RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 Kdm2bQ6P1G2 1309 aa13.55□□□□□ -0.24
Pdlim5-209ENSMUST00000196908 Xrn1P97789 1719 aaKnown RBP13.54□□□□□ -0.24
Pdlim5-209ENSMUST00000196908 Cntnap1O54991 1385 aa13.54□□□□□ -0.24
Pdlim5-209ENSMUST00000196908 Asxl1P59598 1514 aa13.54□□□□□ -0.24
Pdlim5-209ENSMUST00000196908 Cdk11bP24788 784 aaKnown RBP13.53□□□□□ -0.24
Pdlim5-209ENSMUST00000196908 Pik3c2aQ61194 1686 aa13.53□□□□□ -0.24
Pdlim5-209ENSMUST00000196908 Ttll13A4Q9F6 804 aa13.52□□□□□ -0.25
Pdlim5-209ENSMUST00000196908 Zbtb7cQ8VCZ7 619 aa13.52□□□□□ -0.25
Pdlim5-209ENSMUST00000196908 Mbd5B1AYB6 1498 aa13.52□□□□□ -0.25
Pdlim5-209ENSMUST00000196908 Kif21bQ9QXL1 1668 aa13.52□□□□□ -0.25
Pdlim5-209ENSMUST00000196908 Prdm16A2A935 1275 aa13.51□□□□□ -0.25
Pdlim5-209ENSMUST00000196908 Rgs17Q9QZB0 210 aa13.5□□□□□ -0.25
Pdlim5-209ENSMUST00000196908 Chd2E9PZM4 1827 aaKnown RBP13.5□□□□□ -0.25
Pdlim5-209ENSMUST00000196908 Fmn2Q9JL04 1578 aa13.49□□□□□ -0.25
Pdlim5-209ENSMUST00000196908 Plch2A2AP18 1501 aa13.49□□□□□ -0.25
Pdlim5-209ENSMUST00000196908 Topbp1Q6ZQF0 1515 aa13.49□□□□□ -0.25
Pdlim5-209ENSMUST00000196908 MypopQ8R4U1 393 aa13.49□□□□□ -0.25
Pdlim5-209ENSMUST00000196908 Txndc2Q6P902 515 aa13.48□□□□□ -0.25
Pdlim5-209ENSMUST00000196908 Ggt6Q6PDE7 497 aa13.48□□□□□ -0.25
Pdlim5-209ENSMUST00000196908 Nhsl1Q8CAF4 1587 aa13.48□□□□□ -0.25
Pdlim5-209ENSMUST00000196908 PtprvP70289 1705 aa13.47□□□□□ -0.25
Pdlim5-209ENSMUST00000196908 Adgrb2Q8CGM1 1561 aa13.47□□□□□ -0.25
Pdlim5-209ENSMUST00000196908 Evi5lH3BKQ3 813 aa13.46□□□□□ -0.25
Pdlim5-209ENSMUST00000196908 SnphQ80U23 495 aa13.46□□□□□ -0.25
Pdlim5-209ENSMUST00000196908 Robo2Q7TPD3 1470 aa13.44□□□□□ -0.26
Pdlim5-209ENSMUST00000196908 Gm13695A2AK44 830 aa13.43□□□□□ -0.26
Pdlim5-209ENSMUST00000196908 Spag9Q58A65 1321 aaKnown RBP13.42□□□□□ -0.26
Pdlim5-209ENSMUST00000196908 Lrp6O88572 1613 aa13.4□□□□□ -0.26
Pdlim5-209ENSMUST00000196908 Hnrnpul2Q00PI9 745 aaKnown RBP13.4□□□□□ -0.26
Pdlim5-209ENSMUST00000196908 Adgrb3Q80ZF8 1522 aa13.39□□□□□ -0.27
Pdlim5-209ENSMUST00000196908 Fxr2Q9WVR4 673 aaKnown RBP13.39□□□□□ -0.27
Pdlim5-209ENSMUST00000196908 Col18a1P39061 1774 aa13.38□□□□□ -0.27
Pdlim5-209ENSMUST00000196908 P3h3Q8CG70 732 aa13.38□□□□□ -0.27
Pdlim5-209ENSMUST00000196908 Slain2Q8CI08 581 aa13.38□□□□□ -0.27
Pdlim5-209ENSMUST00000196908 Nwd1A6H603 1563 aa13.37□□□□□ -0.27
Pdlim5-209ENSMUST00000196908 Siglec1Q62230 1695 aa13.36□□□□□ -0.27
Pdlim5-209ENSMUST00000196908 Thsd7aQ69ZU6 1645 aa13.35□□□□□ -0.27
Pdlim5-209ENSMUST00000196908 Adamts7Q68SA9 1657 aa13.35□□□□□ -0.27
Pdlim5-209ENSMUST00000196908 ShprhQ7TPQ3 1674 aa13.35□□□□□ -0.27
Pdlim5-209ENSMUST00000196908 Fhad1A6PWD2 1420 aa13.35□□□□□ -0.27
Pdlim5-209ENSMUST00000196908 Ankrd36D3Z4K0 1415 aa13.35□□□□□ -0.27
Pdlim5-209ENSMUST00000196908 Eif2ak4Q9QZ05 1648 aa13.35□□□□□ -0.27
Pdlim5-209ENSMUST00000196908 Kdm5aQ3UXZ9 1690 aa13.34□□□□□ -0.27
Pdlim5-209ENSMUST00000196908 Myo5cE9Q1F5 1742 aa13.34□□□□□ -0.27
Pdlim5-209ENSMUST00000196908 Usp54Q8BL06 1588 aaKnown RBP13.34□□□□□ -0.27
Pdlim5-209ENSMUST00000196908 Psme1P97371 249 aa13.34□□□□□ -0.27
Pdlim5-209ENSMUST00000196908 Adgrl2Q8JZZ7 1487 aa13.34□□□□□ -0.27
Pdlim5-209ENSMUST00000196908 Arap3Q8R5G7 1538 aa13.34□□□□□ -0.27
Pdlim5-209ENSMUST00000196908 Setd1aE9PYH6 1716 aa13.33□□□□□ -0.27
Pdlim5-209ENSMUST00000196908 Mast1Q9R1L5 1570 aa13.33□□□□□ -0.28
Pdlim5-209ENSMUST00000196908 Naip1Q9QWK5 1403 aa13.33□□□□□ -0.28
Pdlim5-209ENSMUST00000196908 Prex1Q69ZK0 1650 aa13.32□□□□□ -0.28
Pdlim5-209ENSMUST00000196908 Lmtk2Q3TYD6 1471 aa13.32□□□□□ -0.28
Pdlim5-209ENSMUST00000196908 Fam71e1A1L3C1 212 aa13.32□□□□□ -0.28
Pdlim5-209ENSMUST00000196908 Znf526Q8BI66 675 aa13.32□□□□□ -0.28
Pdlim5-209ENSMUST00000196908 Abca17E9PX95 1733 aa13.31□□□□□ -0.28
Pdlim5-209ENSMUST00000196908 Bcl2l12Q9D3J3 255 aa13.31□□□□□ -0.28
Pdlim5-209ENSMUST00000196908 Akap12Q9WTQ5 1684 aa13.31□□□□□ -0.28
Pdlim5-209ENSMUST00000196908 Atf3Q60765 181 aa13.3□□□□□ -0.28
Pdlim5-209ENSMUST00000196908 Gjc2Q8BQU6 440 aa13.3□□□□□ -0.28
Pdlim5-209ENSMUST00000196908 Ybx3Q9JKB3 361 aaKnown RBP13.3□□□□□ -0.28
Pdlim5-209ENSMUST00000196908 Mtus2Q3UHD3 1353 aa13.3□□□□□ -0.28
Pdlim5-209ENSMUST00000196908 Tns3Q5SSZ5 1440 aa13.3□□□□□ -0.28
Pdlim5-209ENSMUST00000196908 IghaA0A0A6YXW6 389 aa13.28□□□□□ -0.28
Pdlim5-209ENSMUST00000196908 Ehmt2Q9Z148 1263 aaKnown RBP13.28□□□□□ -0.28
Pdlim5-209ENSMUST00000196908 Acin1Q9JIX8 1338 aaKnown RBP13.27□□□□□ -0.29
Pdlim5-209ENSMUST00000196908 Vps8Q0P5W1 1427 aa13.26□□□□□ -0.29
Pdlim5-209ENSMUST00000196908 Lmtk3Q5XJV6 1424 aa13.26□□□□□ -0.29
Pdlim5-209ENSMUST00000196908 Myo3aQ8K3H5 1613 aa13.26□□□□□ -0.29
Pdlim5-209ENSMUST00000196908 Kif13aQ9EQW7 1749 aa13.26□□□□□ -0.29
Pdlim5-209ENSMUST00000196908 Map3k10Q66L42 940 aa13.25□□□□□ -0.29
Pdlim5-209ENSMUST00000196908 Tmem131lQ3U3D7 1597 aa13.24□□□□□ -0.29
Pdlim5-209ENSMUST00000196908 Abcc10Q8R4P9 1501 aa13.24□□□□□ -0.29
Pdlim5-209ENSMUST00000196908 Pde4cQ3UEI1 686 aa13.24□□□□□ -0.29
Pdlim5-209ENSMUST00000196908 Itsn1Q9Z0R4 1714 aa13.24□□□□□ -0.29
Pdlim5-209ENSMUST00000196908 Skint5A7XUY5 1461 aa13.23□□□□□ -0.29
Pdlim5-209ENSMUST00000196908 Ssh2Q5SW75 1423 aa13.23□□□□□ -0.29
Pdlim5-209ENSMUST00000196908 Naip7Q9JIB3 1402 aa13.23□□□□□ -0.29
Pdlim5-209ENSMUST00000196908 Emilin2Q8K482 1074 aa13.23□□□□□ -0.29
Pdlim5-209ENSMUST00000196908 Zfp142G5E869 1843 aa13.23□□□□□ -0.29
Pdlim5-209ENSMUST00000196908 PalldQ9ET54 1408 aa13.22□□□□□ -0.29
Pdlim5-209ENSMUST00000196908 Ehbp1l1Q99MS7 1716 aa13.22□□□□□ -0.29
Pdlim5-209ENSMUST00000196908 Rprd2Q6NXI6 1469 aaKnown RBP13.22□□□□□ -0.29
Pdlim5-209ENSMUST00000196908 Abcc5Q9R1X5 1436 aa13.22□□□□□ -0.29
Pdlim5-209ENSMUST00000196908 Col22a1E9Q7P1 1613 aa13.21□□□□□ -0.3
Pdlim5-209ENSMUST00000196908 Tecpr2Q3UH45 1423 aa13.2□□□□□ -0.3
Pdlim5-209ENSMUST00000196908 Dapk1Q80YE7 1442 aa13.2□□□□□ -0.3
Pdlim5-209ENSMUST00000196908 Asxl2Q8BZ32 1370 aa13.2□□□□□ -0.3
Pdlim5-209ENSMUST00000196908 Jarid2Q62315 1234 aa13.19□□□□□ -0.3
Pdlim5-209ENSMUST00000196908 Plekhh2Q8C115 1491 aa13.18□□□□□ -0.3
Pdlim5-209ENSMUST00000196908 Ccdc6D3YZP9 469 aa13.18□□□□□ -0.3
Pdlim5-209ENSMUST00000196908 Cabp1Q9JLK7 227 aa13.18□□□□□ -0.3
Pdlim5-209ENSMUST00000196908 Lamc1P02468 1607 aaKnown RBP13.17□□□□□ -0.3
Pdlim5-209ENSMUST00000196908 Ttc21bQ0HA38 1315 aa13.17□□□□□ -0.3
Pdlim5-209ENSMUST00000196908 Eno4Q8C042 619 aa13.17□□□□□ -0.3
Pdlim5-209ENSMUST00000196908 Kif24Q6NWW5 1356 aa13.17□□□□□ -0.3
Pdlim5-209ENSMUST00000196908 Ylpm1Q9R0I7 1386 aaKnown RBP13.17□□□□□ -0.3
Pdlim5-209ENSMUST00000196908 Lrrc43Q3V0L5 667 aa13.16□□□□□ -0.3
Pdlim5-209ENSMUST00000196908 KdrP35918 1367 aa13.16□□□□□ -0.3
Pdlim5-209ENSMUST00000196908 Tmem94Q7TSH8 1360 aa13.16□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms