RNA–Protein interactions for RNA: ENSMUST00000115345.7

Syn1-202, Transcript of Synapsin-1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Syn1, Length 3,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1-202ENSMUST00000115345 Rnf17Q99MV7 1640 aa18.54■□□□□ 0.56
Syn1-202ENSMUST00000115345 Abca8bQ8K440 1620 aa18.53■□□□□ 0.56
Syn1-202ENSMUST00000115345 Dnajc5gQ8C632 165 aa18.53■□□□□ 0.56
Syn1-202ENSMUST00000115345 Bms1Q6PGF5 1284 aaKnown RBP18.52■□□□□ 0.56
Syn1-202ENSMUST00000115345 OptnQ8K3K8 584 aa18.52■□□□□ 0.56
Syn1-202ENSMUST00000115345 Mknk2Q8CDB0 459 aa18.52■□□□□ 0.55
Syn1-202ENSMUST00000115345 Ccdc96Q9CR92 584 aa18.51■□□□□ 0.55
Syn1-202ENSMUST00000115345 Kcnj4P52189 445 aa18.5■□□□□ 0.55
Syn1-202ENSMUST00000115345 Mmp14P53690 582 aa18.5■□□□□ 0.55
Syn1-202ENSMUST00000115345 Cep162Q6ZQ06 1403 aa18.5■□□□□ 0.55
Syn1-202ENSMUST00000115345 Zfp251Q6PCX8 632 aa18.49■□□□□ 0.55
Syn1-202ENSMUST00000115345 BlmO88700 1416 aa18.49■□□□□ 0.55
Syn1-202ENSMUST00000115345 IqubQ8CDK3 788 aa18.48■□□□□ 0.55
Syn1-202ENSMUST00000115345 Fancd2Q80V62 1450 aa18.48■□□□□ 0.55
Syn1-202ENSMUST00000115345 Rapgef6Q5NCJ1 1609 aa18.48■□□□□ 0.55
Syn1-202ENSMUST00000115345 Ttll13A4Q9F6 804 aa18.47■□□□□ 0.55
Syn1-202ENSMUST00000115345 Cbx1P83917 185 aaKnown RBP18.47■□□□□ 0.55
Syn1-202ENSMUST00000115345 Ncoa2Q61026 1462 aa18.47■□□□□ 0.55
Syn1-202ENSMUST00000115345 Ankrd26Q811D2 1581 aa18.46■□□□□ 0.55
Syn1-202ENSMUST00000115345 Kdm6bQ5NCY0 1641 aa18.45■□□□□ 0.54
Syn1-202ENSMUST00000115345 Dmrt2Q8BG36 561 aa18.45■□□□□ 0.54
Syn1-202ENSMUST00000115345 A2mQ6GQT1 1474 aa18.44■□□□□ 0.54
Syn1-202ENSMUST00000115345 NudcO35685 332 aaKnown RBP18.44■□□□□ 0.54
Syn1-202ENSMUST00000115345 Arap1Q4LDD4 1452 aa18.42■□□□□ 0.54
Syn1-202ENSMUST00000115345 Psen1P49769 467 aa18.41■□□□□ 0.54
Syn1-202ENSMUST00000115345 Gm13697A2AK42 830 aa18.41■□□□□ 0.54
Syn1-202ENSMUST00000115345 Mrs2Q5NCE8 434 aa18.41■□□□□ 0.54
Syn1-202ENSMUST00000115345 Gripap1Q8VD04 806 aa18.41■□□□□ 0.54
Syn1-202ENSMUST00000115345 Ush1cQ9ES64 910 aa18.4■□□□□ 0.54
Syn1-202ENSMUST00000115345 Brwd3A2AHJ4 1799 aa18.4■□□□□ 0.54
Syn1-202ENSMUST00000115345 Pdcl2Q78Y63 240 aa18.4■□□□□ 0.54
Syn1-202ENSMUST00000115345 SetQ9EQU5 289 aaKnown RBP18.4■□□□□ 0.54
Syn1-202ENSMUST00000115345 Mink1Q9JM52 1308 aa18.39■□□□□ 0.53
Syn1-202ENSMUST00000115345 SlkO54988 1233 aa18.38■□□□□ 0.53
Syn1-202ENSMUST00000115345 Mcm4P49717 862 aa18.38■□□□□ 0.53
Syn1-202ENSMUST00000115345 Ncapd3Q6ZQK0 1506 aa18.37■□□□□ 0.53
Syn1-202ENSMUST00000115345 Magi1Q6RHR9 1471 aa18.36■□□□□ 0.53
Syn1-202ENSMUST00000115345 Mia2Q91ZV0 1396 aa18.36■□□□□ 0.53
Syn1-202ENSMUST00000115345 Ica1lQ3TY65 431 aa18.36■□□□□ 0.53
Syn1-202ENSMUST00000115345 Hecw2Q6I6G8 1578 aa18.36■□□□□ 0.53
Syn1-202ENSMUST00000115345 Naip2Q9QUK4 1447 aa18.36■□□□□ 0.53
Syn1-202ENSMUST00000115345 MlecQ6ZQI3 291 aaKnown RBP18.36■□□□□ 0.53
Syn1-202ENSMUST00000115345 Mkrn3Q60764 544 aa18.35■□□□□ 0.53
Syn1-202ENSMUST00000115345 Eif2s2Q99L45 331 aaKnown RBP18.34■□□□□ 0.53
Syn1-202ENSMUST00000115345 Map7d2A2AG50 781 aa18.34■□□□□ 0.53
Syn1-202ENSMUST00000115345 Kiaa0556Q8C753 1610 aa18.34■□□□□ 0.53
Syn1-202ENSMUST00000115345 Slc4a2P13808 1237 aaKnown RBP18.33■□□□□ 0.53
Syn1-202ENSMUST00000115345 L3mbtl2P59178 703 aa18.33■□□□□ 0.53
Syn1-202ENSMUST00000115345 Abca9Q8K449 1623 aa18.33■□□□□ 0.52
Syn1-202ENSMUST00000115345 Zmynd15Q8C0R7 736 aa18.33■□□□□ 0.52
Syn1-202ENSMUST00000115345 Kif27Q7M6Z4 1394 aa18.32■□□□□ 0.52
Syn1-202ENSMUST00000115345 Prex2Q3LAC4 1598 aa18.32■□□□□ 0.52
Syn1-202ENSMUST00000115345 Brpf1B2RRD7 1212 aa18.32■□□□□ 0.52
Syn1-202ENSMUST00000115345 Mlh3A0A1Y7VMP7 1443 aa18.32■□□□□ 0.52
Syn1-202ENSMUST00000115345 Irf6P97431 467 aa18.31■□□□□ 0.52
Syn1-202ENSMUST00000115345 Dhx57Q6P5D3 1388 aaKnown RBP18.31■□□□□ 0.52
Syn1-202ENSMUST00000115345 MsnP26041 577 aaKnown RBP18.31■□□□□ 0.52
Syn1-202ENSMUST00000115345 B4galnt3Q6L8S8 986 aa18.31■□□□□ 0.52
Syn1-202ENSMUST00000115345 Fam177a1Q8BR63 207 aa18.31■□□□□ 0.52
Syn1-202ENSMUST00000115345 Prkrip1Q9CWV6 186 aaKnown RBP18.31■□□□□ 0.52
Syn1-202ENSMUST00000115345 Kif14L0N7N1 1674 aaKnown RBP18.3■□□□□ 0.52
Syn1-202ENSMUST00000115345 Ice2Q3UZ18 988 aaKnown RBP18.3■□□□□ 0.52
Syn1-202ENSMUST00000115345 Isy1Q69ZQ2 285 aaKnown RBP18.3■□□□□ 0.52
Syn1-202ENSMUST00000115345 Synj2Q9D2G5 1434 aa18.29■□□□□ 0.52
Syn1-202ENSMUST00000115345 Becn1O88597 448 aa18.29■□□□□ 0.52
Syn1-202ENSMUST00000115345 Erich3F6QRE9 1637 aa18.29■□□□□ 0.52
Syn1-202ENSMUST00000115345 Lmo7E9PYF4 1699 aaKnown RBP18.29■□□□□ 0.52
Syn1-202ENSMUST00000115345 Atp2b3Q0VF55 1220 aa18.29■□□□□ 0.52
Syn1-202ENSMUST00000115345 Rps6ka5Q8C050 863 aa18.28■□□□□ 0.52
Syn1-202ENSMUST00000115345 Qser1A2BIE1 1698 aa18.27■□□□□ 0.51
Syn1-202ENSMUST00000115345 Fam208aQ69ZR9 1610 aaKnown RBP18.26■□□□□ 0.51
Syn1-202ENSMUST00000115345 Ercc6l2Q9JIM3 1537 aa18.26■□□□□ 0.51
Syn1-202ENSMUST00000115345 Ak7Q9D2H2 614 aa18.26■□□□□ 0.51
Syn1-202ENSMUST00000115345 Mctp2Q5RJH2 878 aa18.25■□□□□ 0.51
Syn1-202ENSMUST00000115345 Kank4Q6P9J5 1016 aa18.25■□□□□ 0.51
Syn1-202ENSMUST00000115345 Cyb5rlB1AS42 316 aa18.25■□□□□ 0.51
Syn1-202ENSMUST00000115345 Hsp90b1P08113 802 aaKnown RBP18.25■□□□□ 0.51
Syn1-202ENSMUST00000115345 Antxr1Q9CZ52 562 aa18.25■□□□□ 0.51
Syn1-202ENSMUST00000115345 Ppp1r9bQ6R891 817 aaKnown RBP18.25■□□□□ 0.51
Syn1-202ENSMUST00000115345 Ofd1Q80Z25 1017 aa18.25■□□□□ 0.51
Syn1-202ENSMUST00000115345 Gm6268A2A3U9 297 aa18.24■□□□□ 0.51
Syn1-202ENSMUST00000115345 Mak16Q8BGS0 296 aaKnown RBP18.24■□□□□ 0.51
Syn1-202ENSMUST00000115345 Znf771Q8BJ90 317 aa18.24■□□□□ 0.51
Syn1-202ENSMUST00000115345 Ccnb3Q810T2 1396 aa18.23■□□□□ 0.51
Syn1-202ENSMUST00000115345 Map7O88735 730 aa18.23■□□□□ 0.51
Syn1-202ENSMUST00000115345 Erich6bQ9D4S6 220 aa18.23■□□□□ 0.51
Syn1-202ENSMUST00000115345 Wdr78E9PYY5 807 aa18.22■□□□□ 0.51
Syn1-202ENSMUST00000115345 Gzf1Q4VBD9 706 aa18.22■□□□□ 0.51
Syn1-202ENSMUST00000115345 Ccdc38Q8CDN8 563 aa18.22■□□□□ 0.51
Syn1-202ENSMUST00000115345 Adamtsl3G3UXC7 1706 aa18.21■□□□□ 0.51
Syn1-202ENSMUST00000115345 Ncoa3O09000 1398 aa18.21■□□□□ 0.51
Syn1-202ENSMUST00000115345 Hsp90ab1P11499 724 aaKnown RBP18.21■□□□□ 0.51
Syn1-202ENSMUST00000115345 Capn2O08529 700 aa18.2■□□□□ 0.5
Syn1-202ENSMUST00000115345 PtmaP26350 111 aa18.2■□□□□ 0.5
Syn1-202ENSMUST00000115345 Pwp2Q8BU03 919 aaKnown RBP18.2■□□□□ 0.5
Syn1-202ENSMUST00000115345 Gabpb2P81069 414 aa18.2■□□□□ 0.5
Syn1-202ENSMUST00000115345 Fam163aQ8CAA5 168 aa18.2■□□□□ 0.5
Syn1-202ENSMUST00000115345 AdnpQ9Z103 1108 aaKnown RBP18.2■□□□□ 0.5
Syn1-202ENSMUST00000115345 Pcf11G3X9Z4 1553 aa18.2■□□□□ 0.5
Syn1-202ENSMUST00000115345 Kiaa1551Q5DTW7 1521 aa18.2■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 41.9 ms