RNA–Protein interactions for RNA: ENSMUST00000187424.1

Msh3-205, Transcript of DNA mismatch repair protein Msh3, mousemouse

TSL 2 BASIC

Gene Msh3, Length 666 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-205ENSMUST00000187424 Nsd2Q8BVE8 1365 aa23.65■■□□□ 1.38
Msh3-205ENSMUST00000187424 Trak1Q6PD31 939 aa23.64■■□□□ 1.37
Msh3-205ENSMUST00000187424 Naip7Q9JIB3 1402 aa23.64■■□□□ 1.37
Msh3-205ENSMUST00000187424 Slit2Q9R1B9 1521 aa23.64■■□□□ 1.37
Msh3-205ENSMUST00000187424 Kif7B7ZNG0 1348 aa23.63■■□□□ 1.37
Msh3-205ENSMUST00000187424 Mphosph9A6H5Y1 991 aa23.63■■□□□ 1.37
Msh3-205ENSMUST00000187424 Pik3c2aQ61194 1686 aa23.63■■□□□ 1.37
Msh3-205ENSMUST00000187424 Arap3Q8R5G7 1538 aa23.59■■□□□ 1.37
Msh3-205ENSMUST00000187424 Cypt2Q6P924 180 aa23.59■■□□□ 1.37
Msh3-205ENSMUST00000187424 Atp7aQ64430 1491 aa23.59■■□□□ 1.37
Msh3-205ENSMUST00000187424 IghaA0A0A6YXW6 389 aa23.58■■□□□ 1.37
Msh3-205ENSMUST00000187424 Iqgap3F8VQ29 1632 aa23.58■■□□□ 1.36
Msh3-205ENSMUST00000187424 PplQ9R269 1755 aa23.56■■□□□ 1.36
Msh3-205ENSMUST00000187424 Tecpr2Q3UH45 1423 aa23.56■■□□□ 1.36
Msh3-205ENSMUST00000187424 Tarbp1E9Q368 1579 aa23.56■■□□□ 1.36
Msh3-205ENSMUST00000187424 Ehbp1l1Q99MS7 1716 aa23.56■■□□□ 1.36
Msh3-205ENSMUST00000187424 Ccer2J3QPU5 274 aa23.54■■□□□ 1.36
Msh3-205ENSMUST00000187424 Dhx9O70133 1380 aaKnown RBP23.52■■□□□ 1.36
Msh3-205ENSMUST00000187424 Uggt1Q6P5E4 1551 aa23.52■■□□□ 1.36
Msh3-205ENSMUST00000187424 Tom1O88746 492 aa23.52■■□□□ 1.36
Msh3-205ENSMUST00000187424 Brinp3Q499E0 766 aa23.52■■□□□ 1.36
Msh3-205ENSMUST00000187424 Efcab6Q6P1E8 1516 aa23.51■■□□□ 1.35
Msh3-205ENSMUST00000187424 Edc4Q3UJB9 1406 aaKnown RBP23.5■■□□□ 1.35
Msh3-205ENSMUST00000187424 Txndc2Q6P902 515 aa23.49■■□□□ 1.35
Msh3-205ENSMUST00000187424 PalldQ9ET54 1408 aa23.49■■□□□ 1.35
Msh3-205ENSMUST00000187424 Nyap1Q6PFX7 833 aa23.47■■□□□ 1.35
Msh3-205ENSMUST00000187424 Pkd2O35245 966 aa23.46■■□□□ 1.35
Msh3-205ENSMUST00000187424 Fbln2P37889 1221 aa23.46■■□□□ 1.35
Msh3-205ENSMUST00000187424 Abca8aQ8K442 1620 aa23.45■■□□□ 1.34
Msh3-205ENSMUST00000187424 Erich6D3Z6S9 713 aa23.45■■□□□ 1.34
Msh3-205ENSMUST00000187424 Pik3c2gO70167 1506 aa23.44■■□□□ 1.34
Msh3-205ENSMUST00000187424 Ankrd36D3Z4K0 1415 aa23.44■■□□□ 1.34
Msh3-205ENSMUST00000187424 Slit3Q9WVB4 1523 aa23.42■■□□□ 1.34
Msh3-205ENSMUST00000187424 Nhsl1Q8CAF4 1587 aa23.41■■□□□ 1.34
Msh3-205ENSMUST00000187424 Dot1lQ6XZL8 1540 aa23.41■■□□□ 1.34
Msh3-205ENSMUST00000187424 Adgrl1Q80TR1 1466 aa23.41■■□□□ 1.34
Msh3-205ENSMUST00000187424 Sall3Q62255 1320 aa23.4■■□□□ 1.34
Msh3-205ENSMUST00000187424 Stk24Q99KH8 431 aa23.39■■□□□ 1.33
Msh3-205ENSMUST00000187424 Tns3Q5SSZ5 1440 aa23.38■■□□□ 1.33
Msh3-205ENSMUST00000187424 ErbinQ80TH2 1402 aa23.38■■□□□ 1.33
Msh3-205ENSMUST00000187424 Mroh1E0CZ22 1640 aa23.37■■□□□ 1.33
Msh3-205ENSMUST00000187424 Fnbp4Q6ZQ03 1031 aa23.36■■□□□ 1.33
Msh3-205ENSMUST00000187424 Gimap5Q8BWF2 308 aa23.36■■□□□ 1.33
Msh3-205ENSMUST00000187424 Arhgef28P97433 1693 aa23.35■■□□□ 1.33
Msh3-205ENSMUST00000187424 Eid3Q3V124 375 aa23.35■■□□□ 1.33
Msh3-205ENSMUST00000187424 AatkQ80YE4 1365 aa23.34■■□□□ 1.33
Msh3-205ENSMUST00000187424 Prrc2bQ7TPM1 1486 aaKnown RBP23.34■■□□□ 1.33
Msh3-205ENSMUST00000187424 Unc13bQ9Z1N9 1602 aa23.33■■□□□ 1.33
Msh3-205ENSMUST00000187424 Ppip5k1A2ARP1 1436 aa23.32■■□□□ 1.32
Msh3-205ENSMUST00000187424 Siglec1Q62230 1695 aa23.31■■□□□ 1.32
Msh3-205ENSMUST00000187424 PtprvP70289 1705 aa23.3■■□□□ 1.32
Msh3-205ENSMUST00000187424 Cntnap1O54991 1385 aa23.29■■□□□ 1.32
Msh3-205ENSMUST00000187424 NinlQ6ZQ12 1394 aa23.29■■□□□ 1.32
Msh3-205ENSMUST00000187424 Psme1P97371 249 aa23.29■■□□□ 1.32
Msh3-205ENSMUST00000187424 Slain2Q8CI08 581 aa23.28■■□□□ 1.32
Msh3-205ENSMUST00000187424 Asxl2Q8BZ32 1370 aa23.27■■□□□ 1.32
Msh3-205ENSMUST00000187424 Ttll13A4Q9F6 804 aa23.27■■□□□ 1.32
Msh3-205ENSMUST00000187424 Nwd1A6H603 1563 aa23.26■■□□□ 1.31
Msh3-205ENSMUST00000187424 Zfp142G5E869 1843 aa23.25■■□□□ 1.31
Msh3-205ENSMUST00000187424 Sema6bO54951 886 aa23.25■■□□□ 1.31
Msh3-205ENSMUST00000187424 Rprd2Q6NXI6 1469 aaKnown RBP23.24■■□□□ 1.31
Msh3-205ENSMUST00000187424 P3h3Q8CG70 732 aa23.24■■□□□ 1.31
Msh3-205ENSMUST00000187424 Washc2Q6PGL7 1334 aa23.24■■□□□ 1.31
Msh3-205ENSMUST00000187424 Rock1P70335 1354 aa23.23■■□□□ 1.31
Msh3-205ENSMUST00000187424 Usp47Q8BY87 1376 aa23.23■■□□□ 1.31
Msh3-205ENSMUST00000187424 Myom1Q62234 1667 aaKnown RBP23.22■■□□□ 1.31
Msh3-205ENSMUST00000187424 Gm13695A2AK44 830 aa23.22■■□□□ 1.31
Msh3-205ENSMUST00000187424 Evi5lH3BKQ3 813 aa23.22■■□□□ 1.31
Msh3-205ENSMUST00000187424 Slc5a4bQ91ZP4 660 aa23.21■■□□□ 1.31
Msh3-205ENSMUST00000187424 Hdac5Q9Z2V6 1113 aa23.21■■□□□ 1.31
Msh3-205ENSMUST00000187424 Lrp6O88572 1613 aa23.21■■□□□ 1.31
Msh3-205ENSMUST00000187424 AU022751B1B0V2 589 aa23.2■■□□□ 1.3
Msh3-205ENSMUST00000187424 Hspa5P20029 655 aaKnown RBP23.19■■□□□ 1.3
Msh3-205ENSMUST00000187424 Col14a1Q80X19 1797 aa23.19■■□□□ 1.3
Msh3-205ENSMUST00000187424 Qtrt2B8ZXI1 415 aa23.18■■□□□ 1.3
Msh3-205ENSMUST00000187424 Plxnc1Q9QZC2 1574 aa23.17■■□□□ 1.3
Msh3-205ENSMUST00000187424 Adamts13Q769J6 1426 aa23.16■■□□□ 1.3
Msh3-205ENSMUST00000187424 NalcnQ8BXR5 1738 aa23.16■■□□□ 1.3
Msh3-205ENSMUST00000187424 Tulp4Q9JIL5 1547 aa23.15■■□□□ 1.3
Msh3-205ENSMUST00000187424 Mroh3A0A1D5RM54 893 aa23.15■■□□□ 1.3
Msh3-205ENSMUST00000187424 Pik3r4Q8VD65 1358 aa23.14■■□□□ 1.29
Msh3-205ENSMUST00000187424 Dapk1Q80YE7 1442 aa23.13■■□□□ 1.29
Msh3-205ENSMUST00000187424 Rims1Q99NE5 1463 aa23.12■■□□□ 1.29
Msh3-205ENSMUST00000187424 Znf526Q8BI66 675 aa23.12■■□□□ 1.29
Msh3-205ENSMUST00000187424 Rgl3Q3UYI5 709 aa23.11■■□□□ 1.29
Msh3-205ENSMUST00000187424 C3P01027 1663 aa23.09■■□□□ 1.29
Msh3-205ENSMUST00000187424 Ift172Q6VH22 1749 aa23.09■■□□□ 1.29
Msh3-205ENSMUST00000187424 MypopQ8R4U1 393 aa23.09■■□□□ 1.29
Msh3-205ENSMUST00000187424 KdrP35918 1367 aa23.09■■□□□ 1.29
Msh3-205ENSMUST00000187424 MaddQ80U28 1577 aa23.06■■□□□ 1.28
Msh3-205ENSMUST00000187424 Bcl2l12Q9D3J3 255 aa23.06■■□□□ 1.28
Msh3-205ENSMUST00000187424 Marf1Q8BJ34 1730 aaKnown RBP23.05■■□□□ 1.28
Msh3-205ENSMUST00000187424 Tmem94Q7TSH8 1360 aa23.05■■□□□ 1.28
Msh3-205ENSMUST00000187424 Itsn2Q9Z0R6 1659 aa23.04■■□□□ 1.28
Msh3-205ENSMUST00000187424 Col22a1E9Q7P1 1613 aa23.04■■□□□ 1.28
Msh3-205ENSMUST00000187424 Ybx3Q9JKB3 361 aaKnown RBP23.03■■□□□ 1.28
Msh3-205ENSMUST00000187424 Zranb1Q7M760 708 aa23.02■■□□□ 1.28
Msh3-205ENSMUST00000187424 Cps1Q8C196 1500 aa23.01■■□□□ 1.27
Msh3-205ENSMUST00000187424 Abcc10Q8R4P9 1501 aa23.01■■□□□ 1.27
Msh3-205ENSMUST00000187424 Wnk3Q80XP9 1757 aa23■■□□□ 1.27
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms