RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 AMPHP49418 695 aa14.45□□□□□ -0.1
NOD1-201ENST00000222823 GOLGA6L6A8MZA4 724 aa14.45□□□□□ -0.1
NOD1-201ENST00000222823 RRP7AQ9Y3A4 280 aaKnown RBP14.45□□□□□ -0.1
NOD1-201ENST00000222823 WDR62O43379 1518 aa14.45□□□□□ -0.1
NOD1-201ENST00000222823 SLC4A10Q6U841 1118 aa14.45□□□□□ -0.1
NOD1-201ENST00000222823 GBP4Q96PP9 640 aa14.44□□□□□ -0.1
NOD1-201ENST00000222823 RAPGEF6Q8TEU7 1601 aa14.44□□□□□ -0.1
NOD1-201ENST00000222823 HDAC5Q9UQL6 1122 aa14.44□□□□□ -0.1
NOD1-201ENST00000222823 MFAP1P55081 439 aaKnown RBP14.44□□□□□ -0.1
NOD1-201ENST00000222823 NUP153P49790 1475 aaKnown RBP14.43□□□□□ -0.1
NOD1-201ENST00000222823 PLEKHH2Q8IVE3 1493 aa14.43□□□□□ -0.1
NOD1-201ENST00000222823 PNISRQ8TF01 805 aaKnown RBP14.43□□□□□ -0.1
NOD1-201ENST00000222823 IPO9Q96P70 1041 aaKnown RBP14.43□□□□□ -0.1
NOD1-201ENST00000222823 KIF14Q15058 1648 aa14.42□□□□□ -0.1
NOD1-201ENST00000222823 LTV1Q96GA3 475 aaPredicted RBP14.42□□□□□ -0.1
NOD1-201ENST00000222823 GPATCH8Q9UKJ3 1502 aaKnown RBP14.42□□□□□ -0.1
NOD1-201ENST00000222823 ARHGEF11O15085 1522 aa14.42□□□□□ -0.1
NOD1-201ENST00000222823 SMG6Q86US8 1419 aaKnown RBP14.42□□□□□ -0.1
NOD1-201ENST00000222823 EXOC6Q8TAG9 804 aa14.41□□□□□ -0.1
NOD1-201ENST00000222823 CCDC141Q6ZP82 1450 aa14.4□□□□□ -0.1
NOD1-201ENST00000222823 CGNL1Q0VF96 1302 aa14.4□□□□□ -0.1
NOD1-201ENST00000222823 KIAA0556O60303 1618 aa14.4□□□□□ -0.1
NOD1-201ENST00000222823 TRIM6-TRIM34B2RNG4 842 aa14.39□□□□□ -0.11
NOD1-201ENST00000222823 ELL2O00472 640 aaPredicted RBP14.39□□□□□ -0.11
NOD1-201ENST00000222823 GZF1Q9H116 711 aaPredicted RBP14.39□□□□□ -0.11
NOD1-201ENST00000222823 EVC2Q86UK5 1308 aa14.39□□□□□ -0.11
NOD1-201ENST00000222823 BCL2L13Q9BXK5 485 aa14.39□□□□□ -0.11
NOD1-201ENST00000222823 MSNP26038 577 aaKnown RBP14.39□□□□□ -0.11
NOD1-201ENST00000222823 APAF1O14727 1248 aa14.38□□□□□ -0.11
NOD1-201ENST00000222823 NBPF1Q3BBV0 1214 aa14.38□□□□□ -0.11
NOD1-201ENST00000222823 CYB5RLQ6IPT4 315 aa14.38□□□□□ -0.11
NOD1-201ENST00000222823 ITSN2Q9NZM3 1697 aa14.38□□□□□ -0.11
NOD1-201ENST00000222823 PLIN1O60240 522 aa14.38□□□□□ -0.11
NOD1-201ENST00000222823 GORABQ5T7V8 394 aa14.38□□□□□ -0.11
NOD1-201ENST00000222823 E9PSI1 815 aa14.37□□□□□ -0.11
NOD1-201ENST00000222823 GNL2Q13823 731 aaKnown RBP14.37□□□□□ -0.11
NOD1-201ENST00000222823 CHMP3Q9Y3E7 222 aa14.37□□□□□ -0.11
NOD1-201ENST00000222823 COG3Q96JB2 828 aa14.36□□□□□ -0.11
NOD1-201ENST00000222823 MINK1Q8N4C8 1332 aaPredicted RBP14.36□□□□□ -0.11
NOD1-201ENST00000222823 PBRM1Q86U86 1689 aa14.36□□□□□ -0.11
NOD1-201ENST00000222823 PTMSP20962 102 aa14.36□□□□□ -0.11
NOD1-201ENST00000222823 CHAF1AQ13111 956 aaPredicted RBP14.35□□□□□ -0.11
NOD1-201ENST00000222823 GPATCH3Q96I76 525 aa14.35□□□□□ -0.11
NOD1-201ENST00000222823 DRC7Q8IY82 874 aa14.35□□□□□ -0.11
NOD1-201ENST00000222823 CENPQQ7L2Z9 268 aaPredicted RBP14.35□□□□□ -0.11
NOD1-201ENST00000222823 ISY1Q9ULR0 285 aaKnown RBP14.35□□□□□ -0.11
NOD1-201ENST00000222823 ZKSCAN2Q63HK3 967 aa14.34□□□□□ -0.11
NOD1-201ENST00000222823 DNMT1P26358 1616 aaKnown RBP14.34□□□□□ -0.11
NOD1-201ENST00000222823 TAF7LQ5H9L4 462 aa14.34□□□□□ -0.11
NOD1-201ENST00000222823 OSCARQ8IYS5 282 aa14.33□□□□□ -0.11
NOD1-201ENST00000222823 NGEFQ8N5V2 710 aa14.33□□□□□ -0.12
NOD1-201ENST00000222823 MAGI3Q5TCQ9 1506 aa14.33□□□□□ -0.12
NOD1-201ENST00000222823 PDE4AP27815 886 aa14.33□□□□□ -0.12
NOD1-201ENST00000222823 COG6Q9Y2V7 657 aa14.33□□□□□ -0.12
NOD1-201ENST00000222823 GCC2Q8IWJ2 1684 aa14.32□□□□□ -0.12
NOD1-201ENST00000222823 CRBNQ96SW2 442 aa14.32□□□□□ -0.12
NOD1-201ENST00000222823 TARBP1Q13395 1621 aaKnown RBP14.32□□□□□ -0.12
NOD1-201ENST00000222823 HTATSF1O43719 755 aaKnown RBP14.32□□□□□ -0.12
NOD1-201ENST00000222823 DISP1Q96F81 1524 aa14.32□□□□□ -0.12
NOD1-201ENST00000222823 AFAP1Q8N556 730 aa14.31□□□□□ -0.12
NOD1-201ENST00000222823 SYAP1Q96A49 352 aaPredicted RBP14.31□□□□□ -0.12
NOD1-201ENST00000222823 CCDC9Q9Y3X0 531 aaKnown RBP14.31□□□□□ -0.12
NOD1-201ENST00000222823 ERBINQ96RT1 1412 aa14.3□□□□□ -0.12
NOD1-201ENST00000222823 FAM161AQ3B820 660 aa14.29□□□□□ -0.12
NOD1-201ENST00000222823 ANKRD45Q5TZF3 282 aa14.29□□□□□ -0.12
NOD1-201ENST00000222823 ATP10BO94823 1461 aa14.29□□□□□ -0.12
NOD1-201ENST00000222823 RALGAPBQ86X10 1494 aa14.29□□□□□ -0.12
NOD1-201ENST00000222823 DIAPH1O60610 1272 aaKnown RBP14.29□□□□□ -0.12
NOD1-201ENST00000222823 NOL8Q76FK4 1167 aaKnown RBP14.29□□□□□ -0.12
NOD1-201ENST00000222823 FOXD4L1Q9NU39 408 aa14.29□□□□□ -0.12
NOD1-201ENST00000222823 ST18O60284 1047 aa14.28□□□□□ -0.12
NOD1-201ENST00000222823 TEFQ10587 303 aa14.28□□□□□ -0.12
NOD1-201ENST00000222823 ADAMTS8Q9UP79 889 aa14.28□□□□□ -0.12
NOD1-201ENST00000222823 KIAA2012Q0VF49 1180 aa14.27□□□□□ -0.12
NOD1-201ENST00000222823 CDCA7LQ96GN5 454 aa14.27□□□□□ -0.13
NOD1-201ENST00000222823 PZPP20742 1482 aa14.26□□□□□ -0.13
NOD1-201ENST00000222823 GOLGA6L3A6NEY3 463 aa14.26□□□□□ -0.13
NOD1-201ENST00000222823 PPP2R1AP30153 589 aa14.26□□□□□ -0.13
NOD1-201ENST00000222823 TEX14Q8IWB6 1497 aa14.26□□□□□ -0.13
NOD1-201ENST00000222823 SHANK2Q9UPX8 1470 aa14.26□□□□□ -0.13
NOD1-201ENST00000222823 EIF4G3O43432 1585 aaKnown RBP14.25□□□□□ -0.13
NOD1-201ENST00000222823 RIPK4P57078 832 aa14.25□□□□□ -0.13
NOD1-201ENST00000222823 HSP90B1P14625 803 aaKnown RBP14.25□□□□□ -0.13
NOD1-201ENST00000222823 ADGRL2O95490 1459 aa14.25□□□□□ -0.13
NOD1-201ENST00000222823 C1orf141Q5JVX7 400 aa14.24□□□□□ -0.13
NOD1-201ENST00000222823 DDX19BQ9UMR2 479 aa14.24□□□□□ -0.13
NOD1-201ENST00000222823 RILPL2Q969X0 211 aa14.24□□□□□ -0.13
NOD1-201ENST00000222823 GTF2E1P29083 439 aaPredicted RBP14.23□□□□□ -0.13
NOD1-201ENST00000222823 DZIP1LQ8IYY4 767 aaKnown RBP14.23□□□□□ -0.13
NOD1-201ENST00000222823 SLC4A3P48751 1232 aa14.22□□□□□ -0.13
NOD1-201ENST00000222823 RUNDC1Q96C34 613 aa14.22□□□□□ -0.13
NOD1-201ENST00000222823 ARHGEF12Q9NZN5 1544 aa14.22□□□□□ -0.13
NOD1-201ENST00000222823 KIF16BQ96L93 1317 aa14.22□□□□□ -0.13
NOD1-201ENST00000222823 CFAP70Q5T0N1 1121 aa14.22□□□□□ -0.13
NOD1-201ENST00000222823 CCDC34Q96HJ3 373 aa14.21□□□□□ -0.13
NOD1-201ENST00000222823 API5Q9BZZ5 524 aaKnown RBP14.21□□□□□ -0.13
NOD1-201ENST00000222823 CSPP1Q1MSJ5 1256 aa14.21□□□□□ -0.13
NOD1-201ENST00000222823 USP35Q9P2H5 1018 aa14.21□□□□□ -0.13
NOD1-201ENST00000222823 FAM69CQ0P6D2 419 aa14.21□□□□□ -0.13
NOD1-201ENST00000222823 NUP160Q12769 1436 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms