RNA–Protein interactions for RNA: ENSMUST00000190080.6

Trerf1-205, Transcript of Transcriptional-regulating factor 1, mousemouse

TSL 1 (best) BASIC

Gene Trerf1, Length 7,045 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1-205ENSMUST00000190080 Rhox8Q6VSS7 320 aa16.55■□□□□ 0.24
Trerf1-205ENSMUST00000190080 Ehmt2Q9Z148 1263 aaKnown RBP14.93□□□□□ -0.02
Trerf1-205ENSMUST00000190080 Esf1Q3V1V3 845 aaKnown RBP14.74□□□□□ -0.05
Trerf1-205ENSMUST00000190080 Cngb1E1AZ71 1325 aa14.73□□□□□ -0.05
Trerf1-205ENSMUST00000190080 Ccdc136Q3TVA9 1136 aa14.7□□□□□ -0.06
Trerf1-205ENSMUST00000190080 Ube2uB1AUC4 352 aa14.61□□□□□ -0.07
Trerf1-205ENSMUST00000190080 Zeb1Q64318 1117 aa14.56□□□□□ -0.08
Trerf1-205ENSMUST00000190080 Gab3Q8BSM5 595 aa14.46□□□□□ -0.09
Trerf1-205ENSMUST00000190080 Wdr66E9Q743 1299 aa14.42□□□□□ -0.1
Trerf1-205ENSMUST00000190080 Npm2Q80W85 207 aa14.4□□□□□ -0.1
Trerf1-205ENSMUST00000190080 Amer1Q7TS75 1132 aa14.33□□□□□ -0.12
Trerf1-205ENSMUST00000190080 Myt1lP97500 1187 aa14.31□□□□□ -0.12
Trerf1-205ENSMUST00000190080 Las1lA2BE28 776 aaKnown RBP14.26□□□□□ -0.13
Trerf1-205ENSMUST00000190080 Pelp1Q9DBD5 1123 aaKnown RBP14.25□□□□□ -0.13
Trerf1-205ENSMUST00000190080 Rpgrip1Q9EPQ2 1331 aa14.19□□□□□ -0.14
Trerf1-205ENSMUST00000190080 Trim41Q5NCC3 630 aa14.09□□□□□ -0.15
Trerf1-205ENSMUST00000190080 NischQ80TM9 1593 aa13.99□□□□□ -0.17
Trerf1-205ENSMUST00000190080 Il27Q8K3I6 234 aa13.91□□□□□ -0.18
Trerf1-205ENSMUST00000190080 UbtfP25976 765 aaKnown RBP13.84□□□□□ -0.19
Trerf1-205ENSMUST00000190080 Slc24a1Q91WD8 1130 aa13.8□□□□□ -0.2
Trerf1-205ENSMUST00000190080 Ttbk1Q6PCN3 1308 aa13.71□□□□□ -0.22
Trerf1-205ENSMUST00000190080 Ap3b1Q9Z1T1 1105 aa13.7□□□□□ -0.22
Trerf1-205ENSMUST00000190080 4930567H17RikQ3V0K5 233 aa13.68□□□□□ -0.22
Trerf1-205ENSMUST00000190080 Gm35339A0A140LHH9 1649 aa13.63□□□□□ -0.23
Trerf1-205ENSMUST00000190080 Abcc9P70170 1546 aa13.59□□□□□ -0.23
Trerf1-205ENSMUST00000190080 Neurod1Q60867 357 aa13.56□□□□□ -0.24
Trerf1-205ENSMUST00000190080 Os9Q8K2C7 672 aa13.52□□□□□ -0.24
Trerf1-205ENSMUST00000190080 CenpbP27790 599 aa13.51□□□□□ -0.25
Trerf1-205ENSMUST00000190080 Fam50aQ9WV03 339 aaKnown RBP13.49□□□□□ -0.25
Trerf1-205ENSMUST00000190080 Zcchc6Q5BLK4 1491 aaKnown RBP13.43□□□□□ -0.26
Trerf1-205ENSMUST00000190080 Zbtb7cQ8VCZ7 619 aa13.41□□□□□ -0.26
Trerf1-205ENSMUST00000190080 Ifnlr1Q8CGK5 535 aa13.41□□□□□ -0.26
Trerf1-205ENSMUST00000190080 4933416C03RikQ3V063 378 aa13.38□□□□□ -0.27
Trerf1-205ENSMUST00000190080 NefmP08553 848 aa13.33□□□□□ -0.28
Trerf1-205ENSMUST00000190080 Ppargc1bQ8VHJ7 1014 aa13.33□□□□□ -0.28
Trerf1-205ENSMUST00000190080 Stra8P70278 393 aa13.31□□□□□ -0.28
Trerf1-205ENSMUST00000190080 HrcG5E8J6 738 aa13.29□□□□□ -0.28
Trerf1-205ENSMUST00000190080 Eif5bQ05D44 1216 aaKnown RBP13.28□□□□□ -0.28
Trerf1-205ENSMUST00000190080 Acin1Q9JIX8 1338 aaKnown RBP13.28□□□□□ -0.28
Trerf1-205ENSMUST00000190080 Chic1Q8CBW7 227 aa13.27□□□□□ -0.28
Trerf1-205ENSMUST00000190080 NclP09405 707 aaKnown RBP13.27□□□□□ -0.29
Trerf1-205ENSMUST00000190080 Gm13697A2AK42 830 aa13.26□□□□□ -0.29
Trerf1-205ENSMUST00000190080 Plppr3Q7TPB0 716 aa13.26□□□□□ -0.29
Trerf1-205ENSMUST00000190080 Ccdc180J3QNE4 1664 aa13.23□□□□□ -0.29
Trerf1-205ENSMUST00000190080 NrdcQ8BHG1 1161 aa13.22□□□□□ -0.29
Trerf1-205ENSMUST00000190080 Hnrnpul2Q00PI9 745 aaKnown RBP13.18□□□□□ -0.3
Trerf1-205ENSMUST00000190080 Anp32bQ9EST5 272 aaKnown RBP13.18□□□□□ -0.3
Trerf1-205ENSMUST00000190080 Lmod2Q3UHZ5 550 aa13.15□□□□□ -0.3
Trerf1-205ENSMUST00000190080 Zbtb4Q5F293 982 aa13.14□□□□□ -0.31
Trerf1-205ENSMUST00000190080 Npm1Q61937 292 aaKnown RBP13.14□□□□□ -0.31
Trerf1-205ENSMUST00000190080 Atp1b4Q99ME6 356 aa13.11□□□□□ -0.31
Trerf1-205ENSMUST00000190080 Erich6D3Z6S9 713 aa13.09□□□□□ -0.31
Trerf1-205ENSMUST00000190080 NeflP08551 543 aa13.09□□□□□ -0.31
Trerf1-205ENSMUST00000190080 Rtl1Q7M732 1744 aa13.08□□□□□ -0.32
Trerf1-205ENSMUST00000190080 Fkbp15Q6P9Q6 1216 aaKnown RBP13.06□□□□□ -0.32
Trerf1-205ENSMUST00000190080 Prdm10Q3UTQ7 1184 aa13.06□□□□□ -0.32
Trerf1-205ENSMUST00000190080 Cdk11bP24788 784 aaKnown RBP13.05□□□□□ -0.32
Trerf1-205ENSMUST00000190080 Myt1Q8CFC2 1127 aa13.02□□□□□ -0.32
Trerf1-205ENSMUST00000190080 Gm13695A2AK44 830 aa12.99□□□□□ -0.33
Trerf1-205ENSMUST00000190080 Plekhg3Q4VAC9 1341 aa12.98□□□□□ -0.33
Trerf1-205ENSMUST00000190080 TonslQ6NZL6 1363 aa12.96□□□□□ -0.33
Trerf1-205ENSMUST00000190080 Nop58Q6DFW4 536 aaKnown RBP12.91□□□□□ -0.34
Trerf1-205ENSMUST00000190080 Polr3glQ8R0C0 218 aa12.85□□□□□ -0.35
Trerf1-205ENSMUST00000190080 Nlrp6Q91WS2 869 aa12.85□□□□□ -0.35
Trerf1-205ENSMUST00000190080 Mier1Q5UAK0 511 aa12.85□□□□□ -0.35
Trerf1-205ENSMUST00000190080 Mapk8ip2Q9ERE9 830 aa12.82□□□□□ -0.36
Trerf1-205ENSMUST00000190080 Tnnt3Q9QZ47 272 aa12.78□□□□□ -0.36
Trerf1-205ENSMUST00000190080 Pcgf6Q99NA9 353 aa12.78□□□□□ -0.36
Trerf1-205ENSMUST00000190080 Rangap1P46061 589 aaKnown RBP12.76□□□□□ -0.37
Trerf1-205ENSMUST00000190080 Ubl4bQ9CQ84 188 aa12.74□□□□□ -0.37
Trerf1-205ENSMUST00000190080 Supt5hO55201 1082 aaKnown RBP12.74□□□□□ -0.37
Trerf1-205ENSMUST00000190080 Safb2Q80YR5 991 aaKnown RBP12.72□□□□□ -0.37
Trerf1-205ENSMUST00000190080 DiexfQ8BTT6 772 aaKnown RBP12.71□□□□□ -0.37
Trerf1-205ENSMUST00000190080 ArxO35085 564 aa12.7□□□□□ -0.38
Trerf1-205ENSMUST00000190080 Eid3Q3V124 375 aa12.67□□□□□ -0.38
Trerf1-205ENSMUST00000190080 CatipB9EKE5 520 aa12.64□□□□□ -0.39
Trerf1-205ENSMUST00000190080 P3h3Q8CG70 732 aa12.63□□□□□ -0.39
Trerf1-205ENSMUST00000190080 DaxxO35613 739 aa12.62□□□□□ -0.39
Trerf1-205ENSMUST00000190080 Ythdc1E9Q5K9 736 aaKnown RBP12.6□□□□□ -0.39
Trerf1-205ENSMUST00000190080 Chic2Q9D9G3 165 aa12.6□□□□□ -0.39
Trerf1-205ENSMUST00000190080 Csrnp3P59055 597 aa12.58□□□□□ -0.39
Trerf1-205ENSMUST00000190080 Clip1Q922J3 1391 aa12.55□□□□□ -0.4
Trerf1-205ENSMUST00000190080 Lmod3E9QA62 571 aa12.53□□□□□ -0.4
Trerf1-205ENSMUST00000190080 Abcc8B2RUS7 1588 aa12.53□□□□□ -0.4
Trerf1-205ENSMUST00000190080 Brd4Q9ESU6 1400 aaKnown RBP12.49□□□□□ -0.41
Trerf1-205ENSMUST00000190080 Irx6Q9ER75 438 aa12.49□□□□□ -0.41
Trerf1-205ENSMUST00000190080 Rtl5Q5DTT4 599 aa12.49□□□□□ -0.41
Trerf1-205ENSMUST00000190080 Hdac5Q9Z2V6 1113 aa12.49□□□□□ -0.41
Trerf1-205ENSMUST00000190080 Rad21Q61550 635 aaKnown RBP12.48□□□□□ -0.41
Trerf1-205ENSMUST00000190080 ClspnQ80YR7 1315 aa12.45□□□□□ -0.42
Trerf1-205ENSMUST00000190080 Gm38655A0A286YDK6 273 aa12.45□□□□□ -0.42
Trerf1-205ENSMUST00000190080 Rb1cc1Q9ESK9 1588 aa12.44□□□□□ -0.42
Trerf1-205ENSMUST00000190080 MyclP10166 368 aa12.43□□□□□ -0.42
Trerf1-205ENSMUST00000190080 Trim26Q99PN3 545 aa12.42□□□□□ -0.42
Trerf1-205ENSMUST00000190080 BlmO88700 1416 aa12.36□□□□□ -0.43
Trerf1-205ENSMUST00000190080 Arhgap27A2AB59 869 aa12.35□□□□□ -0.43
Trerf1-205ENSMUST00000190080 NgefQ8CHT1 710 aa12.33□□□□□ -0.44
Trerf1-205ENSMUST00000190080 Fgd1P52734 960 aa12.31□□□□□ -0.44
Trerf1-205ENSMUST00000190080 Anp32aO35381 247 aa12.31□□□□□ -0.44
Trerf1-205ENSMUST00000190080 Rgl3Q3UYI5 709 aa12.29□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 84.3 ms