RNA–Protein interactions for RNA: ENSMUST00000113717.7

Sptan1-204, Transcript of Spectrin alpha chain, non-erythrocytic 1, mousemouse

TSL 1 (best) BASIC

Gene Sptan1, Length 7,958 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptan1-204ENSMUST00000113717 Fam193aQ8CGI1 1231 aaKnown RBP13.22□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Smc4Q8CG47 1286 aa13.22□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Gprasp1Q5U4C1 1347 aa13.22□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Phactr2B1AVP0 632 aa13.21□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Smc3Q9CW03 1217 aaKnown RBP13.21□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Kif7B7ZNG0 1348 aa13.21□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Ap3b2Q9JME5 1082 aa13.21□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Rab11fip3Q8CHD8 1047 aa13.2□□□□□ -0.3
Sptan1-204ENSMUST00000113717 Gpatch3Q8BIY1 525 aa13.2□□□□□ -0.3
Sptan1-204ENSMUST00000113717 Ipo4Q8VI75 1082 aa13.2□□□□□ -0.3
Sptan1-204ENSMUST00000113717 Cc2d1aQ8K1A6 943 aa13.2□□□□□ -0.3
Sptan1-204ENSMUST00000113717 NaspQ99MD9 773 aaKnown RBP13.2□□□□□ -0.3
Sptan1-204ENSMUST00000113717 Rsph4aQ8BYM7 716 aa13.2□□□□□ -0.3
Sptan1-204ENSMUST00000113717 PhaxQ9JJT9 385 aaKnown RBP13.2□□□□□ -0.3
Sptan1-204ENSMUST00000113717 Rapgef2Q8CHG7 1496 aa13.19□□□□□ -0.3
Sptan1-204ENSMUST00000113717 Kif3aP28741 701 aa13.19□□□□□ -0.3
Sptan1-204ENSMUST00000113717 Utp14aQ640M1 767 aaKnown RBP13.19□□□□□ -0.3
Sptan1-204ENSMUST00000113717 Dapk1Q80YE7 1442 aa13.19□□□□□ -0.3
Sptan1-204ENSMUST00000113717 Ccnb3Q810T2 1396 aa13.19□□□□□ -0.3
Sptan1-204ENSMUST00000113717 Esx1O88933 382 aa13.18□□□□□ -0.3
Sptan1-204ENSMUST00000113717 Cwc15Q9JHS9 229 aaKnown RBP13.18□□□□□ -0.3
Sptan1-204ENSMUST00000113717 Prkrip1Q9CWV6 186 aaKnown RBP13.18□□□□□ -0.3
Sptan1-204ENSMUST00000113717 Fam184bQ0KK56 942 aa13.18□□□□□ -0.3
Sptan1-204ENSMUST00000113717 KarsQ99MN1 595 aaKnown RBP13.18□□□□□ -0.3
Sptan1-204ENSMUST00000113717 Odf2A3KGV1 830 aaKnown RBP13.18□□□□□ -0.3
Sptan1-204ENSMUST00000113717 Plcd4Q8K3R3 807 aa13.17□□□□□ -0.3
Sptan1-204ENSMUST00000113717 Ciz1Q8VEH2 845 aa13.17□□□□□ -0.3
Sptan1-204ENSMUST00000113717 PrkcshO08795 521 aa13.16□□□□□ -0.3
Sptan1-204ENSMUST00000113717 Chaf1aQ9QWF0 911 aa13.16□□□□□ -0.3
Sptan1-204ENSMUST00000113717 Cabp4Q8VHC5 271 aa13.16□□□□□ -0.3
Sptan1-204ENSMUST00000113717 Pds5bQ4VA53 1446 aaKnown RBP13.16□□□□□ -0.3
Sptan1-204ENSMUST00000113717 Mns1Q61884 491 aa13.15□□□□□ -0.3
Sptan1-204ENSMUST00000113717 Cetn4Q8K4K1 168 aa13.15□□□□□ -0.3
Sptan1-204ENSMUST00000113717 Ccdc183A2AJB1 534 aa13.15□□□□□ -0.3
Sptan1-204ENSMUST00000113717 Triml2E9PW10 424 aa13.15□□□□□ -0.3
Sptan1-204ENSMUST00000113717 Ubxn4Q8VCH8 506 aa13.15□□□□□ -0.3
Sptan1-204ENSMUST00000113717 Rrp9Q91WM3 475 aaKnown RBP13.15□□□□□ -0.3
Sptan1-204ENSMUST00000113717 Cchcr1Q8K2I2 770 aa13.15□□□□□ -0.3
Sptan1-204ENSMUST00000113717 Ccdc43Q9CR29 222 aaKnown RBP13.14□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Mad1l1Q9WTX8 717 aaKnown RBP13.14□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Zscan10Q3URR7 782 aa13.14□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Podxl2Q8CAE9 603 aa13.14□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Ccdc30Q8BVF4 654 aa13.14□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Hnrnpul1Q8VDM6 859 aaKnown RBP13.14□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Q9D2X8 372 aa13.14□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Kif3cO35066 796 aa13.14□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Usp40Q8BWR4 1235 aa13.14□□□□□ -0.31
Sptan1-204ENSMUST00000113717 PogkQ80TC5 607 aa13.14□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Fam13bQ8K2H3 851 aa13.14□□□□□ -0.31
Sptan1-204ENSMUST00000113717 A0A0U1RNP2 1173 aa13.13□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Erc2Q6PH08 957 aa13.13□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Pak3Q61036 559 aa13.13□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Carmil1Q6EDY6 1374 aa13.12□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Plekhh1Q80TI1 1356 aa13.12□□□□□ -0.31
Sptan1-204ENSMUST00000113717 HmmrQ00547 794 aaKnown RBP13.12□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Necab1Q8BG18 352 aa13.12□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Ankrd36D3Z4K0 1415 aa13.12□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Ttll13A4Q9F6 804 aa13.12□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Cdkn1cP49919 348 aa13.12□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Chmp4cQ9D7F7 232 aa13.11□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Cux1P53564 1515 aa13.11□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Sart1Q9Z315 806 aaKnown RBP13.11□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Rnf214Q8BFU3 668 aaKnown RBP13.11□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Ric3Q8BPM6 367 aa13.11□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Dctn1O08788 1281 aa13.11□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Wdr78E9PYY5 807 aa13.1□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Usp48Q3V0C5 1052 aa13.1□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Hap1O35668 628 aa13.1□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Prm3Q62100 101 aa13.1□□□□□ -0.31
Sptan1-204ENSMUST00000113717 PdcQ9QW08 244 aa13.1□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Ubap1lG3UW59 384 aa13.09□□□□□ -0.31
Sptan1-204ENSMUST00000113717 March6Q6ZQ89 909 aa13.09□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Ccp110Q7TSH4 1004 aa13.09□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Pank1Q8K4K6 548 aa13.09□□□□□ -0.31
Sptan1-204ENSMUST00000113717 CalrP14211 416 aaKnown RBP13.09□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Hmox1P14901 289 aa13.09□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Neurod6P48986 337 aa13.09□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Usp16Q99LG0 825 aa13.09□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Psma5Q9Z2U1 241 aaKnown RBP13.09□□□□□ -0.31
Sptan1-204ENSMUST00000113717 CrcpO35427 148 aa13.09□□□□□ -0.31
Sptan1-204ENSMUST00000113717 Nap1l1P28656 391 aaKnown RBP13.08□□□□□ -0.32
Sptan1-204ENSMUST00000113717 SkilQ60665 675 aa13.08□□□□□ -0.32
Sptan1-204ENSMUST00000113717 Gnai1B2RSH2 354 aa13.08□□□□□ -0.32
Sptan1-204ENSMUST00000113717 Gnai3Q9DC51 354 aa13.08□□□□□ -0.32
Sptan1-204ENSMUST00000113717 Nek4Q9Z1J2 792 aa13.08□□□□□ -0.32
Sptan1-204ENSMUST00000113717 Dhx16G3X8X0 1044 aaKnown RBP13.08□□□□□ -0.32
Sptan1-204ENSMUST00000113717 Rpgrip1lQ8CG73 1264 aa13.08□□□□□ -0.32
Sptan1-204ENSMUST00000113717 FosbP13346 338 aa13.07□□□□□ -0.32
Sptan1-204ENSMUST00000113717 Polr1aO35134 1717 aaKnown RBP13.07□□□□□ -0.32
Sptan1-204ENSMUST00000113717 Ints3Q7TPD0 1041 aaKnown RBP13.07□□□□□ -0.32
Sptan1-204ENSMUST00000113717 Phf14Q9D4H9 881 aa13.07□□□□□ -0.32
Sptan1-204ENSMUST00000113717 Ppp2r3aB2RXC8 1150 aa13.07□□□□□ -0.32
Sptan1-204ENSMUST00000113717 Znf771Q8BJ90 317 aa13.07□□□□□ -0.32
Sptan1-204ENSMUST00000113717 Cfap99A0A140LIX9 648 aa13.07□□□□□ -0.32
Sptan1-204ENSMUST00000113717 Chmp7Q8R1T1 451 aa13.07□□□□□ -0.32
Sptan1-204ENSMUST00000113717 Trim29Q8R2Q0 587 aa13.07□□□□□ -0.32
Sptan1-204ENSMUST00000113717 Cttnbp2B9EJA2 1648 aa13.07□□□□□ -0.32
Sptan1-204ENSMUST00000113717 Nol12Q8BG17 217 aa13.07□□□□□ -0.32
Sptan1-204ENSMUST00000113717 Znf710Q3U288 666 aa13.06□□□□□ -0.32
Sptan1-204ENSMUST00000113717 Synj1Q8CHC4 1574 aa13.06□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms