RNA–Protein interactions for RNA: ENSMUST00000106612.7

Sox6-202, Transcript of Transcription factor SOX-6, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sox6, Length 8,193 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6-202ENSMUST00000106612 Dnai2A2AC93 623 aa9.65□□□□□ -0.86
Sox6-202ENSMUST00000106612 KarsQ99MN1 595 aaKnown RBP9.65□□□□□ -0.86
Sox6-202ENSMUST00000106612 Ipo4Q8VI75 1082 aa9.65□□□□□ -0.87
Sox6-202ENSMUST00000106612 Hmgn5Q9JL35 406 aa9.65□□□□□ -0.87
Sox6-202ENSMUST00000106612 Efcab5A0JP43 1406 aa9.64□□□□□ -0.87
Sox6-202ENSMUST00000106612 Tpm3P21107 285 aaKnown RBP9.64□□□□□ -0.87
Sox6-202ENSMUST00000106612 Stk31Q99MW1 1018 aa9.64□□□□□ -0.87
Sox6-202ENSMUST00000106612 WrnO09053 1401 aa9.64□□□□□ -0.87
Sox6-202ENSMUST00000106612 Ppp2r3aB2RXC8 1150 aa9.64□□□□□ -0.87
Sox6-202ENSMUST00000106612 Kif3aP28741 701 aa9.64□□□□□ -0.87
Sox6-202ENSMUST00000106612 Nsd2Q8BVE8 1365 aa9.63□□□□□ -0.87
Sox6-202ENSMUST00000106612 Usp40Q8BWR4 1235 aa9.63□□□□□ -0.87
Sox6-202ENSMUST00000106612 Zfp444Q3TDV8 331 aaKnown RBP9.63□□□□□ -0.87
Sox6-202ENSMUST00000106612 Gtf2a1Q99PM3 378 aa9.63□□□□□ -0.87
Sox6-202ENSMUST00000106612 Plekhg5Q66T02 1073 aa9.63□□□□□ -0.87
Sox6-202ENSMUST00000106612 Rab11fip3Q8CHD8 1047 aa9.63□□□□□ -0.87
Sox6-202ENSMUST00000106612 Rab3gap2Q8BMG7 1366 aa9.63□□□□□ -0.87
Sox6-202ENSMUST00000106612 Srek1Q8BZX4 494 aaKnown RBP9.62□□□□□ -0.87
Sox6-202ENSMUST00000106612 Ccdc47Q9D024 483 aaKnown RBP9.62□□□□□ -0.87
Sox6-202ENSMUST00000106612 Tpd52l1O54818 204 aa9.62□□□□□ -0.87
Sox6-202ENSMUST00000106612 Ccdc171E9Q1U1 1324 aa9.62□□□□□ -0.87
Sox6-202ENSMUST00000106612 1700010I14RikQ7TPG0 532 aa9.62□□□□□ -0.87
Sox6-202ENSMUST00000106612 Tnnt1O88346 262 aa9.61□□□□□ -0.87
Sox6-202ENSMUST00000106612 Mcm2P97310 904 aa9.61□□□□□ -0.87
Sox6-202ENSMUST00000106612 SkilQ60665 675 aa9.61□□□□□ -0.87
Sox6-202ENSMUST00000106612 Pank1Q8K4K6 548 aa9.61□□□□□ -0.87
Sox6-202ENSMUST00000106612 Top2bQ64511 1612 aa9.61□□□□□ -0.87
Sox6-202ENSMUST00000106612 Psme1P97371 249 aa9.61□□□□□ -0.87
Sox6-202ENSMUST00000106612 Myom3A2ABU4 1439 aa9.6□□□□□ -0.87
Sox6-202ENSMUST00000106612 Tpm1P58771 284 aa9.6□□□□□ -0.87
Sox6-202ENSMUST00000106612 Ccdc34Q3UI66 367 aa9.6□□□□□ -0.87
Sox6-202ENSMUST00000106612 Pibf1E9Q6K3 756 aa9.59□□□□□ -0.87
Sox6-202ENSMUST00000106612 Rnf20Q5DTM8 973 aa9.59□□□□□ -0.87
Sox6-202ENSMUST00000106612 ErbinQ80TH2 1402 aa9.59□□□□□ -0.87
Sox6-202ENSMUST00000106612 Gnai1B2RSH2 354 aa9.59□□□□□ -0.87
Sox6-202ENSMUST00000106612 Gnai3Q9DC51 354 aa9.59□□□□□ -0.87
Sox6-202ENSMUST00000106612 Cchcr1Q8K2I2 770 aa9.59□□□□□ -0.87
Sox6-202ENSMUST00000106612 Slc4a10Q5DTL9 1118 aa9.59□□□□□ -0.87
Sox6-202ENSMUST00000106612 Tnpo1Q8BFY9 898 aaKnown RBP9.59□□□□□ -0.87
Sox6-202ENSMUST00000106612 Utp14aQ640M1 767 aaKnown RBP9.59□□□□□ -0.87
Sox6-202ENSMUST00000106612 Tdrd9Q14BI7 1383 aa9.59□□□□□ -0.87
Sox6-202ENSMUST00000106612 TchhA0A0B4J1F9 1599 aa9.59□□□□□ -0.87
Sox6-202ENSMUST00000106612 Kif20aP97329 887 aa9.58□□□□□ -0.88
Sox6-202ENSMUST00000106612 A0A1L1SQF0 893 aa9.58□□□□□ -0.88
Sox6-202ENSMUST00000106612 Smc3Q9CW03 1217 aaKnown RBP9.58□□□□□ -0.88
Sox6-202ENSMUST00000106612 Txndc2Q6P902 515 aa9.57□□□□□ -0.88
Sox6-202ENSMUST00000106612 Fez1Q8K0X8 392 aa9.57□□□□□ -0.88
Sox6-202ENSMUST00000106612 Arid3cA6PWV5 409 aa9.57□□□□□ -0.88
Sox6-202ENSMUST00000106612 Ddx11Q6AXC6 880 aa9.57□□□□□ -0.88
Sox6-202ENSMUST00000106612 Anp32eP97822 260 aaKnown RBP9.57□□□□□ -0.88
Sox6-202ENSMUST00000106612 Phactr2B1AVP0 632 aa9.57□□□□□ -0.88
Sox6-202ENSMUST00000106612 Triml2E9PW10 424 aa9.57□□□□□ -0.88
Sox6-202ENSMUST00000106612 Chmp3Q9CQ10 224 aa9.57□□□□□ -0.88
Sox6-202ENSMUST00000106612 Q9D2X8 372 aa9.57□□□□□ -0.88
Sox6-202ENSMUST00000106612 Zkscan1Q8BGS3 561 aaKnown RBP9.56□□□□□ -0.88
Sox6-202ENSMUST00000106612 Evc2Q8K1G2 1220 aa9.56□□□□□ -0.88
Sox6-202ENSMUST00000106612 NaspQ99MD9 773 aaKnown RBP9.56□□□□□ -0.88
Sox6-202ENSMUST00000106612 Senp3Q9EP97 568 aaKnown RBP9.56□□□□□ -0.88
Sox6-202ENSMUST00000106612 Ppp2r1aQ76MZ3 589 aa9.56□□□□□ -0.88
Sox6-202ENSMUST00000106612 Swt1Q9DBQ9 907 aa9.56□□□□□ -0.88
Sox6-202ENSMUST00000106612 Bicd2Q921C5 820 aa9.56□□□□□ -0.88
Sox6-202ENSMUST00000106612 Zrsr2Q62377 462 aaKnown RBP9.56□□□□□ -0.88
Sox6-202ENSMUST00000106612 Tceal9Q9DD24 104 aa9.56□□□□□ -0.88
Sox6-202ENSMUST00000106612 Sptbn5F6UCX4 1208 aa9.55□□□□□ -0.88
Sox6-202ENSMUST00000106612 Cplx2P84086 134 aa9.55□□□□□ -0.88
Sox6-202ENSMUST00000106612 Ric3Q8BPM6 367 aa9.55□□□□□ -0.88
Sox6-202ENSMUST00000106612 PhaxQ9JJT9 385 aaKnown RBP9.55□□□□□ -0.88
Sox6-202ENSMUST00000106612 Mroh2bQ7M6Y6 1581 aa9.55□□□□□ -0.88
Sox6-202ENSMUST00000106612 Ecm2Q5FW85 670 aa9.55□□□□□ -0.88
Sox6-202ENSMUST00000106612 Nek4Q9Z1J2 792 aa9.55□□□□□ -0.88
Sox6-202ENSMUST00000106612 Dixdc1Q80Y83 711 aa9.55□□□□□ -0.88
Sox6-202ENSMUST00000106612 Rbm25B2RY56 838 aaKnown RBP9.55□□□□□ -0.88
Sox6-202ENSMUST00000106612 AnlnQ8K298 1121 aaKnown RBP9.55□□□□□ -0.88
Sox6-202ENSMUST00000106612 PdcQ9QW08 244 aa9.55□□□□□ -0.88
Sox6-202ENSMUST00000106612 Hoxa7P02830 229 aa9.55□□□□□ -0.88
Sox6-202ENSMUST00000106612 Erc2Q6PH08 957 aa9.54□□□□□ -0.88
Sox6-202ENSMUST00000106612 Ipo7Q9EPL8 1038 aaKnown RBP9.54□□□□□ -0.88
Sox6-202ENSMUST00000106612 Hook1Q8BIL5 728 aa9.54□□□□□ -0.88
Sox6-202ENSMUST00000106612 Gpatch3Q8BIY1 525 aa9.54□□□□□ -0.88
Sox6-202ENSMUST00000106612 Cdkn1cP49919 348 aa9.54□□□□□ -0.88
Sox6-202ENSMUST00000106612 Ubxn4Q8VCH8 506 aa9.54□□□□□ -0.88
Sox6-202ENSMUST00000106612 Q7TT23 1179 aa9.54□□□□□ -0.88
Sox6-202ENSMUST00000106612 Gabpb2P81069 414 aa9.54□□□□□ -0.88
Sox6-202ENSMUST00000106612 Prdm16A2A935 1275 aa9.54□□□□□ -0.88
Sox6-202ENSMUST00000106612 Ints3Q7TPD0 1041 aaKnown RBP9.54□□□□□ -0.88
Sox6-202ENSMUST00000106612 Usp16Q99LG0 825 aa9.54□□□□□ -0.88
Sox6-202ENSMUST00000106612 HdgfP51859 237 aaKnown RBP9.53□□□□□ -0.88
Sox6-202ENSMUST00000106612 Znhit6Q3UFB2 460 aaKnown RBP9.53□□□□□ -0.88
Sox6-202ENSMUST00000106612 Tpm4Q6IRU2 248 aa9.53□□□□□ -0.88
Sox6-202ENSMUST00000106612 Ap3b2Q9JME5 1082 aa9.53□□□□□ -0.88
Sox6-202ENSMUST00000106612 Cyp46a1Q9WVK8 500 aa9.53□□□□□ -0.88
Sox6-202ENSMUST00000106612 Cd109Q8R422 1442 aa9.53□□□□□ -0.88
Sox6-202ENSMUST00000106612 Pnmal2G3X9N3 661 aa9.53□□□□□ -0.88
Sox6-202ENSMUST00000106612 Gcc1Q9D4H2 778 aa9.53□□□□□ -0.88
Sox6-202ENSMUST00000106612 Dhx8A2A4P0 1244 aaKnown RBP9.52□□□□□ -0.88
Sox6-202ENSMUST00000106612 PogkQ80TC5 607 aa9.52□□□□□ -0.88
Sox6-202ENSMUST00000106612 FanciQ8K368 1330 aa9.52□□□□□ -0.89
Sox6-202ENSMUST00000106612 Cavin4A2AMM0 362 aa9.52□□□□□ -0.89
Sox6-202ENSMUST00000106612 Smc4Q8CG47 1286 aa9.52□□□□□ -0.89
Sox6-202ENSMUST00000106612 Tomm22Q9CPQ3 142 aa9.52□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms