RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Pibf1E9Q6K3 756 aa19.93■□□□□ 0.78
Upf1-202ENSMUST00000215817 Lmtk2Q3TYD6 1471 aa19.93■□□□□ 0.78
Upf1-202ENSMUST00000215817 Atp7aQ64430 1491 aa19.92■□□□□ 0.78
Upf1-202ENSMUST00000215817 Dennd4bQ3U1Y4 1499 aa19.92■□□□□ 0.78
Upf1-202ENSMUST00000215817 CrbnQ8C7D2 445 aa19.92■□□□□ 0.78
Upf1-202ENSMUST00000215817 Slc52a2Q9D8F3 450 aa19.92■□□□□ 0.78
Upf1-202ENSMUST00000215817 Sirt1Q923E4 737 aa19.9■□□□□ 0.78
Upf1-202ENSMUST00000215817 NpatQ8BMA5 1420 aa19.89■□□□□ 0.78
Upf1-202ENSMUST00000215817 FanciQ8K368 1330 aa19.89■□□□□ 0.77
Upf1-202ENSMUST00000215817 Ddx54Q8K4L0 874 aaKnown RBP19.88■□□□□ 0.77
Upf1-202ENSMUST00000215817 Znf518aB2RRF6 1478 aaKnown RBP19.88■□□□□ 0.77
Upf1-202ENSMUST00000215817 Dnmt1P13864 1620 aaKnown RBP19.87■□□□□ 0.77
Upf1-202ENSMUST00000215817 Cfap74Q3UY96 1578 aa19.87■□□□□ 0.77
Upf1-202ENSMUST00000215817 Mak16Q8BGS0 296 aaKnown RBP19.86■□□□□ 0.77
Upf1-202ENSMUST00000215817 Q3UJC8 639 aa19.86■□□□□ 0.77
Upf1-202ENSMUST00000215817 TatQ8QZR1 454 aa19.85■□□□□ 0.77
Upf1-202ENSMUST00000215817 Gli2Q0VGT2 1544 aa19.85■□□□□ 0.77
Upf1-202ENSMUST00000215817 Peg3Q3URU2 1571 aa19.84■□□□□ 0.77
Upf1-202ENSMUST00000215817 ArxO35085 564 aa19.84■□□□□ 0.77
Upf1-202ENSMUST00000215817 NudcO35685 332 aaKnown RBP19.84■□□□□ 0.77
Upf1-202ENSMUST00000215817 Asxl2Q8BZ32 1370 aa19.84■□□□□ 0.77
Upf1-202ENSMUST00000215817 Gm10563F6WIE4 79 aa19.83■□□□□ 0.77
Upf1-202ENSMUST00000215817 GnpatP98192 678 aa19.83■□□□□ 0.77
Upf1-202ENSMUST00000215817 DroshaQ5HZJ0 1373 aaKnown RBP19.82■□□□□ 0.76
Upf1-202ENSMUST00000215817 Tmco5bQ80X59 307 aa19.82■□□□□ 0.76
Upf1-202ENSMUST00000215817 GsdmaQ9EST1 446 aa19.81■□□□□ 0.76
Upf1-202ENSMUST00000215817 Esx1O88933 382 aa19.81■□□□□ 0.76
Upf1-202ENSMUST00000215817 Ppp4r2Q0VGB7 417 aa19.81■□□□□ 0.76
Upf1-202ENSMUST00000215817 Stk31Q99MW1 1018 aa19.81■□□□□ 0.76
Upf1-202ENSMUST00000215817 Q3TQI7 289 aaKnown RBP19.81■□□□□ 0.76
Upf1-202ENSMUST00000215817 Kdm3bQ6ZPY7 1562 aa19.8■□□□□ 0.76
Upf1-202ENSMUST00000215817 Zranb1Q7M760 708 aa19.79■□□□□ 0.76
Upf1-202ENSMUST00000215817 Synj2Q9D2G5 1434 aa19.79■□□□□ 0.76
Upf1-202ENSMUST00000215817 Smg6P61406 1418 aaKnown RBP19.78■□□□□ 0.76
Upf1-202ENSMUST00000215817 Rpgrip1lQ8CG73 1264 aa19.78■□□□□ 0.76
Upf1-202ENSMUST00000215817 Rprd2Q6NXI6 1469 aaKnown RBP19.77■□□□□ 0.76
Upf1-202ENSMUST00000215817 Tmem94Q7TSH8 1360 aa19.76■□□□□ 0.75
Upf1-202ENSMUST00000215817 Yeats2Q3TUF7 1407 aa19.75■□□□□ 0.75
Upf1-202ENSMUST00000215817 Lrrc9Q8CDN9 1456 aa19.75■□□□□ 0.75
Upf1-202ENSMUST00000215817 Ksr2Q3UVC0 959 aa19.75■□□□□ 0.75
Upf1-202ENSMUST00000215817 Q7TT23 1179 aa19.74■□□□□ 0.75
Upf1-202ENSMUST00000215817 Cfap65Q3V0B4 1847 aa19.73■□□□□ 0.75
Upf1-202ENSMUST00000215817 Adgrl2Q8JZZ7 1487 aa19.73■□□□□ 0.75
Upf1-202ENSMUST00000215817 Znf330Q922H9 316 aa19.73■□□□□ 0.75
Upf1-202ENSMUST00000215817 Armcx1Q9CX83 456 aa19.72■□□□□ 0.75
Upf1-202ENSMUST00000215817 Mroh2aD3Z750 1679 aa19.72■□□□□ 0.75
Upf1-202ENSMUST00000215817 Gm10471E9Q1C7 252 aa19.71■□□□□ 0.75
Upf1-202ENSMUST00000215817 Acsbg1Q99PU5 721 aa19.71■□□□□ 0.75
Upf1-202ENSMUST00000215817 Rock1P70335 1354 aa19.71■□□□□ 0.75
Upf1-202ENSMUST00000215817 Gm21698A0A087WQP8 267 aa19.71■□□□□ 0.75
Upf1-202ENSMUST00000215817 Gm21671G3UY31 267 aa19.71■□□□□ 0.75
Upf1-202ENSMUST00000215817 Kiaa1551Q5DTW7 1521 aa19.7■□□□□ 0.74
Upf1-202ENSMUST00000215817 Polr3aB2RXC6 1390 aa19.7■□□□□ 0.74
Upf1-202ENSMUST00000215817 Dennd6aQ8BH65 605 aa19.7■□□□□ 0.74
Upf1-202ENSMUST00000215817 Pik3c2gO70167 1506 aa19.69■□□□□ 0.74
Upf1-202ENSMUST00000215817 Sf3b2Q3UJB0 878 aaKnown RBP19.69■□□□□ 0.74
Upf1-202ENSMUST00000215817 Zranb3Q6NZP1 1069 aa19.69■□□□□ 0.74
Upf1-202ENSMUST00000215817 Ciz1Q8VEH2 845 aa19.69■□□□□ 0.74
Upf1-202ENSMUST00000215817 Rwdd1Q9CQK7 243 aa19.68■□□□□ 0.74
Upf1-202ENSMUST00000215817 Naip6Q9JIB6 1403 aa19.67■□□□□ 0.74
Upf1-202ENSMUST00000215817 Naip5Q9R016 1403 aa19.67■□□□□ 0.74
Upf1-202ENSMUST00000215817 Ccdc9Q8VC31 543 aaKnown RBP19.66■□□□□ 0.74
Upf1-202ENSMUST00000215817 MpripP97434 1024 aa19.65■□□□□ 0.74
Upf1-202ENSMUST00000215817 Ppp2r1aQ76MZ3 589 aa19.65■□□□□ 0.74
Upf1-202ENSMUST00000215817 Kif16bB1AVY7 1312 aa19.65■□□□□ 0.74
Upf1-202ENSMUST00000215817 PrxO55103 1391 aa19.65■□□□□ 0.74
Upf1-202ENSMUST00000215817 Hsp90aa1P07901 733 aaKnown RBP19.64■□□□□ 0.74
Upf1-202ENSMUST00000215817 Asxl1P59598 1514 aa19.64■□□□□ 0.74
Upf1-202ENSMUST00000215817 Kdm6bQ5NCY0 1641 aa19.64■□□□□ 0.73
Upf1-202ENSMUST00000215817 Fam208aQ69ZR9 1610 aaKnown RBP19.64■□□□□ 0.73
Upf1-202ENSMUST00000215817 Prrc2bQ7TPM1 1486 aaKnown RBP19.64■□□□□ 0.73
Upf1-202ENSMUST00000215817 Wdr43Q6ZQL4 677 aaKnown RBP19.63■□□□□ 0.73
Upf1-202ENSMUST00000215817 Hfm1D3Z4R1 1434 aa19.63■□□□□ 0.73
Upf1-202ENSMUST00000215817 Fmnl2A2APV2 1086 aa19.63■□□□□ 0.73
Upf1-202ENSMUST00000215817 Chmp7Q8R1T1 451 aa19.63■□□□□ 0.73
Upf1-202ENSMUST00000215817 Gcc2Q8CHG3 1679 aa19.63■□□□□ 0.73
Upf1-202ENSMUST00000215817 SafbD3YXK2 937 aaKnown RBP19.62■□□□□ 0.73
Upf1-202ENSMUST00000215817 Gimap5Q8BWF2 308 aa19.62■□□□□ 0.73
Upf1-202ENSMUST00000215817 Dnajc5gQ8C632 165 aa19.62■□□□□ 0.73
Upf1-202ENSMUST00000215817 Gimap6Q8K349 305 aa19.61■□□□□ 0.73
Upf1-202ENSMUST00000215817 Apaf1O88879 1249 aa19.61■□□□□ 0.73
Upf1-202ENSMUST00000215817 Zpr1Q62384 459 aa19.61■□□□□ 0.73
Upf1-202ENSMUST00000215817 Camsap2Q8C1B1 1461 aa19.61■□□□□ 0.73
Upf1-202ENSMUST00000215817 PnisrA2AJT4 805 aaKnown RBP19.6■□□□□ 0.73
Upf1-202ENSMUST00000215817 Zfyve16Q80U44 1528 aa19.59■□□□□ 0.73
Upf1-202ENSMUST00000215817 Dmrt2Q8BG36 561 aa19.59■□□□□ 0.73
Upf1-202ENSMUST00000215817 Farp2Q91VS8 1065 aa19.59■□□□□ 0.73
Upf1-202ENSMUST00000215817 Plekhg5Q66T02 1073 aa19.58■□□□□ 0.73
Upf1-202ENSMUST00000215817 Talpid3E9PV87 1520 aa19.58■□□□□ 0.72
Upf1-202ENSMUST00000215817 PtprgQ05909 1442 aa19.58■□□□□ 0.72
Upf1-202ENSMUST00000215817 Ak9G3UYQ4 1894 aa19.57■□□□□ 0.72
Upf1-202ENSMUST00000215817 Fmn2Q9JL04 1578 aa19.56■□□□□ 0.72
Upf1-202ENSMUST00000215817 Dbr1Q923B1 550 aa19.56■□□□□ 0.72
Upf1-202ENSMUST00000215817 Col17a1Q07563 1470 aa19.56■□□□□ 0.72
Upf1-202ENSMUST00000215817 PrkcshO08795 521 aa19.56■□□□□ 0.72
Upf1-202ENSMUST00000215817 Fndc1E9Q043 1732 aa19.56■□□□□ 0.72
Upf1-202ENSMUST00000215817 Slc5a4bQ91ZP4 660 aa19.55■□□□□ 0.72
Upf1-202ENSMUST00000215817 Larp1bA0A0A6YXJ7 370 aaKnown RBP19.55■□□□□ 0.72
Upf1-202ENSMUST00000215817 AatkQ80YE4 1365 aa19.55■□□□□ 0.72
Upf1-202ENSMUST00000215817 Atp10aO54827 1508 aa19.55■□□□□ 0.72
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms