RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 Cgnl1Q6AW69 1298 aa18.39■□□□□ 0.53
Chd3-201ENSMUST00000092971 Znf771Q8BJ90 317 aa18.39■□□□□ 0.53
Chd3-201ENSMUST00000092971 Fam13bQ8K2H3 851 aa18.39■□□□□ 0.53
Chd3-201ENSMUST00000092971 Sytl4Q9R0Q1 673 aa18.38■□□□□ 0.53
Chd3-201ENSMUST00000092971 Plcd4Q8K3R3 807 aa18.38■□□□□ 0.53
Chd3-201ENSMUST00000092971 CntlnA2AM05 1397 aa18.38■□□□□ 0.53
Chd3-201ENSMUST00000092971 Themis2Q91YX0 663 aa18.38■□□□□ 0.53
Chd3-201ENSMUST00000092971 Lemd3Q9WU40 921 aa18.38■□□□□ 0.53
Chd3-201ENSMUST00000092971 Usp48Q3V0C5 1052 aa18.37■□□□□ 0.53
Chd3-201ENSMUST00000092971 Nutm1Q8BHP2 1126 aa18.37■□□□□ 0.53
Chd3-201ENSMUST00000092971 Babam1Q3UI43 333 aa18.37■□□□□ 0.53
Chd3-201ENSMUST00000092971 Smc3Q9CW03 1217 aaKnown RBP18.37■□□□□ 0.53
Chd3-201ENSMUST00000092971 Q8C5K5 320 aa18.36■□□□□ 0.53
Chd3-201ENSMUST00000092971 Bcl2l13P59017 434 aa18.36■□□□□ 0.53
Chd3-201ENSMUST00000092971 CrcpO35427 148 aa18.36■□□□□ 0.53
Chd3-201ENSMUST00000092971 Hmox1P14901 289 aa18.36■□□□□ 0.53
Chd3-201ENSMUST00000092971 Nectin2P32507 530 aa18.36■□□□□ 0.53
Chd3-201ENSMUST00000092971 KinQ8K339 391 aa18.36■□□□□ 0.53
Chd3-201ENSMUST00000092971 Inpp5dQ9ES52 1191 aa18.36■□□□□ 0.53
Chd3-201ENSMUST00000092971 Abl1P00520 1123 aa18.35■□□□□ 0.53
Chd3-201ENSMUST00000092971 Gcom1E9PZ54 550 aa18.35■□□□□ 0.53
Chd3-201ENSMUST00000092971 MyzapQ3UIJ9 466 aa18.35■□□□□ 0.53
Chd3-201ENSMUST00000092971 Mre11Q61216 706 aa18.35■□□□□ 0.53
Chd3-201ENSMUST00000092971 Klf15Q9EPW2 415 aa18.35■□□□□ 0.53
Chd3-201ENSMUST00000092971 Q9D2X8 372 aa18.34■□□□□ 0.53
Chd3-201ENSMUST00000092971 Evc2Q8K1G2 1220 aa18.34■□□□□ 0.53
Chd3-201ENSMUST00000092971 HmmrQ00547 794 aaKnown RBP18.33■□□□□ 0.53
Chd3-201ENSMUST00000092971 Anp32eP97822 260 aaKnown RBP18.33■□□□□ 0.52
Chd3-201ENSMUST00000092971 Commd10Q8JZY2 202 aa18.33■□□□□ 0.52
Chd3-201ENSMUST00000092971 Rbm10Q99KG3 930 aaKnown RBP18.33■□□□□ 0.52
Chd3-201ENSMUST00000092971 Smc4Q8CG47 1286 aa18.32■□□□□ 0.52
Chd3-201ENSMUST00000092971 Ddx11Q6AXC6 880 aa18.32■□□□□ 0.52
Chd3-201ENSMUST00000092971 Hook1Q8BIL5 728 aa18.32■□□□□ 0.52
Chd3-201ENSMUST00000092971 BbxQ8VBW5 907 aa18.32■□□□□ 0.52
Chd3-201ENSMUST00000092971 Kdm4aQ8BW72 1064 aa18.32■□□□□ 0.52
Chd3-201ENSMUST00000092971 Esx1O88933 382 aa18.32■□□□□ 0.52
Chd3-201ENSMUST00000092971 4933402E13RikQ9D4D2 429 aa18.31■□□□□ 0.52
Chd3-201ENSMUST00000092971 Stk3Q9JI10 497 aa18.31■□□□□ 0.52
Chd3-201ENSMUST00000092971 Gpatch3Q8BIY1 525 aa18.31■□□□□ 0.52
Chd3-201ENSMUST00000092971 Aebp1Q640N1 1128 aa18.31■□□□□ 0.52
Chd3-201ENSMUST00000092971 Ccar2Q8VDP4 922 aaKnown RBP18.3■□□□□ 0.52
Chd3-201ENSMUST00000092971 Tmc1Q8R4P5 757 aa18.29■□□□□ 0.52
Chd3-201ENSMUST00000092971 A0A1L1SQF0 893 aa18.29■□□□□ 0.52
Chd3-201ENSMUST00000092971 KarsQ99MN1 595 aaKnown RBP18.29■□□□□ 0.52
Chd3-201ENSMUST00000092971 CenpjQ569L8 1344 aa18.29■□□□□ 0.52
Chd3-201ENSMUST00000092971 Mink1Q9JM52 1308 aa18.29■□□□□ 0.52
Chd3-201ENSMUST00000092971 Fmnl2A2APV2 1086 aa18.28■□□□□ 0.52
Chd3-201ENSMUST00000092971 Mex3cQ05A36 652 aaKnown RBP18.28■□□□□ 0.52
Chd3-201ENSMUST00000092971 Rpap1Q80TE0 1409 aa18.28■□□□□ 0.52
Chd3-201ENSMUST00000092971 Nup155Q99P88 1391 aaKnown RBP18.27■□□□□ 0.52
Chd3-201ENSMUST00000092971 Eva1cP58659 440 aa18.27■□□□□ 0.52
Chd3-201ENSMUST00000092971 GsdmaQ9EST1 446 aa18.27■□□□□ 0.52
Chd3-201ENSMUST00000092971 Me1P06801 572 aa18.27■□□□□ 0.51
Chd3-201ENSMUST00000092971 Glipr1l2Q9CQ35 332 aa18.27■□□□□ 0.51
Chd3-201ENSMUST00000092971 Dusp9Q7TNL7 452 aa18.26■□□□□ 0.51
Chd3-201ENSMUST00000092971 Gm21190A0A0G2JGJ6 266 aa18.26■□□□□ 0.51
Chd3-201ENSMUST00000092971 Rnf20Q5DTM8 973 aa18.26■□□□□ 0.51
Chd3-201ENSMUST00000092971 Chmp7Q8R1T1 451 aa18.25■□□□□ 0.51
Chd3-201ENSMUST00000092971 Cep89Q9CZX2 791 aa18.25■□□□□ 0.51
Chd3-201ENSMUST00000092971 Secisbp2lQ6A098 1086 aaKnown RBP18.25■□□□□ 0.51
Chd3-201ENSMUST00000092971 Necab1Q8BG18 352 aa18.25■□□□□ 0.51
Chd3-201ENSMUST00000092971 Ric3Q8BPM6 367 aa18.25■□□□□ 0.51
Chd3-201ENSMUST00000092971 Usp16Q99LG0 825 aa18.25■□□□□ 0.51
Chd3-201ENSMUST00000092971 Ccdc88bQ4QRL3 1481 aa18.24■□□□□ 0.51
Chd3-201ENSMUST00000092971 Kif7B7ZNG0 1348 aa18.24■□□□□ 0.51
Chd3-201ENSMUST00000092971 Rad54l2Q99NG0 1466 aa18.24■□□□□ 0.51
Chd3-201ENSMUST00000092971 Rbm25B2RY56 838 aaKnown RBP18.24■□□□□ 0.51
Chd3-201ENSMUST00000092971 Pank1Q8K4K6 548 aa18.24■□□□□ 0.51
Chd3-201ENSMUST00000092971 Frmd3Q8BHD4 595 aa18.23■□□□□ 0.51
Chd3-201ENSMUST00000092971 Hmgn5Q9JL35 406 aa18.23■□□□□ 0.51
Chd3-201ENSMUST00000092971 Bcl11bQ99PV8 884 aa18.23■□□□□ 0.51
Chd3-201ENSMUST00000092971 Shq1Q7TMX5 569 aa18.23■□□□□ 0.51
Chd3-201ENSMUST00000092971 Cfdp1O88271 295 aaKnown RBP18.22■□□□□ 0.51
Chd3-201ENSMUST00000092971 Nek4Q9Z1J2 792 aa18.22■□□□□ 0.51
Chd3-201ENSMUST00000092971 Trim30cD3YVI9 513 aa18.21■□□□□ 0.51
Chd3-201ENSMUST00000092971 Rbm28Q8CGC6 750 aaKnown RBP18.21■□□□□ 0.51
Chd3-201ENSMUST00000092971 SrrtQ99MR6 875 aaKnown RBP18.21■□□□□ 0.51
Chd3-201ENSMUST00000092971 Cep162Q6ZQ06 1403 aa18.21■□□□□ 0.51
Chd3-201ENSMUST00000092971 Rabep1O35551 862 aa18.2■□□□□ 0.5
Chd3-201ENSMUST00000092971 Usp40Q8BWR4 1235 aa18.2■□□□□ 0.5
Chd3-201ENSMUST00000092971 Baz1bQ9Z277 1479 aa18.19■□□□□ 0.5
Chd3-201ENSMUST00000092971 NaspQ99MD9 773 aaKnown RBP18.19■□□□□ 0.5
Chd3-201ENSMUST00000092971 Mns1Q61884 491 aa18.19■□□□□ 0.5
Chd3-201ENSMUST00000092971 NefhP19246 1090 aa18.18■□□□□ 0.5
Chd3-201ENSMUST00000092971 Smg6P61406 1418 aaKnown RBP18.18■□□□□ 0.5
Chd3-201ENSMUST00000092971 Cfap99A0A140LIX9 648 aa18.18■□□□□ 0.5
Chd3-201ENSMUST00000092971 Trim29Q8R2Q0 587 aa18.18■□□□□ 0.5
Chd3-201ENSMUST00000092971 Ercc6F8VPZ5 1481 aa18.18■□□□□ 0.5
Chd3-201ENSMUST00000092971 Dctn1O08788 1281 aa18.18■□□□□ 0.5
Chd3-201ENSMUST00000092971 Chaf1aQ9QWF0 911 aa18.17■□□□□ 0.5
Chd3-201ENSMUST00000092971 CenphQ9QYM8 241 aa18.16■□□□□ 0.5
Chd3-201ENSMUST00000092971 Arhgap35Q91YM2 1499 aa18.16■□□□□ 0.5
Chd3-201ENSMUST00000092971 Rock1P70335 1354 aa18.15■□□□□ 0.5
Chd3-201ENSMUST00000092971 Fyco1Q8VDC1 1437 aa18.15■□□□□ 0.5
Chd3-201ENSMUST00000092971 Ppp4r3bQ922R5 820 aa18.15■□□□□ 0.5
Chd3-201ENSMUST00000092971 Ubxn4Q8VCH8 506 aa18.14■□□□□ 0.5
Chd3-201ENSMUST00000092971 SelenooQ9DBC0 667 aa18.14■□□□□ 0.5
Chd3-201ENSMUST00000092971 PhaxQ9JJT9 385 aaKnown RBP18.14■□□□□ 0.5
Chd3-201ENSMUST00000092971 Cwc15Q9JHS9 229 aaKnown RBP18.14■□□□□ 0.49
Chd3-201ENSMUST00000092971 Mphosph10Q810V0 681 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 73.1 ms