RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 MTHFSP49914 203 aa15.79■□□□□ 0.12
TM9SF4-201ENST00000217315 SYCP2Q9BX26 1530 aa15.79■□□□□ 0.12
TM9SF4-201ENST00000217315 GCC2Q8IWJ2 1684 aa15.78■□□□□ 0.12
TM9SF4-201ENST00000217315 ZBTB7CA1YPR0 619 aa15.78■□□□□ 0.12
TM9SF4-201ENST00000217315 RWDD1Q9H446 243 aaPredicted RBP15.78■□□□□ 0.12
TM9SF4-201ENST00000217315 PAK3O75914 559 aaPredicted RBP15.77■□□□□ 0.12
TM9SF4-201ENST00000217315 GGNBP2Q9H3C7 697 aa15.77■□□□□ 0.12
TM9SF4-201ENST00000217315 FAM135AQ9P2D6 1515 aa15.77■□□□□ 0.11
TM9SF4-201ENST00000217315 CEP170Q5SW79 1584 aa15.77■□□□□ 0.11
TM9SF4-201ENST00000217315 ADGRF5Q8IZF2 1346 aa15.76■□□□□ 0.11
TM9SF4-201ENST00000217315 PRAG1Q86YV5 1406 aa15.76■□□□□ 0.11
TM9SF4-201ENST00000217315 FAM161AQ3B820 660 aa15.76■□□□□ 0.11
TM9SF4-201ENST00000217315 RUNDC1Q96C34 613 aa15.76■□□□□ 0.11
TM9SF4-201ENST00000217315 NUTM2FA1L443 756 aa15.76■□□□□ 0.11
TM9SF4-201ENST00000217315 TCP11L2Q8N4U5 519 aa15.76■□□□□ 0.11
TM9SF4-201ENST00000217315 TESK2Q96S53 571 aa15.76■□□□□ 0.11
TM9SF4-201ENST00000217315 ADGRL2O95490 1459 aa15.76■□□□□ 0.11
TM9SF4-201ENST00000217315 PMFBP1Q8TBY8 1022 aa15.75■□□□□ 0.11
TM9SF4-201ENST00000217315 PANK1Q8TE04 598 aa15.75■□□□□ 0.11
TM9SF4-201ENST00000217315 SPATA31E1Q6ZUB1 1445 aa15.75■□□□□ 0.11
TM9SF4-201ENST00000217315 BCAR3O75815 825 aa15.75■□□□□ 0.11
TM9SF4-201ENST00000217315 SPRYD3Q8NCJ5 442 aa15.75■□□□□ 0.11
TM9SF4-201ENST00000217315 SKAP1Q86WV1 359 aa15.74■□□□□ 0.11
TM9SF4-201ENST00000217315 IPO8O15397 1037 aaKnown RBP15.74■□□□□ 0.11
TM9SF4-201ENST00000217315 HDGFP51858 240 aaKnown RBP15.74■□□□□ 0.11
TM9SF4-201ENST00000217315 SLKQ9H2G2 1235 aaPredicted RBP15.74■□□□□ 0.11
TM9SF4-201ENST00000217315 NGEFQ8N5V2 710 aa15.73■□□□□ 0.11
TM9SF4-201ENST00000217315 SHANK2Q9UPX8 1470 aa15.73■□□□□ 0.11
TM9SF4-201ENST00000217315 C20orf194Q5TEA3 1177 aa15.73■□□□□ 0.11
TM9SF4-201ENST00000217315 RTN4Q9NQC3 1192 aaKnown RBP15.72■□□□□ 0.11
TM9SF4-201ENST00000217315 PLCH2O75038 1416 aa15.72■□□□□ 0.11
TM9SF4-201ENST00000217315 ELL2O00472 640 aaPredicted RBP15.72■□□□□ 0.11
TM9SF4-201ENST00000217315 TRAPPC8Q9Y2L5 1435 aa15.72■□□□□ 0.11
TM9SF4-201ENST00000217315 PER1O15534 1290 aaPredicted RBP15.71■□□□□ 0.11
TM9SF4-201ENST00000217315 FAM69CQ0P6D2 419 aa15.71■□□□□ 0.1
TM9SF4-201ENST00000217315 ADGRL1O94910 1474 aa15.7■□□□□ 0.1
TM9SF4-201ENST00000217315 DENND4BO75064 1496 aaPredicted RBP15.69■□□□□ 0.1
TM9SF4-201ENST00000217315 UHRF1BP1Q6BDS2 1440 aa15.69■□□□□ 0.1
TM9SF4-201ENST00000217315 ZKSCAN2Q63HK3 967 aa15.69■□□□□ 0.1
TM9SF4-201ENST00000217315 FANCAO15360 1455 aa15.68■□□□□ 0.1
TM9SF4-201ENST00000217315 BACH2Q9BYV9 841 aa15.68■□□□□ 0.1
TM9SF4-201ENST00000217315 PARD3Q8TEW0 1356 aa15.68■□□□□ 0.1
TM9SF4-201ENST00000217315 ARHGEF12Q9NZN5 1544 aa15.68■□□□□ 0.1
TM9SF4-201ENST00000217315 RIPK4P57078 832 aa15.68■□□□□ 0.1
TM9SF4-201ENST00000217315 CHMP4BQ9H444 224 aaKnown RBP15.68■□□□□ 0.1
TM9SF4-201ENST00000217315 DIAPH1O60610 1272 aaKnown RBP15.67■□□□□ 0.1
TM9SF4-201ENST00000217315 SLFN5Q08AF3 891 aa15.67■□□□□ 0.1
TM9SF4-201ENST00000217315 MFAP1P55081 439 aaKnown RBP15.66■□□□□ 0.1
TM9SF4-201ENST00000217315 PRAM1Q96QH2 718 aa15.66■□□□□ 0.1
TM9SF4-201ENST00000217315 AMER1Q5JTC6 1135 aaPredicted RBP15.66■□□□□ 0.1
TM9SF4-201ENST00000217315 APBB1O00213 710 aa15.66■□□□□ 0.1
TM9SF4-201ENST00000217315 DUOX2Q9NRD8 1548 aa15.65■□□□□ 0.1
TM9SF4-201ENST00000217315 SCAF11Q99590 1463 aaKnown RBP15.65■□□□□ 0.1
TM9SF4-201ENST00000217315 EIF5BO60841 1220 aaKnown RBP15.65■□□□□ 0.1
TM9SF4-201ENST00000217315 ABCC10Q5T3U5 1492 aa15.65■□□□□ 0.1
TM9SF4-201ENST00000217315 CALD1Q05682 793 aaKnown RBP15.65■□□□□ 0.1
TM9SF4-201ENST00000217315 DUSP27Q5VZP5 1158 aa15.65■□□□□ 0.1
TM9SF4-201ENST00000217315 DZIP1LQ8IYY4 767 aaKnown RBP15.64■□□□□ 0.09
TM9SF4-201ENST00000217315 NSD3Q9BZ95 1437 aa15.64■□□□□ 0.09
TM9SF4-201ENST00000217315 A2MP01023 1474 aa15.64■□□□□ 0.09
TM9SF4-201ENST00000217315 MBD5Q9P267 1494 aa15.64■□□□□ 0.09
TM9SF4-201ENST00000217315 HMOX1P09601 288 aa15.63■□□□□ 0.09
TM9SF4-201ENST00000217315 LMOD2Q6P5Q4 547 aa15.63■□□□□ 0.09
TM9SF4-201ENST00000217315 WWC1Q8IX03 1113 aa15.63■□□□□ 0.09
TM9SF4-201ENST00000217315 CD109Q6YHK3 1445 aa15.63■□□□□ 0.09
TM9SF4-201ENST00000217315 TSR2Q969E8 191 aaKnown RBP15.62■□□□□ 0.09
TM9SF4-201ENST00000217315 HSP90AB1P08238 724 aaKnown RBP15.61■□□□□ 0.09
TM9SF4-201ENST00000217315 HSCBQ8IWL3 235 aa15.61■□□□□ 0.09
TM9SF4-201ENST00000217315 LRRIQ1Q96JM4 1722 aa15.61■□□□□ 0.09
TM9SF4-201ENST00000217315 RTF1Q92541 710 aaKnown RBP15.61■□□□□ 0.09
TM9SF4-201ENST00000217315 SLC52A1Q9NWF4 448 aa15.61■□□□□ 0.09
TM9SF4-201ENST00000217315 COG3Q96JB2 828 aa15.6■□□□□ 0.09
TM9SF4-201ENST00000217315 NOS1P29475 1434 aa15.6■□□□□ 0.09
TM9SF4-201ENST00000217315 PDE3AQ14432 1141 aa15.6■□□□□ 0.09
TM9SF4-201ENST00000217315 ANP32BQ92688 251 aaKnown RBP15.59■□□□□ 0.09
TM9SF4-201ENST00000217315 CABP1Q9NZU7 370 aa15.59■□□□□ 0.09
TM9SF4-201ENST00000217315 LRPPRCP42704 1394 aaKnown RBP15.59■□□□□ 0.09
TM9SF4-201ENST00000217315 KDM5BQ9UGL1 1544 aa15.59■□□□□ 0.09
TM9SF4-201ENST00000217315 RPGRIP1LQ68CZ1 1315 aa15.59■□□□□ 0.09
TM9SF4-201ENST00000217315 EXOSC9Q06265 439 aaKnown RBP15.59■□□□□ 0.09
TM9SF4-201ENST00000217315 IDI1Q13907 227 aa15.59■□□□□ 0.09
TM9SF4-201ENST00000217315 ABCA8O94911 1581 aa15.59■□□□□ 0.09
TM9SF4-201ENST00000217315 ABCC2Q92887 1545 aa15.57■□□□□ 0.08
TM9SF4-201ENST00000217315 USP35Q9P2H5 1018 aa15.57■□□□□ 0.08
TM9SF4-201ENST00000217315 DDX19BQ9UMR2 479 aa15.57■□□□□ 0.08
TM9SF4-201ENST00000217315 ADGBQ8N7X0 1667 aa15.57■□□□□ 0.08
TM9SF4-201ENST00000217315 HAP1P54257 671 aaPredicted RBP15.57■□□□□ 0.08
TM9SF4-201ENST00000217315 NGDNQ8NEJ9 315 aaKnown RBP15.57■□□□□ 0.08
TM9SF4-201ENST00000217315 CASC1Q6TDU7 716 aa15.56■□□□□ 0.08
TM9SF4-201ENST00000217315 CDK19Q9BWU1 502 aa15.56■□□□□ 0.08
TM9SF4-201ENST00000217315 COL17A1Q9UMD9 1497 aaPredicted RBP15.56■□□□□ 0.08
TM9SF4-201ENST00000217315 C14orf93Q9H972 538 aaKnown RBP15.56■□□□□ 0.08
TM9SF4-201ENST00000217315 LMOD3Q0VAK6 560 aa15.55■□□□□ 0.08
TM9SF4-201ENST00000217315 PRKAR2BP31323 418 aa15.55■□□□□ 0.08
TM9SF4-201ENST00000217315 ANKRD45Q5TZF3 282 aa15.55■□□□□ 0.08
TM9SF4-201ENST00000217315 TRHP20396 242 aaPredicted RBP15.54■□□□□ 0.08
TM9SF4-201ENST00000217315 WDR63Q8IWG1 891 aa15.54■□□□□ 0.08
TM9SF4-201ENST00000217315 CARD14Q9BXL6 1004 aa15.54■□□□□ 0.08
TM9SF4-201ENST00000217315 GZF1Q9H116 711 aaPredicted RBP15.54■□□□□ 0.08
TM9SF4-201ENST00000217315 ASXL2Q76L83 1435 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms