RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 NexnQ7TPW1 607 aa15.22■□□□□ 0.03
Col6a3-208ENSMUST00000188587 Usp47Q8BY87 1376 aa15.22■□□□□ 0.03
Col6a3-208ENSMUST00000188587 Atf3Q60765 181 aa15.22■□□□□ 0.03
Col6a3-208ENSMUST00000188587 Sirt1Q923E4 737 aa15.21■□□□□ 0.03
Col6a3-208ENSMUST00000188587 Sart1Q9Z315 806 aaKnown RBP15.21■□□□□ 0.03
Col6a3-208ENSMUST00000188587 Shroom4Q1W617 1475 aa15.21■□□□□ 0.03
Col6a3-208ENSMUST00000188587 Ncoa2Q61026 1462 aa15.21■□□□□ 0.03
Col6a3-208ENSMUST00000188587 Gcom1E9PZ54 550 aa15.21■□□□□ 0.03
Col6a3-208ENSMUST00000188587 MyzapQ3UIJ9 466 aa15.21■□□□□ 0.03
Col6a3-208ENSMUST00000188587 G3bp1P97855 465 aaKnown RBP15.2■□□□□ 0.02
Col6a3-208ENSMUST00000188587 Hdgfl1Q2VPR5 283 aa15.2■□□□□ 0.02
Col6a3-208ENSMUST00000188587 Zpr1Q62384 459 aa15.2■□□□□ 0.02
Col6a3-208ENSMUST00000188587 BcanQ61361 883 aa15.2■□□□□ 0.02
Col6a3-208ENSMUST00000188587 Taf3Q5HZG4 932 aa15.2■□□□□ 0.02
Col6a3-208ENSMUST00000188587 Usp40Q8BWR4 1235 aa15.19■□□□□ 0.02
Col6a3-208ENSMUST00000188587 Mink1Q9JM52 1308 aa15.19■□□□□ 0.02
Col6a3-208ENSMUST00000188587 Rufy1Q8BIJ7 712 aa15.19■□□□□ 0.02
Col6a3-208ENSMUST00000188587 Bicd2Q921C5 820 aa15.18■□□□□ 0.02
Col6a3-208ENSMUST00000188587 Sycp1Q62209 993 aa15.18■□□□□ 0.02
Col6a3-208ENSMUST00000188587 Gpatch3Q8BIY1 525 aa15.18■□□□□ 0.02
Col6a3-208ENSMUST00000188587 Q8C5K5 320 aa15.18■□□□□ 0.02
Col6a3-208ENSMUST00000188587 Rock1P70335 1354 aa15.18■□□□□ 0.02
Col6a3-208ENSMUST00000188587 Pip4k2bQ80XI4 416 aa15.18■□□□□ 0.02
Col6a3-208ENSMUST00000188587 Smarca4Q3TKT4 1613 aaKnown RBP15.17■□□□□ 0.02
Col6a3-208ENSMUST00000188587 Hap1O35668 628 aa15.17■□□□□ 0.02
Col6a3-208ENSMUST00000188587 HmmrQ00547 794 aaKnown RBP15.17■□□□□ 0.02
Col6a3-208ENSMUST00000188587 Sf3b2Q3UJB0 878 aaKnown RBP15.17■□□□□ 0.02
Col6a3-208ENSMUST00000188587 Lrrcc1Q69ZB0 1026 aa15.17■□□□□ 0.02
Col6a3-208ENSMUST00000188587 Polr3gQ6NXY9 223 aa15.17■□□□□ 0.02
Col6a3-208ENSMUST00000188587 Synj1Q8CHC4 1574 aa15.17■□□□□ 0.02
Col6a3-208ENSMUST00000188587 Ccdc88bQ4QRL3 1481 aa15.16■□□□□ 0.02
Col6a3-208ENSMUST00000188587 Kif7B7ZNG0 1348 aa15.16■□□□□ 0.02
Col6a3-208ENSMUST00000188587 Nap1l1P28656 391 aaKnown RBP15.16■□□□□ 0.02
Col6a3-208ENSMUST00000188587 Erc2Q6PH08 957 aa15.16■□□□□ 0.02
Col6a3-208ENSMUST00000188587 Gnl3lQ6PGG6 577 aaKnown RBP15.15■□□□□ 0.02
Col6a3-208ENSMUST00000188587 Ccnb3Q810T2 1396 aa15.14■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Wdr78E9PYY5 807 aa15.14■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Znhit6Q3UFB2 460 aaKnown RBP15.14■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Trim29Q8R2Q0 587 aa15.14■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Gsto1O09131 240 aa15.14■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Pabpn1Q8CCS6 302 aaKnown RBP15.14■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Kif3aP28741 701 aa15.14■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Necab1Q8BG18 352 aa15.14■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Ttll5Q8CHB8 1328 aa15.13■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Bcl11aQ9QYE3 773 aa15.13■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Me1P06801 572 aa15.13■□□□□ 0.01
Col6a3-208ENSMUST00000188587 FosbP13346 338 aa15.13■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Smg6P61406 1418 aaKnown RBP15.13■□□□□ 0.01
Col6a3-208ENSMUST00000188587 ErbinQ80TH2 1402 aa15.12■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Soga1E1U8D0 1418 aa15.12■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Rbm5Q91YE7 815 aaKnown RBP15.12■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Phactr2B1AVP0 632 aa15.12■□□□□ 0.01
Col6a3-208ENSMUST00000188587 ChgaP26339 463 aaKnown RBP15.12■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Kif4P33174 1231 aa15.12■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Gripap1Q8VD04 806 aa15.12■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Smc3Q9CW03 1217 aaKnown RBP15.12■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Sytl4Q9R0Q1 673 aa15.12■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Hnrnpul1Q8VDM6 859 aaKnown RBP15.11■□□□□ 0.01
Col6a3-208ENSMUST00000188587 ScribQ80U72 1612 aa15.11■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Inpp5dQ9ES52 1191 aa15.11■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Rfx1P48377 963 aa15.1■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Usp16Q99LG0 825 aa15.1■□□□□ 0.01
Col6a3-208ENSMUST00000188587 A0A0U1RNP2 1173 aa15.1■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Hmgn5Q9JL35 406 aa15.1■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Smg7Q5RJH6 1138 aaKnown RBP15.1■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Taok2Q6ZQ29 1240 aa15.09■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Gprasp1Q5U4C1 1347 aa15.09■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Triml2E9PW10 424 aa15.09■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Chaf1aQ9QWF0 911 aa15.09■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Arhgap5P97393 1501 aa15.09■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Abl1P00520 1123 aa15.09■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Ric3Q8BPM6 367 aa15.09■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Commd10Q8JZY2 202 aa15.08■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Sv2bQ8BG39 683 aa15.08■□□□□ 0.01
Col6a3-208ENSMUST00000188587 Ralbp1Q62172 648 aa15.08■□□□□ 0
Col6a3-208ENSMUST00000188587 Gtf2f1Q3THK3 508 aaKnown RBP15.08■□□□□ 0
Col6a3-208ENSMUST00000188587 Dusp9Q7TNL7 452 aa15.08■□□□□ 0
Col6a3-208ENSMUST00000188587 Dixdc1Q80Y83 711 aa15.08■□□□□ 0
Col6a3-208ENSMUST00000188587 Hmox1P14901 289 aa15.07■□□□□ 0
Col6a3-208ENSMUST00000188587 Smc2Q8CG48 1191 aaKnown RBP15.07■□□□□ 0
Col6a3-208ENSMUST00000188587 AcrbpQ3V140 540 aa15.07■□□□□ 0
Col6a3-208ENSMUST00000188587 Mad1l1Q9WTX8 717 aaKnown RBP15.07■□□□□ 0
Col6a3-208ENSMUST00000188587 Cfap65Q3V0B4 1847 aa15.07■□□□□ 0
Col6a3-208ENSMUST00000188587 Cfdp1O88271 295 aaKnown RBP15.07■□□□□ 0
Col6a3-208ENSMUST00000188587 Cc2d2bA0A286YDU8 1405 aa15.07■□□□□ 0
Col6a3-208ENSMUST00000188587 Phldb1Q6PDH0 1371 aaKnown RBP15.06■□□□□ 0
Col6a3-208ENSMUST00000188587 Samd1D3YXK1 519 aa15.06■□□□□ 0
Col6a3-208ENSMUST00000188587 Fnbp4Q6ZQ03 1031 aa15.06■□□□□ 0
Col6a3-208ENSMUST00000188587 Rapgef2Q8CHG7 1496 aa15.06■□□□□ 0
Col6a3-208ENSMUST00000188587 Carmil1Q6EDY6 1374 aa15.06■□□□□ 0
Col6a3-208ENSMUST00000188587 Cetn4Q8K4K1 168 aa15.06■□□□□ 0
Col6a3-208ENSMUST00000188587 Cep89Q9CZX2 791 aa15.06■□□□□ 0
Col6a3-208ENSMUST00000188587 Dapk1Q80YE7 1442 aa15.06■□□□□ 0
Col6a3-208ENSMUST00000188587 Chmp4cQ9D7F7 232 aa15.06■□□□□ 0
Col6a3-208ENSMUST00000188587 Psma5Q9Z2U1 241 aaKnown RBP15.06■□□□□ 0
Col6a3-208ENSMUST00000188587 Fam184bQ0KK56 942 aa15.06■□□□□ 0
Col6a3-208ENSMUST00000188587 Cchcr1Q8K2I2 770 aa15.06■□□□□ 0
Col6a3-208ENSMUST00000188587 Znf704Q9ERQ3 566 aa15.06■□□□□ 0
Col6a3-208ENSMUST00000188587 IkQ9Z1M8 557 aaKnown RBP15.06■□□□□ 0
Col6a3-208ENSMUST00000188587 Klf15Q9EPW2 415 aa15.05■□□□□ -0
Retrieved 100 of 22,080 RNA–protein pairs in 36.7 ms