RNA–Protein interactions for RNA: ENSMUST00000110505.7

Hmgb1-203, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,720 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-203ENSMUST00000110505 AqrQ8CFQ3 1481 aaKnown RBP7.52□□□□□ -1.21
Hmgb1-203ENSMUST00000110505 Abcc1O35379 1528 aa7.51□□□□□ -1.21
Hmgb1-203ENSMUST00000110505 Rapgef2Q8CHG7 1496 aa7.51□□□□□ -1.21
Hmgb1-203ENSMUST00000110505 Ythdc2B2RR83 1445 aaKnown RBP7.51□□□□□ -1.21
Hmgb1-203ENSMUST00000110505 Pbrm1Q8BSQ9 1634 aaKnown RBP7.51□□□□□ -1.21
Hmgb1-203ENSMUST00000110505 UbtfP25976 765 aaKnown RBP7.51□□□□□ -1.21
Hmgb1-203ENSMUST00000110505 Retreg3Q9CQV4 466 aa7.51□□□□□ -1.21
Hmgb1-203ENSMUST00000110505 Grin2aP35436 1464 aa7.51□□□□□ -1.21
Hmgb1-203ENSMUST00000110505 Cnksr2Q80YA9 1032 aa7.5□□□□□ -1.21
Hmgb1-203ENSMUST00000110505 Traf7Q922B6 594 aa7.5□□□□□ -1.21
Hmgb1-203ENSMUST00000110505 Magi3Q9EQJ9 1476 aa7.5□□□□□ -1.21
Hmgb1-203ENSMUST00000110505 Gm4788E9Q8B5 879 aa7.49□□□□□ -1.21
Hmgb1-203ENSMUST00000110505 Ppp1r18Q8BQ30 594 aa7.49□□□□□ -1.21
Hmgb1-203ENSMUST00000110505 Top2aQ01320 1528 aaKnown RBP7.49□□□□□ -1.21
Hmgb1-203ENSMUST00000110505 FurinP23188 793 aa7.49□□□□□ -1.21
Hmgb1-203ENSMUST00000110505 Cdca7lQ922M5 438 aa7.49□□□□□ -1.21
Hmgb1-203ENSMUST00000110505 Pde8bE9Q4S1 865 aa7.48□□□□□ -1.21
Hmgb1-203ENSMUST00000110505 Col9a1Q05722 921 aa7.48□□□□□ -1.21
Hmgb1-203ENSMUST00000110505 Znf423Q80TS5 1292 aa7.48□□□□□ -1.21
Hmgb1-203ENSMUST00000110505 Tpcn2Q8BWC0 731 aa7.47□□□□□ -1.21
Hmgb1-203ENSMUST00000110505 Trim32Q8CH72 655 aa7.47□□□□□ -1.21
Hmgb1-203ENSMUST00000110505 Fmn1Q05860 1466 aa7.47□□□□□ -1.21
Hmgb1-203ENSMUST00000110505 Supt5hO55201 1082 aaKnown RBP7.47□□□□□ -1.21
Hmgb1-203ENSMUST00000110505 ChgaP26339 463 aaKnown RBP7.47□□□□□ -1.21
Hmgb1-203ENSMUST00000110505 XpcP51612 930 aa7.47□□□□□ -1.21
Hmgb1-203ENSMUST00000110505 Wdr44Q6NVE8 915 aa7.47□□□□□ -1.21
Hmgb1-203ENSMUST00000110505 Setbp1Q9Z180 1582 aa7.46□□□□□ -1.22
Hmgb1-203ENSMUST00000110505 Bcl11bQ99PV8 884 aa7.44□□□□□ -1.22
Hmgb1-203ENSMUST00000110505 Chd1P40201 1711 aa7.44□□□□□ -1.22
Hmgb1-203ENSMUST00000110505 Efcab5A0JP43 1406 aa7.44□□□□□ -1.22
Hmgb1-203ENSMUST00000110505 Pla2r1Q62028 1487 aa7.44□□□□□ -1.22
Hmgb1-203ENSMUST00000110505 Rgs9O54828 675 aa7.44□□□□□ -1.22
Hmgb1-203ENSMUST00000110505 Tie1Q06806 1134 aa7.44□□□□□ -1.22
Hmgb1-203ENSMUST00000110505 Map3k9Q3U1V8 1077 aa7.44□□□□□ -1.22
Hmgb1-203ENSMUST00000110505 RydenQ8CAK3 290 aaKnown RBP7.44□□□□□ -1.22
Hmgb1-203ENSMUST00000110505 Soga1E1U8D0 1418 aa7.43□□□□□ -1.22
Hmgb1-203ENSMUST00000110505 Neo1P97798 1493 aa7.43□□□□□ -1.22
Hmgb1-203ENSMUST00000110505 CadpsQ80TJ1 1355 aa7.43□□□□□ -1.22
Hmgb1-203ENSMUST00000110505 Caskin2Q8VHK1 1201 aa7.43□□□□□ -1.22
Hmgb1-203ENSMUST00000110505 Prpmp5E9PXN1 296 aa7.42□□□□□ -1.22
Hmgb1-203ENSMUST00000110505 Arid5bQ8BM75 1188 aaKnown RBP7.42□□□□□ -1.22
Hmgb1-203ENSMUST00000110505 Kcnn2P58390 839 aa7.41□□□□□ -1.22
Hmgb1-203ENSMUST00000110505 VaspP70460 375 aaKnown RBP7.41□□□□□ -1.22
Hmgb1-203ENSMUST00000110505 Prr7Q3V0I2 269 aa7.41□□□□□ -1.22
Hmgb1-203ENSMUST00000110505 Ciz1Q8VEH2 845 aa7.41□□□□□ -1.22
Hmgb1-203ENSMUST00000110505 Q9CQ90 155 aa7.41□□□□□ -1.22
Hmgb1-203ENSMUST00000110505 BC005561E9Q5E2 1589 aa7.41□□□□□ -1.22
Hmgb1-203ENSMUST00000110505 Arhgap27A2AB59 869 aa7.41□□□□□ -1.22
Hmgb1-203ENSMUST00000110505 Ankrd34aB2RW11 495 aa7.41□□□□□ -1.22
Hmgb1-203ENSMUST00000110505 Pxylp1Q8BHA9 480 aa7.41□□□□□ -1.22
Hmgb1-203ENSMUST00000110505 Dnmt1P13864 1620 aaKnown RBP7.4□□□□□ -1.22
Hmgb1-203ENSMUST00000110505 Ak9G3UYQ4 1894 aa7.39□□□□□ -1.23
Hmgb1-203ENSMUST00000110505 Hs1bp3Q3TC93 395 aa7.39□□□□□ -1.23
Hmgb1-203ENSMUST00000110505 Rnf40Q3U319 1001 aa7.39□□□□□ -1.23
Hmgb1-203ENSMUST00000110505 Abcc2Q8VI47 1543 aa7.38□□□□□ -1.23
Hmgb1-203ENSMUST00000110505 Adra2bP30545 450 aa7.38□□□□□ -1.23
Hmgb1-203ENSMUST00000110505 Large2Q5XPT3 690 aa7.38□□□□□ -1.23
Hmgb1-203ENSMUST00000110505 Gm14025A2AP89 1413 aa7.38□□□□□ -1.23
Hmgb1-203ENSMUST00000110505 AI481877A2ALV5 1481 aa7.38□□□□□ -1.23
Hmgb1-203ENSMUST00000110505 PxdnQ3UQ28 1475 aa7.38□□□□□ -1.23
Hmgb1-203ENSMUST00000110505 Ccdc88bQ4QRL3 1481 aa7.38□□□□□ -1.23
Hmgb1-203ENSMUST00000110505 Tsen34Q8BMZ5 316 aa7.38□□□□□ -1.23
Hmgb1-203ENSMUST00000110505 SmapQ9R0P4 181 aaKnown RBP7.38□□□□□ -1.23
Hmgb1-203ENSMUST00000110505 Alkbh8Q80Y20 664 aa7.37□□□□□ -1.23
Hmgb1-203ENSMUST00000110505 SynmQ70IV5 1561 aa7.37□□□□□ -1.23
Hmgb1-203ENSMUST00000110505 Rpusd2Q149F1 553 aa7.36□□□□□ -1.23
Hmgb1-203ENSMUST00000110505 Arid3cA6PWV5 409 aa7.35□□□□□ -1.23
Hmgb1-203ENSMUST00000110505 Fkbp15Q6P9Q6 1216 aaKnown RBP7.35□□□□□ -1.23
Hmgb1-203ENSMUST00000110505 Ric3Q8BPM6 367 aa7.35□□□□□ -1.23
Hmgb1-203ENSMUST00000110505 E2f4Q8R0K9 410 aa7.35□□□□□ -1.23
Hmgb1-203ENSMUST00000110505 Map3k4O08648 1597 aa7.35□□□□□ -1.23
Hmgb1-203ENSMUST00000110505 Abca16E9PWJ7 1678 aa7.35□□□□□ -1.23
Hmgb1-203ENSMUST00000110505 Alpk3Q924C5 1678 aa7.35□□□□□ -1.23
Hmgb1-203ENSMUST00000110505 EprsQ8CGC7 1512 aaKnown RBP7.35□□□□□ -1.23
Hmgb1-203ENSMUST00000110505 Aldh16a1Q571I9 802 aa7.35□□□□□ -1.23
Hmgb1-203ENSMUST00000110505 Os9Q8K2C7 672 aa7.35□□□□□ -1.23
Hmgb1-203ENSMUST00000110505 Depdc5P61460 1591 aa7.34□□□□□ -1.23
Hmgb1-203ENSMUST00000110505 WizO88286 1684 aaKnown RBP7.34□□□□□ -1.23
Hmgb1-203ENSMUST00000110505 Ttc37F8VPK0 1563 aa7.34□□□□□ -1.24
Hmgb1-203ENSMUST00000110505 Mapkbp1Q6NS57 1503 aa7.34□□□□□ -1.24
Hmgb1-203ENSMUST00000110505 NrkQ9R0G8 1455 aa7.33□□□□□ -1.24
Hmgb1-203ENSMUST00000110505 AdgbG3UZ78 1657 aa7.33□□□□□ -1.24
Hmgb1-203ENSMUST00000110505 TchhA0A0B4J1F9 1599 aa7.33□□□□□ -1.24
Hmgb1-203ENSMUST00000110505 Cyp7a1Q64505 503 aa7.32□□□□□ -1.24
Hmgb1-203ENSMUST00000110505 MlecQ6ZQI3 291 aaKnown RBP7.32□□□□□ -1.24
Hmgb1-203ENSMUST00000110505 Clasp1Q80TV8 1535 aaKnown RBP7.32□□□□□ -1.24
Hmgb1-203ENSMUST00000110505 Arhgef12Q8R4H2 1543 aaKnown RBP7.32□□□□□ -1.24
Hmgb1-203ENSMUST00000110505 Shroom4Q1W617 1475 aa7.32□□□□□ -1.24
Hmgb1-203ENSMUST00000110505 Eif4g1Q6NZJ6 1600 aaKnown RBP7.32□□□□□ -1.24
Hmgb1-203ENSMUST00000110505 Slc7a3P70423 618 aa7.32□□□□□ -1.24
Hmgb1-203ENSMUST00000110505 Psme1P97371 249 aa7.32□□□□□ -1.24
Hmgb1-203ENSMUST00000110505 Thsd4Q3UTY6 1018 aa7.32□□□□□ -1.24
Hmgb1-203ENSMUST00000110505 Sp7Q8VI67 428 aa7.31□□□□□ -1.24
Hmgb1-203ENSMUST00000110505 Tmem52Q9D702 196 aa7.31□□□□□ -1.24
Hmgb1-203ENSMUST00000110505 ColqO35348 457 aa7.3□□□□□ -1.24
Hmgb1-203ENSMUST00000110505 Slain2Q8CI08 581 aa7.3□□□□□ -1.24
Hmgb1-203ENSMUST00000110505 Arhgef11Q68FM7 1552 aa7.3□□□□□ -1.24
Hmgb1-203ENSMUST00000110505 Slx4Q6P1D7 1565 aa7.3□□□□□ -1.24
Hmgb1-203ENSMUST00000110505 Znf608Q56A10 1511 aa7.3□□□□□ -1.24
Hmgb1-203ENSMUST00000110505 Cops2P61202 443 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 35.3 ms