□□□ -0.7
SPARC-201ENST00000231061 ZNF513Q8N8E2 541 aaPredicted RBP10.68□□□□□ -0.7
SPARC-201ENST00000231061 APBB1O00213 710 aa10.68□□□□□ -0.7
SPARC-201ENST00000231061 B4GALNT3Q6L9W6 998 aa10.68□□□□□ -0.7
SPARC-201ENST00000231061 DDRGK1Q96HY6 314 aa10.68□□□□□ -0.7
SPARC-201ENST00000231061 CARD10Q9BWT7 1032 aa10.68□□□□□ -0.7
SPARC-201ENST00000231061 PLB1Q6P1J6 1458 aa10.67□□□□□ -0.7
SPARC-201ENST00000231061 ZBED9Q6R2W3 1325 aa10.67□□□□□ -0.7
SPARC-201ENST00000231061 STK26Q9P289 416 aa10.67□□□□□ -0.7
SPARC-201ENST00000231061 PDCL3Q9H2J4 239 aa10.67□□□□□ -0.7
SPARC-201ENST00000231061 USP47Q96K76 1375 aa10.66□□□□□ -0.7
SPARC-201ENST00000231061 EXOC8Q8IYI6 725 aa10.66□□□□□ -0.7
SPARC-201ENST00000231061 ANKRD30AQ9BXX3 1397 aa10.66□□□□□ -0.7
SPARC-201ENST00000231061 PIK3R5Q8WYR1 880 aa10.66□□□□□ -0.7
SPARC-201ENST00000231061 PZPP20742 1482 aa10.65□□□□□ -0.7
SPARC-201ENST00000231061 ERCC6Q03468 1493 aa10.65□□□□□ -0.7
SPARC-201ENST00000231061 SMARCA5O60264 1052 aaPredicted RBP10.65□□□□□ -0.7
SPARC-201ENST00000231061 SPINK5Q9NQ38 1064 aaPredicted RBP10.65□□□□□ -0.7
SPARC-201ENST00000231061 KIAA1107Q9UPP5 1409 aa10.65□□□□□ -0.71
SPARC-201ENST00000231061 VGFO15240 615 aaPredicted RBP10.65□□□□□ -0.71
SPARC-201ENST00000231061 NOL8Q76FK4 1167 aaKnown RBP10.64□□□□□ -0.71
SPARC-201ENST00000231061 NUP155O75694 1391 aa10.64□□□□□ -0.71
SPARC-201ENST00000231061 CARD11Q9BXL7 1154 aa10.64□□□□□ -0.71
SPARC-201ENST00000231061 JPH4Q96JJ6 628 aa10.63□□□□□ -0.71
SPARC-201ENST00000231061 GPATCH8Q9UKJ3 1502 aaKnown RBP10.63□□□□□ -0.71
SPARC-201ENST00000231061 CARMIL2Q6F5E8 1435 aa10.63□□□□□ -0.71
SPARC-201ENST00000231061 SPATA31E1Q6ZUB1 1445 aa10.63□□□□□ -0.71
SPARC-201ENST00000231061 TSPY4P0CV99 314 aa10.63□□□□□ -0.71
SPARC-201ENST00000231061 TSPY10P0CW01 314 aa10.63□□□□□ -0.71
SPARC-201ENST00000231061 RINLQ6ZS11 566 aa10.63□□□□□ -0.71
SPARC-201ENST00000231061 ANKRD50Q9ULJ7 1429 aa10.63□□□□□ -0.71
SPARC-201ENST00000231061 EIF4G3O43432 1585 aaKnown RBP10.63□□□□□ -0.71
SPARC-201ENST00000231061 PNNQ9H307 717 aaKnown RBP10.62□□□□□ -0.71
SPARC-201ENST00000231061 ZNF500O60304 480 aaPredicted RBP10.62□□□□□ -0.71
SPARC-201ENST00000231061 TMC1Q8TDI8 760 aa10.62□□□□□ -0.71
SPARC-201ENST00000231061 WASHC2CQ9Y4E1 1318 aa10.62□□□□□ -0.71
SPARC-201ENST00000231061 MFAP1P55081 439 aaKnown RBP10.61□□□□□ -0.71
SPARC-201ENST00000231061 KIF14Q15058 1648 aa10.61□□□□□ -0.71
SPARC-201ENST00000231061 GOLIM4O00461 696 aa10.6□□□□□ -0.71
SPARC-201ENST00000231061 CT47B1P0C2W7 299 aaPredicted RBP10.6□□□□□ -0.71
SPARC-201ENST00000231061 TNNT2P45379 298 aaPredicted RBP10.6□□□□□ -0.71
SPARC-201ENST00000231061 SPTY2D1Q68D10 685 aaPredicted RBP10.6□□□□□ -0.71
SPARC-201ENST00000231061 NBPF1Q3BBV0 1214 aa10.6□□□□□ -0.71
SPARC-201ENST00000231061 TTC36A6NLP5 189 aa10.6□□□□□ -0.71
SPARC-201ENST00000231061 HNRNPMP52272 730 aaKnown RBP eCLIP10.6□□□□□ -0.71
SPARC-201ENST00000231061 RALBP1Q15311 655 aa10.6□□□□□ -0.71
SPARC-201ENST00000231061 DCAF11Q8TEB1 546 aa10.6□□□□□ -0.71
SPARC-201ENST00000231061 ITSN2Q9NZM3 1697 aa10.6□□□□□ -0.71
SPARC-201ENST00000231061 CENPJQ9HC77 1338 aaPredicted RBP10.6□□□□□ -0.71
SPARC-201ENST00000231061 BANK1Q8NDB2 785 aa10.59□□□□□ -0.71
SPARC-201ENST00000231061 DNAJC14Q6Y2X3 702 aaPredicted RBP10.59□□□□□ -0.71
SPARC-201ENST00000231061 NBPF11Q86T75 865 aa10.59□□□□□ -0.71
SPARC-201ENST00000231061 RIPOR2Q9Y4F9 1068 aa10.59□□□□□ -0.71
SPARC-201ENST00000231061 DHX29Q7Z478 1369 aaKnown RBP10.58□□□□□ -0.71
SPARC-201ENST00000231061 C9orf84Q5VXU9 1444 aa10.58□□□□□ -0.72
SPARC-201ENST00000231061 SYNJ2O15056 1496 aa10.58□□□□□ -0.72
SPARC-201ENST00000231061 MAGI1Q96QZ7 1491 aaPredicted RBP10.58□□□□□ -0.72
SPARC-201ENST00000231061 NUDCQ9Y266 331 aa10.58□□□□□ -0.72
SPARC-201ENST00000231061 CEP170Q5SW79 1584 aa10.58□□□□□ -0.72
SPARC-201ENST00000231061 APBB1IPQ7Z5R6 666 aaPredicted RBP10.58□□□□□ -0.72
SPARC-201ENST00000231061 ADGBQ8N7X0 1667 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms