RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 WASHC2CQ9Y4E1 1318 aa35.34■■■■□ 3.25
RTN4R-201ENST00000043402 CFAP70Q5T0N1 1121 aa35.33■■■■□ 3.25
RTN4R-201ENST00000043402 RICTORQ6R327 1708 aa35.33■■■■□ 3.25
RTN4R-201ENST00000043402 DIP2CQ9Y2E4 1556 aa35.33■■■■□ 3.25
RTN4R-201ENST00000043402 ABCC3O15438 1527 aa35.32■■■■□ 3.25
RTN4R-201ENST00000043402 ADGRB3O60242 1522 aa35.32■■■■□ 3.24
RTN4R-201ENST00000043402 IRX6P78412 446 aaPredicted RBP35.31■■■■□ 3.24
RTN4R-201ENST00000043402 NLRP13Q86W25 1043 aa35.3■■■■□ 3.24
RTN4R-201ENST00000043402 CC2D1BQ5T0F9 858 aaKnown RBP35.28■■■■□ 3.24
RTN4R-201ENST00000043402 NRXN1Q9ULB1 1477 aa35.28■■■■□ 3.24
RTN4R-201ENST00000043402 GLI2P10070 1586 aa35.25■■■■□ 3.23
RTN4R-201ENST00000043402 RIMBP3CA6NJZ7 1639 aa35.25■■■■□ 3.23
RTN4R-201ENST00000043402 RIMBP3BA6NNM3 1639 aa35.25■■■■□ 3.23
RTN4R-201ENST00000043402 RIMBP3Q9UFD9 1639 aa35.25■■■■□ 3.23
RTN4R-201ENST00000043402 EIF3AQ14152 1382 aaKnown RBP35.25■■■■□ 3.23
RTN4R-201ENST00000043402 SENP3-EIF4A1A0A087X0R7 540 aa35.24■■■■□ 3.23
RTN4R-201ENST00000043402 CAMSAP1Q5T5Y3 1602 aa35.23■■■■□ 3.23
RTN4R-201ENST00000043402 NOS1P29475 1434 aa35.23■■■■□ 3.23
RTN4R-201ENST00000043402 SMG6Q86US8 1419 aaKnown RBP35.23■■■■□ 3.23
RTN4R-201ENST00000043402 CHGAP10645 457 aaKnown RBP35.23■■■■□ 3.23
RTN4R-201ENST00000043402 YEATS2Q9ULM3 1422 aa35.21■■■■□ 3.23
RTN4R-201ENST00000043402 SIGLEC1Q9BZZ2 1709 aa35.21■■■■□ 3.23
RTN4R-201ENST00000043402 TSHZ2Q9NRE2 1034 aa35.2■■■■□ 3.23
RTN4R-201ENST00000043402 CDCA8Q53HL2 280 aa35.2■■■■□ 3.22
RTN4R-201ENST00000043402 SYNMO15061 1565 aa35.18■■■■□ 3.22
RTN4R-201ENST00000043402 PPLO60437 1756 aa35.18■■■■□ 3.22
RTN4R-201ENST00000043402 MYOM1P52179 1685 aa35.16■■■■□ 3.22
RTN4R-201ENST00000043402 NUDCQ9Y266 331 aa35.15■■■■□ 3.22
RTN4R-201ENST00000043402 PIK3C2GO75747 1445 aa35.12■■■■□ 3.21
RTN4R-201ENST00000043402 FAM69CQ0P6D2 419 aa35.11■■■■□ 3.21
RTN4R-201ENST00000043402 ERICH6BQ5W0A0 696 aa35.11■■■■□ 3.21
RTN4R-201ENST00000043402 ERVK-7P63135 1459 aa35.1■■■■□ 3.21
RTN4R-201ENST00000043402 KDM5AP29375 1690 aaKnown RBP35.1■■■■□ 3.21
RTN4R-201ENST00000043402 PIK3C2BO00750 1634 aa35.1■■■■□ 3.21
RTN4R-201ENST00000043402 KNSTRNQ9Y448 316 aa35.1■■■■□ 3.21
RTN4R-201ENST00000043402 SETBP1Q9Y6X0 1596 aa35.09■■■■□ 3.21
RTN4R-201ENST00000043402 AMER1Q5JTC6 1135 aaPredicted RBP35.09■■■■□ 3.21
RTN4R-201ENST00000043402 DIP2BQ9P265 1576 aa35.09■■■■□ 3.21
RTN4R-201ENST00000043402 ARHGAP31Q2M1Z3 1444 aa35.07■■■■□ 3.21
RTN4R-201ENST00000043402 MYO3AQ8NEV4 1616 aa35.07■■■■□ 3.2
RTN4R-201ENST00000043402 RPGRIP1LQ68CZ1 1315 aa35.06■■■■□ 3.2
RTN4R-201ENST00000043402 C14orf93Q9H972 538 aaKnown RBP35.06■■■■□ 3.2
RTN4R-201ENST00000043402 ZC3H13Q5T200 1668 aaKnown RBP35.06■■■■□ 3.2
RTN4R-201ENST00000043402 SLC24A1O60721 1099 aa35.03■■■■□ 3.2
RTN4R-201ENST00000043402 ADGRB1O14514 1584 aa35.02■■■■□ 3.2
RTN4R-201ENST00000043402 ZMYM4Q5VZL5 1548 aa35.02■■■■□ 3.2
RTN4R-201ENST00000043402 ASXL1Q8IXJ9 1541 aa35.01■■■■□ 3.19
RTN4R-201ENST00000043402 SBNO2Q9Y2G9 1366 aa35■■■■□ 3.19
RTN4R-201ENST00000043402 TSPOAP1O95153 1857 aa34.99■■■■□ 3.19
RTN4R-201ENST00000043402 RNF123Q5XPI4 1314 aa34.98■■■■□ 3.19
RTN4R-201ENST00000043402 PPP4R2Q9NY27 417 aa34.98■■■■□ 3.19
RTN4R-201ENST00000043402 PPP2R1AP30153 589 aa34.97■■■■□ 3.19
RTN4R-201ENST00000043402 CENPJQ9HC77 1338 aaPredicted RBP34.97■■■■□ 3.19
RTN4R-201ENST00000043402 IDI1Q13907 227 aa34.97■■■■□ 3.19
RTN4R-201ENST00000043402 TRAK1Q9UPV9 953 aa34.97■■■■□ 3.19
RTN4R-201ENST00000043402 NEXMIFQ5QGS0 1516 aa34.96■■■■□ 3.19
RTN4R-201ENST00000043402 TMEM132EQ6IEE7 984 aa34.96■■■■□ 3.19
RTN4R-201ENST00000043402 INSRP06213 1382 aa34.96■■■■□ 3.19
RTN4R-201ENST00000043402 BLMP54132 1417 aaPredicted RBP34.95■■■■□ 3.19
RTN4R-201ENST00000043402 NUTM2DQ5VT03 806 aaPredicted RBP34.94■■■■□ 3.18
RTN4R-201ENST00000043402 NPC1L1Q9UHC9 1359 aa34.94■■■■□ 3.18
RTN4R-201ENST00000043402 SALL2Q9Y467 1007 aaPredicted RBP34.93■■■■□ 3.18
RTN4R-201ENST00000043402 PREX1Q8TCU6 1659 aa34.89■■■■□ 3.18
RTN4R-201ENST00000043402 VGFO15240 615 aaPredicted RBP34.89■■■■□ 3.18
RTN4R-201ENST00000043402 QRICH2Q9H0J4 1663 aa34.89■■■■□ 3.18
RTN4R-201ENST00000043402 CARD14Q9BXL6 1004 aa34.89■■■■□ 3.18
RTN4R-201ENST00000043402 SLC52A1Q9NWF4 448 aa34.89■■■■□ 3.18
RTN4R-201ENST00000043402 ADAMTS8Q9UP79 889 aa34.85■■■■□ 3.17
RTN4R-201ENST00000043402 MYO5BQ9ULV0 1848 aa34.85■■■■□ 3.17
RTN4R-201ENST00000043402 PDE3BQ13370 1112 aa34.82■■■■□ 3.16
RTN4R-201ENST00000043402 B4GALNT3Q6L9W6 998 aa34.81■■■■□ 3.16
RTN4R-201ENST00000043402 TMEM131LA2VDJ0 1609 aa34.81■■■■□ 3.16
RTN4R-201ENST00000043402 FBXO31Q5XUX0 539 aaPredicted RBP34.8■■■■□ 3.16
RTN4R-201ENST00000043402 ZFYVE9O95405 1425 aa34.8■■■■□ 3.16
RTN4R-201ENST00000043402 MYT1Q01538 1121 aa34.79■■■■□ 3.16
RTN4R-201ENST00000043402 REREQ9P2R6 1566 aa34.78■■■■□ 3.16
RTN4R-201ENST00000043402 CDCA7LQ96GN5 454 aa34.78■■■■□ 3.16
RTN4R-201ENST00000043402 ARHGEF28Q8N1W1 1705 aaKnown RBP34.77■■■■□ 3.16
RTN4R-201ENST00000043402 AGLP35573 1532 aa34.74■■■■□ 3.15
RTN4R-201ENST00000043402 WDR43Q15061 677 aaKnown RBP eCLIP34.73■■■■□ 3.15
RTN4R-201ENST00000043402 SLC12A5Q9H2X9 1139 aa34.73■■■■□ 3.15
RTN4R-201ENST00000043402 RCAN3Q9UKA8 241 aa34.69■■■■□ 3.14
RTN4R-201ENST00000043402 SENP3Q9H4L4 574 aaPredicted RBP34.69■■■■□ 3.14
RTN4R-201ENST00000043402 TULP4Q9NRJ4 1543 aa34.67■■■■□ 3.14
RTN4R-201ENST00000043402 KIF13AQ9H1H9 1805 aa34.67■■■■□ 3.14
RTN4R-201ENST00000043402 NSD3Q9BZ95 1437 aa34.66■■■■□ 3.14
RTN4R-201ENST00000043402 PPP6R1Q9UPN7 881 aa34.66■■■■□ 3.14
RTN4R-201ENST00000043402 RBM19Q9Y4C8 960 aaKnown RBP34.66■■■■□ 3.14
RTN4R-201ENST00000043402 CLTCQ00610 1675 aaKnown RBP34.65■■■■□ 3.14
RTN4R-201ENST00000043402 RRP1P56182 461 aaKnown RBP34.64■■■■□ 3.14
RTN4R-201ENST00000043402 EVC2Q86UK5 1308 aa34.62■■■■□ 3.13
RTN4R-201ENST00000043402 PLEKHH1Q9ULM0 1364 aa34.62■■■■□ 3.13
RTN4R-201ENST00000043402 PUS7Q96PZ0 661 aaKnown RBP34.61■■■■□ 3.13
RTN4R-201ENST00000043402 STK26Q9P289 416 aa34.6■■■■□ 3.13
RTN4R-201ENST00000043402 SAFB2Q14151 953 aaKnown RBP eCLIP34.59■■■■□ 3.13
RTN4R-201ENST00000043402 MLECQ14165 292 aa34.57■■■■□ 3.12
RTN4R-201ENST00000043402 ZNF521Q96K83 1311 aa34.56■■■■□ 3.12
RTN4R-201ENST00000043402 CABP2Q9NPB3 220 aa34.55■■■■□ 3.12
RTN4R-201ENST00000043402 PTPRMP28827 1452 aa34.55■■■■□ 3.12
RTN4R-201ENST00000043402 ARHGEF40Q8TER5 1519 aa34.55■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms