RNA–Protein interactions for RNA: ENSMUST00000190080.6

Trerf1-205, Transcript of Transcriptional-regulating factor 1, mousemouse

TSL 1 (best) BASIC

Gene Trerf1, Length 7,045 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1-205ENSMUST00000190080 Rab11fip3Q8CHD8 1047 aa11.26□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Gsto1O09131 240 aa11.26□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Nectin2P32507 530 aa11.26□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Arhgap5P97393 1501 aa11.26□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Atad2bE9Q166 1460 aaKnown RBP11.25□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Fnbp4Q6ZQ03 1031 aa11.25□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Ccdc43Q9CR29 222 aaKnown RBP11.25□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Cttnbp2B9EJA2 1648 aa11.25□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Zranb3Q6NZP1 1069 aa11.25□□□□□ -0.61
Trerf1-205ENSMUST00000190080 MycnP03966 462 aaKnown RBP11.25□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Nutm1Q8BHP2 1126 aa11.25□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Abl1P00520 1123 aa11.24□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Q8C5K5 320 aa11.24□□□□□ -0.61
Trerf1-205ENSMUST00000190080 TatQ8QZR1 454 aa11.24□□□□□ -0.61
Trerf1-205ENSMUST00000190080 CrcpO35427 148 aa11.24□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Fam184bQ0KK56 942 aa11.24□□□□□ -0.61
Trerf1-205ENSMUST00000190080 ChgaP26339 463 aaKnown RBP11.24□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Ylpm1Q9R0I7 1386 aaKnown RBP11.24□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Odf2A3KGV1 830 aaKnown RBP11.24□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Tpm4Q6IRU2 248 aa11.23□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Znf704Q9ERQ3 566 aa11.23□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Smg7Q5RJH6 1138 aaKnown RBP11.23□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Gsdma3Q5Y4Y6 464 aa11.23□□□□□ -0.61
Trerf1-205ENSMUST00000190080 SlkO54988 1233 aa11.23□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Fam193aQ8CGI1 1231 aaKnown RBP11.23□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Cyb5rlB1AS42 316 aa11.23□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Hmox1P14901 289 aa11.23□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Iqgap2Q3UQ44 1575 aa11.22□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Ric3Q8BPM6 367 aa11.22□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Kcnn1Q9EQR3 537 aa11.22□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Tpm3P21107 285 aaKnown RBP11.22□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Polr3gQ6NXY9 223 aa11.22□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Mphosph10Q810V0 681 aaKnown RBP11.22□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Urb2E9Q7L1 1524 aaKnown RBP11.21□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Esx1O88933 382 aa11.21□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Rad54l2Q99NG0 1466 aa11.21□□□□□ -0.61
Trerf1-205ENSMUST00000190080 Gm21698A0A087WQP8 267 aa11.21□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Gm21671G3UY31 267 aa11.21□□□□□ -0.62
Trerf1-205ENSMUST00000190080 MpripP97434 1024 aa11.21□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Sf3a1Q8K4Z5 791 aaKnown RBP11.21□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Cfdp1O88271 295 aaKnown RBP11.2□□□□□ -0.62
Trerf1-205ENSMUST00000190080 ArsiQ32KI9 573 aa11.2□□□□□ -0.62
Trerf1-205ENSMUST00000190080 RdxP26043 583 aaKnown RBP11.2□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Tpm2P58774 284 aa11.2□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Cgnl1Q6AW69 1298 aa11.2□□□□□ -0.62
Trerf1-205ENSMUST00000190080 NexnQ7TPW1 607 aa11.2□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Dapk1Q80YE7 1442 aa11.2□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Ipo9Q91YE6 1041 aa11.2□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Atp2b2Q9R0K7 1198 aa11.2□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Drc7Q6V3W6 876 aa11.2□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Map3k5O35099 1380 aa11.2□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Cnnm1Q0GA42 951 aa11.2□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Ccdc96Q9CR92 584 aa11.2□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Stk3Q9JI10 497 aa11.19□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Gabpb2P81069 414 aa11.19□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Atp6v1dP57746 247 aa11.19□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Nap1l3Q794H2 544 aa11.19□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Rock1P70335 1354 aa11.19□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Phactr2B1AVP0 632 aa11.19□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Map7d2A2AG50 781 aa11.18□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Rfx1P48377 963 aa11.18□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Puf60Q3UEB3 564 aaKnown RBP11.18□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Filip1lQ6P6L0 1131 aa11.18□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Zscan10Q3URR7 782 aa11.17□□□□□ -0.62
Trerf1-205ENSMUST00000190080 AcrbpQ3V140 540 aa11.17□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Gtf2f1Q3THK3 508 aaKnown RBP11.17□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Dmrt2Q8BG36 561 aa11.17□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Cplx1P63040 134 aa11.17□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Afap1Q80YS6 731 aa11.17□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Sv2bQ8BG39 683 aa11.17□□□□□ -0.62
Trerf1-205ENSMUST00000190080 March6Q6ZQ89 909 aa11.16□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Rbm25B2RY56 838 aaKnown RBP11.16□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Fkbp4P30416 458 aa11.16□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Speer4bQ9D9F7 267 aa11.16□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Zfp644E9QA22 1323 aa11.16□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Ripply1Q2WG77 201 aa11.16□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Rec8Q8C5S7 591 aa11.16□□□□□ -0.62
Trerf1-205ENSMUST00000190080 IkQ9Z1M8 557 aaKnown RBP11.15□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Pde4cQ3UEI1 686 aa11.15□□□□□ -0.62
Trerf1-205ENSMUST00000190080 St18Q80TY4 1045 aa11.15□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Rrp12Q6P5B0 1295 aaKnown RBP11.15□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Dennd6aQ8BH65 605 aa11.15□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Ell2Q3UKU1 639 aa11.15□□□□□ -0.62
Trerf1-205ENSMUST00000190080 TefQ9JLC6 301 aa11.15□□□□□ -0.62
Trerf1-205ENSMUST00000190080 Srek1Q8BZX4 494 aaKnown RBP11.15□□□□□ -0.63
Trerf1-205ENSMUST00000190080 Cux1P53564 1515 aa11.14□□□□□ -0.63
Trerf1-205ENSMUST00000190080 Cplx2P84086 134 aa11.14□□□□□ -0.63
Trerf1-205ENSMUST00000190080 Mex3cQ05A36 652 aaKnown RBP11.14□□□□□ -0.63
Trerf1-205ENSMUST00000190080 Trim30aP15533 496 aa11.13□□□□□ -0.63
Trerf1-205ENSMUST00000190080 Evc2Q8K1G2 1220 aa11.13□□□□□ -0.63
Trerf1-205ENSMUST00000190080 Smarca2Q6DIC0 1577 aa11.13□□□□□ -0.63
Trerf1-205ENSMUST00000190080 Me1P06801 572 aa11.13□□□□□ -0.63
Trerf1-205ENSMUST00000190080 Hnrnpul1Q8VDM6 859 aaKnown RBP11.13□□□□□ -0.63
Trerf1-205ENSMUST00000190080 Smg6P61406 1418 aaKnown RBP11.13□□□□□ -0.63
Trerf1-205ENSMUST00000190080 Utp3Q9JI13 469 aaKnown RBP11.13□□□□□ -0.63
Trerf1-205ENSMUST00000190080 Bicd2Q921C5 820 aa11.13□□□□□ -0.63
Trerf1-205ENSMUST00000190080 A0A0U1RNP2 1173 aa11.12□□□□□ -0.63
Trerf1-205ENSMUST00000190080 Bicdl1A0JNT9 577 aa11.12□□□□□ -0.63
Trerf1-205ENSMUST00000190080 Swt1Q9DBQ9 907 aa11.12□□□□□ -0.63
Trerf1-205ENSMUST00000190080 Gm21663A0A0G2JE01 267 aa11.12□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 39.5 ms