RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 ST20-MTHFSA0A0A6YYL1 179 aa21.78■■□□□ 1.08
LAPTM4A-201ENST00000175091 PIK3C2GO75747 1445 aa21.76■■□□□ 1.07
LAPTM4A-201ENST00000175091 SETBP1Q9Y6X0 1596 aa21.75■■□□□ 1.07
LAPTM4A-201ENST00000175091 SCAF11Q99590 1463 aaKnown RBP21.75■■□□□ 1.07
LAPTM4A-201ENST00000175091 SLC52A1Q9NWF4 448 aa21.74■■□□□ 1.07
LAPTM4A-201ENST00000175091 RPGRIP1LQ68CZ1 1315 aa21.74■■□□□ 1.07
LAPTM4A-201ENST00000175091 ADGRF5Q8IZF2 1346 aa21.74■■□□□ 1.07
LAPTM4A-201ENST00000175091 ANP32CO43423 234 aa21.74■■□□□ 1.07
LAPTM4A-201ENST00000175091 DNAJC5Q9H3Z4 198 aa21.73■■□□□ 1.07
LAPTM4A-201ENST00000175091 CHGAP10645 457 aaKnown RBP21.71■■□□□ 1.07
LAPTM4A-201ENST00000175091 MYO3AQ8NEV4 1616 aa21.7■■□□□ 1.07
LAPTM4A-201ENST00000175091 TRHP20396 242 aaPredicted RBP21.7■■□□□ 1.06
LAPTM4A-201ENST00000175091 IDI1Q13907 227 aa21.7■■□□□ 1.06
LAPTM4A-201ENST00000175091 MLECQ14165 292 aa21.69■■□□□ 1.06
LAPTM4A-201ENST00000175091 TESK2Q96S53 571 aa21.69■■□□□ 1.06
LAPTM4A-201ENST00000175091 ADGRB1O14514 1584 aa21.68■■□□□ 1.06
LAPTM4A-201ENST00000175091 FBXO31Q5XUX0 539 aaPredicted RBP21.68■■□□□ 1.06
LAPTM4A-201ENST00000175091 ZFYVE9O95405 1425 aa21.67■■□□□ 1.06
LAPTM4A-201ENST00000175091 CCER2I3L3R5 266 aa21.66■■□□□ 1.06
LAPTM4A-201ENST00000175091 EIF3AQ14152 1382 aaKnown RBP21.66■■□□□ 1.06
LAPTM4A-201ENST00000175091 CFAP70Q5T0N1 1121 aa21.65■■□□□ 1.06
LAPTM4A-201ENST00000175091 YTHDC1Q96MU7 727 aaKnown RBP21.65■■□□□ 1.06
LAPTM4A-201ENST00000175091 DISP3Q9P2K9 1392 aa21.65■■□□□ 1.06
LAPTM4A-201ENST00000175091 ZMYM3Q14202 1370 aa21.63■■□□□ 1.05
LAPTM4A-201ENST00000175091 KDM5AP29375 1690 aaKnown RBP21.62■■□□□ 1.05
LAPTM4A-201ENST00000175091 FER1L4A9Z1Z3 1794 aa21.62■■□□□ 1.05
LAPTM4A-201ENST00000175091 CENPBP07199 599 aaPredicted RBP21.62■■□□□ 1.05
LAPTM4A-201ENST00000175091 A2ML1A8K2U0 1454 aa21.61■■□□□ 1.05
LAPTM4A-201ENST00000175091 POLR3GLQ9BT43 218 aa21.6■■□□□ 1.05
LAPTM4A-201ENST00000175091 ESF1Q9H501 851 aaKnown RBP21.59■■□□□ 1.05
LAPTM4A-201ENST00000175091 C14orf93Q9H972 538 aaKnown RBP21.59■■□□□ 1.05
LAPTM4A-201ENST00000175091 VGFO15240 615 aaPredicted RBP21.59■■□□□ 1.05
LAPTM4A-201ENST00000175091 ARHGEF28Q8N1W1 1705 aaKnown RBP21.58■■□□□ 1.05
LAPTM4A-201ENST00000175091 ASXL1Q8IXJ9 1541 aa21.58■■□□□ 1.04
LAPTM4A-201ENST00000175091 C3P01024 1663 aa21.58■■□□□ 1.04
LAPTM4A-201ENST00000175091 TMF1P82094 1093 aa21.57■■□□□ 1.04
LAPTM4A-201ENST00000175091 MYOM1P52179 1685 aa21.57■■□□□ 1.04
LAPTM4A-201ENST00000175091 QRICH2Q9H0J4 1663 aa21.57■■□□□ 1.04
LAPTM4A-201ENST00000175091 PRKRIP1Q9H875 184 aaPredicted RBP21.56■■□□□ 1.04
LAPTM4A-201ENST00000175091 SBNO2Q9Y2G9 1366 aa21.55■■□□□ 1.04
LAPTM4A-201ENST00000175091 UBR1Q8IWV7 1749 aa21.55■■□□□ 1.04
LAPTM4A-201ENST00000175091 SETD1AO15047 1707 aaKnown RBP21.53■■□□□ 1.04
LAPTM4A-201ENST00000175091 TNRQ92752 1358 aa21.53■■□□□ 1.04
LAPTM4A-201ENST00000175091 NUTM2DQ5VT03 806 aaPredicted RBP21.51■■□□□ 1.03
LAPTM4A-201ENST00000175091 ALKQ9UM73 1620 aa21.5■■□□□ 1.03
LAPTM4A-201ENST00000175091 RIMS2Q9UQ26 1411 aa21.49■■□□□ 1.03
LAPTM4A-201ENST00000175091 STAG3Q9UJ98 1225 aa21.48■■□□□ 1.03
LAPTM4A-201ENST00000175091 NRXN3Q9Y4C0 1643 aa21.48■■□□□ 1.03
LAPTM4A-201ENST00000175091 NLRP1Q9C000 1473 aa21.48■■□□□ 1.03
LAPTM4A-201ENST00000175091 SLC24A1O60721 1099 aa21.46■■□□□ 1.03
LAPTM4A-201ENST00000175091 CDCA8Q53HL2 280 aa21.46■■□□□ 1.03
LAPTM4A-201ENST00000175091 CENPJQ9HC77 1338 aaPredicted RBP21.46■■□□□ 1.03
LAPTM4A-201ENST00000175091 TMEM132EQ6IEE7 984 aa21.45■■□□□ 1.02
LAPTM4A-201ENST00000175091 KTN1Q86UP2 1357 aaKnown RBP21.44■■□□□ 1.02
LAPTM4A-201ENST00000175091 PTPRMP28827 1452 aa21.43■■□□□ 1.02
LAPTM4A-201ENST00000175091 TRAK1Q9UPV9 953 aa21.43■■□□□ 1.02
LAPTM4A-201ENST00000175091 RIMS1Q86UR5 1692 aaKnown RBP21.41■■□□□ 1.02
LAPTM4A-201ENST00000175091 PER1O15534 1290 aaPredicted RBP21.41■■□□□ 1.02
LAPTM4A-201ENST00000175091 YTHDC2Q9H6S0 1430 aaKnown RBP21.4■■□□□ 1.02
LAPTM4A-201ENST00000175091 TULP4Q9NRJ4 1543 aa21.39■■□□□ 1.02
LAPTM4A-201ENST00000175091 ADAMTSL3P82987 1691 aa21.39■■□□□ 1.01
LAPTM4A-201ENST00000175091 TMEM2Q9UHN6 1383 aa21.38■■□□□ 1.01
LAPTM4A-201ENST00000175091 CCDC184Q52MB2 194 aa21.38■■□□□ 1.01
LAPTM4A-201ENST00000175091 PARD3Q8TEW0 1356 aa21.37■■□□□ 1.01
LAPTM4A-201ENST00000175091 DLC1Q96QB1 1528 aa21.37■■□□□ 1.01
LAPTM4A-201ENST00000175091 KNDC1Q76NI1 1749 aa21.37■■□□□ 1.01
LAPTM4A-201ENST00000175091 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.37■■□□□ 1.01
LAPTM4A-201ENST00000175091 PANK3Q9H999 370 aa21.37■■□□□ 1.01
LAPTM4A-201ENST00000175091 CEBPAP49715 358 aaPredicted RBP21.36■■□□□ 1.01
LAPTM4A-201ENST00000175091 SLIT1O75093 1534 aa21.34■■□□□ 1.01
LAPTM4A-201ENST00000175091 RALBP1Q15311 655 aa21.34■■□□□ 1.01
LAPTM4A-201ENST00000175091 MRS2Q9HD23 443 aa21.34■■□□□ 1.01
LAPTM4A-201ENST00000175091 ARHGAP23Q9P227 1491 aa21.33■■□□□ 1
LAPTM4A-201ENST00000175091 MYBBP1AQ9BQG0 1328 aaKnown RBP21.31■■□□□ 1
LAPTM4A-201ENST00000175091 SENP3Q9H4L4 574 aaPredicted RBP21.31■■□□□ 1
LAPTM4A-201ENST00000175091 ZNF142P52746 1687 aaPredicted RBP21.3■■□□□ 1
LAPTM4A-201ENST00000175091 LRPPRCP42704 1394 aaKnown RBP21.3■■□□□ 1
LAPTM4A-201ENST00000175091 CEP170BQ9Y4F5 1589 aaPredicted RBP21.3■■□□□ 1
LAPTM4A-201ENST00000175091 HDGFP51858 240 aaKnown RBP21.29■■□□□ 1
LAPTM4A-201ENST00000175091 CNGB1Q14028 1251 aaPredicted RBP21.29■■□□□ 1
LAPTM4A-201ENST00000175091 CPS1P31327 1500 aa21.28■■□□□ 1
LAPTM4A-201ENST00000175091 BRD4O60885 1362 aaPredicted RBP21.28■■□□□ 1
LAPTM4A-201ENST00000175091 STK26Q9P289 416 aa21.28■■□□□ 1
LAPTM4A-201ENST00000175091 PLEKHG1Q9ULL1 1385 aa21.27■■□□□ 1
LAPTM4A-201ENST00000175091 USP32Q8NFA0 1604 aa21.27■■□□□ 1
LAPTM4A-201ENST00000175091 PUS7Q96PZ0 661 aaKnown RBP21.27■■□□□ 1
LAPTM4A-201ENST00000175091 NPC1L1Q9UHC9 1359 aa21.27■■□□□ 1
LAPTM4A-201ENST00000175091 TECPR2O15040 1411 aa21.27■■□□□ 1
LAPTM4A-201ENST00000175091 ADAMTS13Q76LX8 1427 aa21.27■■□□□ 1
LAPTM4A-201ENST00000175091 EVC2Q86UK5 1308 aa21.26■□□□□ 0.99
LAPTM4A-201ENST00000175091 ABCC11Q96J66 1382 aa21.26■□□□□ 0.99
LAPTM4A-201ENST00000175091 METP08581 1390 aa21.25■□□□□ 0.99
LAPTM4A-201ENST00000175091 AMER1Q5JTC6 1135 aaPredicted RBP21.24■□□□□ 0.99
LAPTM4A-201ENST00000175091 PRAM1Q96QH2 718 aa21.24■□□□□ 0.99
LAPTM4A-201ENST00000175091 KNSTRNQ9Y448 316 aa21.24■□□□□ 0.99
LAPTM4A-201ENST00000175091 MED14O60244 1454 aa21.24■□□□□ 0.99
LAPTM4A-201ENST00000175091 CC2D1BQ5T0F9 858 aaKnown RBP21.23■□□□□ 0.99
LAPTM4A-201ENST00000175091 SCAF1Q9H7N4 1312 aaKnown RBP21.22■□□□□ 0.99
LAPTM4A-201ENST00000175091 NLRP13Q86W25 1043 aa21.22■□□□□ 0.99
LAPTM4A-201ENST00000175091 DIP2AQ14689 1571 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms