RNA–Protein interactions for RNA: ENSMUST00000159592.7

Ssh1-204, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ssh1, Length 8,436 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-204ENSMUST00000159592 Zfp444Q3TDV8 331 aaKnown RBP16.5■□□□□ 0.23
Ssh1-204ENSMUST00000159592 Atl3Q91YH5 541 aa16.5■□□□□ 0.23
Ssh1-204ENSMUST00000159592 Stk31Q99MW1 1018 aa16.5■□□□□ 0.23
Ssh1-204ENSMUST00000159592 Polr1aO35134 1717 aaKnown RBP16.5■□□□□ 0.23
Ssh1-204ENSMUST00000159592 Nectin2P32507 530 aa16.48■□□□□ 0.23
Ssh1-204ENSMUST00000159592 Drc7Q6V3W6 876 aa16.48■□□□□ 0.23
Ssh1-204ENSMUST00000159592 Rnf214Q8BFU3 668 aaKnown RBP16.48■□□□□ 0.23
Ssh1-204ENSMUST00000159592 KinQ8K339 391 aa16.48■□□□□ 0.23
Ssh1-204ENSMUST00000159592 Ipo4Q8VI75 1082 aa16.48■□□□□ 0.23
Ssh1-204ENSMUST00000159592 Zfp644E9QA22 1323 aa16.47■□□□□ 0.23
Ssh1-204ENSMUST00000159592 Tpm3P21107 285 aaKnown RBP16.47■□□□□ 0.23
Ssh1-204ENSMUST00000159592 Utp14aQ640M1 767 aaKnown RBP16.47■□□□□ 0.23
Ssh1-204ENSMUST00000159592 Dixdc1Q80Y83 711 aa16.47■□□□□ 0.23
Ssh1-204ENSMUST00000159592 PogkQ80TC5 607 aa16.47■□□□□ 0.23
Ssh1-204ENSMUST00000159592 Ppp2r3aB2RXC8 1150 aa16.47■□□□□ 0.23
Ssh1-204ENSMUST00000159592 Rrp9Q91WM3 475 aaKnown RBP16.47■□□□□ 0.23
Ssh1-204ENSMUST00000159592 Ppp1r18Q8BQ30 594 aa16.46■□□□□ 0.23
Ssh1-204ENSMUST00000159592 Rbm10Q99KG3 930 aaKnown RBP16.46■□□□□ 0.23
Ssh1-204ENSMUST00000159592 Nol12Q8BG17 217 aa16.45■□□□□ 0.22
Ssh1-204ENSMUST00000159592 WrnO09053 1401 aa16.45■□□□□ 0.22
Ssh1-204ENSMUST00000159592 Nek4Q9Z1J2 792 aa16.45■□□□□ 0.22
Ssh1-204ENSMUST00000159592 Cc2d2bA0A286YDU8 1405 aa16.45■□□□□ 0.22
Ssh1-204ENSMUST00000159592 AampJ3QN89 436 aa16.45■□□□□ 0.22
Ssh1-204ENSMUST00000159592 Stk11ipQ3TAA7 1072 aa16.44■□□□□ 0.22
Ssh1-204ENSMUST00000159592 Fam13bQ8K2H3 851 aa16.44■□□□□ 0.22
Ssh1-204ENSMUST00000159592 Bicd2Q921C5 820 aa16.44■□□□□ 0.22
Ssh1-204ENSMUST00000159592 Q9D2X8 372 aa16.44■□□□□ 0.22
Ssh1-204ENSMUST00000159592 Tceal9Q9DD24 104 aa16.44■□□□□ 0.22
Ssh1-204ENSMUST00000159592 BccipQ9CWI3 316 aa16.44■□□□□ 0.22
Ssh1-204ENSMUST00000159592 Pnmal2G3X9N3 661 aa16.43■□□□□ 0.22
Ssh1-204ENSMUST00000159592 Tpm2P58774 284 aa16.42■□□□□ 0.22
Ssh1-204ENSMUST00000159592 Ric3Q8BPM6 367 aa16.42■□□□□ 0.22
Ssh1-204ENSMUST00000159592 Smc3Q9CW03 1217 aaKnown RBP16.42■□□□□ 0.22
Ssh1-204ENSMUST00000159592 Mad1l1Q9WTX8 717 aaKnown RBP16.42■□□□□ 0.22
Ssh1-204ENSMUST00000159592 Mink1Q9JM52 1308 aa16.41■□□□□ 0.22
Ssh1-204ENSMUST00000159592 Usp16Q99LG0 825 aa16.41■□□□□ 0.22
Ssh1-204ENSMUST00000159592 Gabpb2P81069 414 aa16.41■□□□□ 0.22
Ssh1-204ENSMUST00000159592 Arap1Q4LDD4 1452 aa16.41■□□□□ 0.22
Ssh1-204ENSMUST00000159592 Naip1Q9QWK5 1403 aa16.4■□□□□ 0.22
Ssh1-204ENSMUST00000159592 AppP12023 770 aa16.4■□□□□ 0.22
Ssh1-204ENSMUST00000159592 Hmox1P14901 289 aa16.4■□□□□ 0.22
Ssh1-204ENSMUST00000159592 Tdrd9Q14BI7 1383 aa16.4■□□□□ 0.22
Ssh1-204ENSMUST00000159592 SkilQ60665 675 aa16.4■□□□□ 0.22
Ssh1-204ENSMUST00000159592 Rbm25B2RY56 838 aaKnown RBP16.4■□□□□ 0.22
Ssh1-204ENSMUST00000159592 Ift140E9PY46 1464 aa16.39■□□□□ 0.21
Ssh1-204ENSMUST00000159592 Arid4aF8VPQ2 1261 aaKnown RBP16.39■□□□□ 0.21
Ssh1-204ENSMUST00000159592 Phf14Q9D4H9 881 aa16.39■□□□□ 0.21
Ssh1-204ENSMUST00000159592 FosbP13346 338 aa16.39■□□□□ 0.21
Ssh1-204ENSMUST00000159592 Shroom4Q1W617 1475 aa16.38■□□□□ 0.21
Ssh1-204ENSMUST00000159592 Iqgap2Q3UQ44 1575 aa16.38■□□□□ 0.21
Ssh1-204ENSMUST00000159592 Arhgef5E9Q7D5 1581 aa16.38■□□□□ 0.21
Ssh1-204ENSMUST00000159592 LrpprcQ6PB66 1392 aaKnown RBP16.38■□□□□ 0.21
Ssh1-204ENSMUST00000159592 Usp48Q3V0C5 1052 aa16.38■□□□□ 0.21
Ssh1-204ENSMUST00000159592 Ccdc47Q9D024 483 aaKnown RBP16.38■□□□□ 0.21
Ssh1-204ENSMUST00000159592 Ccdc173A0JLY1 547 aa16.38■□□□□ 0.21
Ssh1-204ENSMUST00000159592 Cabp4Q8VHC5 271 aa16.38■□□□□ 0.21
Ssh1-204ENSMUST00000159592 Ddx11Q6AXC6 880 aa16.37■□□□□ 0.21
Ssh1-204ENSMUST00000159592 Cetn4Q8K4K1 168 aa16.37■□□□□ 0.21
Ssh1-204ENSMUST00000159592 EzrP26040 586 aaKnown RBP16.36■□□□□ 0.21
Ssh1-204ENSMUST00000159592 Ppp2r1aQ76MZ3 589 aa16.36■□□□□ 0.21
Ssh1-204ENSMUST00000159592 Gtf2a1Q99PM3 378 aa16.36■□□□□ 0.21
Ssh1-204ENSMUST00000159592 Paxip1Q6NZQ4 1056 aa16.36■□□□□ 0.21
Ssh1-204ENSMUST00000159592 Hmgn5Q9JL35 406 aa16.36■□□□□ 0.21
Ssh1-204ENSMUST00000159592 Tpm1P58771 284 aa16.35■□□□□ 0.21
Ssh1-204ENSMUST00000159592 Shq1Q7TMX5 569 aa16.35■□□□□ 0.21
Ssh1-204ENSMUST00000159592 Tiam1Q60610 1591 aa16.35■□□□□ 0.21
Ssh1-204ENSMUST00000159592 Dnai2A2AC93 623 aa16.35■□□□□ 0.21
Ssh1-204ENSMUST00000159592 Q8BT18 775 aa16.34■□□□□ 0.21
Ssh1-204ENSMUST00000159592 Rab3gap2Q8BMG7 1366 aa16.34■□□□□ 0.21
Ssh1-204ENSMUST00000159592 Hnrnpul1Q8VDM6 859 aaKnown RBP16.34■□□□□ 0.21
Ssh1-204ENSMUST00000159592 Ftsj3Q9DBE9 838 aaKnown RBP16.33■□□□□ 0.21
Ssh1-204ENSMUST00000159592 Anp32eP97822 260 aaKnown RBP16.33■□□□□ 0.21
Ssh1-204ENSMUST00000159592 Dhx29Q6PGC1 1365 aaKnown RBP16.33■□□□□ 0.2
Ssh1-204ENSMUST00000159592 Ccdc34Q3UI66 367 aa16.33■□□□□ 0.2
Ssh1-204ENSMUST00000159592 Fam193aQ8CGI1 1231 aaKnown RBP16.33■□□□□ 0.2
Ssh1-204ENSMUST00000159592 Swt1Q9DBQ9 907 aa16.33■□□□□ 0.2
Ssh1-204ENSMUST00000159592 Ap3b2Q9JME5 1082 aa16.33■□□□□ 0.2
Ssh1-204ENSMUST00000159592 Hook1Q8BIL5 728 aa16.32■□□□□ 0.2
Ssh1-204ENSMUST00000159592 Gprasp1Q5U4C1 1347 aa16.32■□□□□ 0.2
Ssh1-204ENSMUST00000159592 Srek1Q8BZX4 494 aaKnown RBP16.32■□□□□ 0.2
Ssh1-204ENSMUST00000159592 Cyp46a1Q9WVK8 500 aa16.32■□□□□ 0.2
Ssh1-204ENSMUST00000159592 Gm21969J3QJZ1 289 aa16.32■□□□□ 0.2
Ssh1-204ENSMUST00000159592 Kif3aP28741 701 aa16.32■□□□□ 0.2
Ssh1-204ENSMUST00000159592 Znf692Q3U381 531 aa16.32■□□□□ 0.2
Ssh1-204ENSMUST00000159592 Rnf20Q5DTM8 973 aa16.32■□□□□ 0.2
Ssh1-204ENSMUST00000159592 ErbinQ80TH2 1402 aa16.32■□□□□ 0.2
Ssh1-204ENSMUST00000159592 A0A0U1RNP2 1173 aa16.32■□□□□ 0.2
Ssh1-204ENSMUST00000159592 Apaf1O88879 1249 aa16.31■□□□□ 0.2
Ssh1-204ENSMUST00000159592 Gnai1B2RSH2 354 aa16.31■□□□□ 0.2
Ssh1-204ENSMUST00000159592 Rec8Q8C5S7 591 aa16.31■□□□□ 0.2
Ssh1-204ENSMUST00000159592 Gnai3Q9DC51 354 aa16.31■□□□□ 0.2
Ssh1-204ENSMUST00000159592 Ciz1Q8VEH2 845 aa16.31■□□□□ 0.2
Ssh1-204ENSMUST00000159592 Sptbn5F6UCX4 1208 aa16.31■□□□□ 0.2
Ssh1-204ENSMUST00000159592 Ssh1Q76I79 1042 aa16.3■□□□□ 0.2
Ssh1-204ENSMUST00000159592 Ncoa2Q61026 1462 aa16.3■□□□□ 0.2
Ssh1-204ENSMUST00000159592 Gpatch3Q8BIY1 525 aa16.3■□□□□ 0.2
Ssh1-204ENSMUST00000159592 Cplx1P63040 134 aa16.29■□□□□ 0.2
Ssh1-204ENSMUST00000159592 Babam1Q3UI43 333 aa16.29■□□□□ 0.2
Ssh1-204ENSMUST00000159592 Stk3Q9JI10 497 aa16.29■□□□□ 0.2
Ssh1-204ENSMUST00000159592 Phldb1Q6PDH0 1371 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 47.5 ms