RNA–Protein interactions for RNA: ENSMUST00000078886.9

Spen-201, Transcript of Msx2-interacting protein, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Spen, Length 12,082 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Spen-201ENSMUST00000078886 Plagl1Q9JLQ4 704 aa9.88□□□□□ -0.83
Spen-201ENSMUST00000078886 Pibf1E9Q6K3 756 aa9.88□□□□□ -0.83
Spen-201ENSMUST00000078886 Cdkn1cP49919 348 aa9.88□□□□□ -0.83
Spen-201ENSMUST00000078886 Map3k7clP58500 142 aa9.88□□□□□ -0.83
Spen-201ENSMUST00000078886 Rnf214Q8BFU3 668 aaKnown RBP9.88□□□□□ -0.83
Spen-201ENSMUST00000078886 OptnQ8K3K8 584 aa9.87□□□□□ -0.83
Spen-201ENSMUST00000078886 Fnbp4Q6ZQ03 1031 aa9.87□□□□□ -0.83
Spen-201ENSMUST00000078886 Cabp1Q9JLK7 227 aa9.87□□□□□ -0.83
Spen-201ENSMUST00000078886 Kif16bB1AVY7 1312 aa9.87□□□□□ -0.83
Spen-201ENSMUST00000078886 Tmco3Q8BH01 678 aa9.87□□□□□ -0.83
Spen-201ENSMUST00000078886 AampJ3QN89 436 aa9.86□□□□□ -0.83
Spen-201ENSMUST00000078886 Slc4a10Q5DTL9 1118 aa9.86□□□□□ -0.83
Spen-201ENSMUST00000078886 Cep162Q6ZQ06 1403 aa9.85□□□□□ -0.83
Spen-201ENSMUST00000078886 Trim58Q5NCC9 485 aa9.85□□□□□ -0.83
Spen-201ENSMUST00000078886 Cplx2P84086 134 aa9.85□□□□□ -0.83
Spen-201ENSMUST00000078886 Znf692Q3U381 531 aa9.85□□□□□ -0.83
Spen-201ENSMUST00000078886 Rock1P70335 1354 aa9.84□□□□□ -0.83
Spen-201ENSMUST00000078886 Arglu1Q3UL36 271 aaKnown RBP9.84□□□□□ -0.83
Spen-201ENSMUST00000078886 Evc2Q8K1G2 1220 aa9.84□□□□□ -0.83
Spen-201ENSMUST00000078886 Cep112Q5PR68 954 aa9.84□□□□□ -0.83
Spen-201ENSMUST00000078886 Pank3Q8R2W9 370 aa9.84□□□□□ -0.83
Spen-201ENSMUST00000078886 Tsen2Q6P7W5 460 aa9.84□□□□□ -0.83
Spen-201ENSMUST00000078886 Spata24Q6P926 205 aa9.84□□□□□ -0.83
Spen-201ENSMUST00000078886 Hnrnpul1Q8VDM6 859 aaKnown RBP9.84□□□□□ -0.83
Spen-201ENSMUST00000078886 NacadQ5SWP3 1504 aa9.84□□□□□ -0.83
Spen-201ENSMUST00000078886 Gpatch3Q8BIY1 525 aa9.84□□□□□ -0.83
Spen-201ENSMUST00000078886 ClasrpQ8CFC7 668 aa9.84□□□□□ -0.83
Spen-201ENSMUST00000078886 Hook1Q8BIL5 728 aa9.83□□□□□ -0.84
Spen-201ENSMUST00000078886 Atl3Q91YH5 541 aa9.83□□□□□ -0.84
Spen-201ENSMUST00000078886 Ccdc60Q8C4J0 545 aa9.83□□□□□ -0.84
Spen-201ENSMUST00000078886 Ccdc83Q9D4V3 305 aa9.83□□□□□ -0.84
Spen-201ENSMUST00000078886 MyclP10166 368 aa9.83□□□□□ -0.84
Spen-201ENSMUST00000078886 G3bp1P97855 465 aaKnown RBP9.83□□□□□ -0.84
Spen-201ENSMUST00000078886 Ccdc181Q80ZU5 509 aa9.83□□□□□ -0.84
Spen-201ENSMUST00000078886 Smc3Q9CW03 1217 aaKnown RBP9.83□□□□□ -0.84
Spen-201ENSMUST00000078886 Nup155Q99P88 1391 aaKnown RBP9.82□□□□□ -0.84
Spen-201ENSMUST00000078886 Vgll3P85442 326 aa9.82□□□□□ -0.84
Spen-201ENSMUST00000078886 Rnf187Q8BFX1 236 aa9.82□□□□□ -0.84
Spen-201ENSMUST00000078886 Znf704Q9ERQ3 566 aa9.82□□□□□ -0.84
Spen-201ENSMUST00000078886 Frmd3Q8BHD4 595 aa9.82□□□□□ -0.84
Spen-201ENSMUST00000078886 Tmx4Q8C0L0 335 aa9.82□□□□□ -0.84
Spen-201ENSMUST00000078886 Cplx1P63040 134 aa9.82□□□□□ -0.84
Spen-201ENSMUST00000078886 Prkrip1Q9CWV6 186 aaKnown RBP9.82□□□□□ -0.84
Spen-201ENSMUST00000078886 Gm42641I6L9G2 585 aa9.82□□□□□ -0.84
Spen-201ENSMUST00000078886 AtripQ8BMG1 785 aa9.82□□□□□ -0.84
Spen-201ENSMUST00000078886 FosbP13346 338 aa9.81□□□□□ -0.84
Spen-201ENSMUST00000078886 Phactr2B1AVP0 632 aa9.81□□□□□ -0.84
Spen-201ENSMUST00000078886 CastP51125 788 aa9.81□□□□□ -0.84
Spen-201ENSMUST00000078886 Sparcl1P70663 650 aa9.81□□□□□ -0.84
Spen-201ENSMUST00000078886 Stk31Q99MW1 1018 aa9.81□□□□□ -0.84
Spen-201ENSMUST00000078886 Rnf20Q5DTM8 973 aa9.81□□□□□ -0.84
Spen-201ENSMUST00000078886 Paxip1Q6NZQ4 1056 aa9.81□□□□□ -0.84
Spen-201ENSMUST00000078886 Erlin2Q8BFZ9 340 aa9.8□□□□□ -0.84
Spen-201ENSMUST00000078886 CenphQ9QYM8 241 aa9.8□□□□□ -0.84
Spen-201ENSMUST00000078886 Ubxn4Q8VCH8 506 aa9.8□□□□□ -0.84
Spen-201ENSMUST00000078886 ItpripQ3TNL8 555 aa9.8□□□□□ -0.84
Spen-201ENSMUST00000078886 KarsQ99MN1 595 aaKnown RBP9.8□□□□□ -0.84
Spen-201ENSMUST00000078886 CenpjQ569L8 1344 aa9.8□□□□□ -0.84
Spen-201ENSMUST00000078886 March6Q6ZQ89 909 aa9.79□□□□□ -0.84
Spen-201ENSMUST00000078886 Tceal9Q9DD24 104 aa9.79□□□□□ -0.84
Spen-201ENSMUST00000078886 Phf14Q9D4H9 881 aa9.79□□□□□ -0.84
Spen-201ENSMUST00000078886 Ddx11Q6AXC6 880 aa9.79□□□□□ -0.84
Spen-201ENSMUST00000078886 PogkQ80TC5 607 aa9.79□□□□□ -0.84
Spen-201ENSMUST00000078886 Cetn4Q8K4K1 168 aa9.79□□□□□ -0.84
Spen-201ENSMUST00000078886 Ccdc102aQ3TMW1 549 aa9.79□□□□□ -0.84
Spen-201ENSMUST00000078886 Mad1l1Q9WTX8 717 aaKnown RBP9.79□□□□□ -0.84
Spen-201ENSMUST00000078886 Inpp5dQ9ES52 1191 aa9.79□□□□□ -0.84
Spen-201ENSMUST00000078886 PdiltQ9DAN1 588 aa9.78□□□□□ -0.84
Spen-201ENSMUST00000078886 Sept6Q9R1T4 434 aa9.78□□□□□ -0.84
Spen-201ENSMUST00000078886 Anapc15-psA0A140T8L6 141 aa9.78□□□□□ -0.84
Spen-201ENSMUST00000078886 Gprasp1Q5U4C1 1347 aa9.78□□□□□ -0.84
Spen-201ENSMUST00000078886 Pdia4P08003 638 aaKnown RBP9.78□□□□□ -0.84
Spen-201ENSMUST00000078886 Ttll13A4Q9F6 804 aa9.78□□□□□ -0.84
Spen-201ENSMUST00000078886 Kif7B7ZNG0 1348 aa9.78□□□□□ -0.84
Spen-201ENSMUST00000078886 NefhP19246 1090 aa9.78□□□□□ -0.84
Spen-201ENSMUST00000078886 Psme1P97371 249 aa9.78□□□□□ -0.84
Spen-201ENSMUST00000078886 Plcd3Q8K2J0 785 aa9.78□□□□□ -0.84
Spen-201ENSMUST00000078886 Ercc6F8VPZ5 1481 aa9.78□□□□□ -0.84
Spen-201ENSMUST00000078886 Sox12Q04890 314 aa9.77□□□□□ -0.84
Spen-201ENSMUST00000078886 Nol12Q8BG17 217 aa9.77□□□□□ -0.85
Spen-201ENSMUST00000078886 PhaxQ9JJT9 385 aaKnown RBP9.77□□□□□ -0.85
Spen-201ENSMUST00000078886 Usp47Q8BY87 1376 aa9.77□□□□□ -0.85
Spen-201ENSMUST00000078886 Ccdc88bQ4QRL3 1481 aa9.77□□□□□ -0.85
Spen-201ENSMUST00000078886 Pmfbp1Q9WVQ0 1022 aa9.77□□□□□ -0.85
Spen-201ENSMUST00000078886 Ccdc183A2AJB1 534 aa9.77□□□□□ -0.85
Spen-201ENSMUST00000078886 Cc2d1aQ8K1A6 943 aa9.77□□□□□ -0.85
Spen-201ENSMUST00000078886 Zhx1P70121 873 aa9.77□□□□□ -0.85
Spen-201ENSMUST00000078886 Q9D2X8 372 aa9.77□□□□□ -0.85
Spen-201ENSMUST00000078886 Fez1Q8K0X8 392 aa9.76□□□□□ -0.85
Spen-201ENSMUST00000078886 Map9Q3TRR0 646 aa9.76□□□□□ -0.85
Spen-201ENSMUST00000078886 GsdmaQ9EST1 446 aa9.76□□□□□ -0.85
Spen-201ENSMUST00000078886 Commd10Q8JZY2 202 aa9.76□□□□□ -0.85
Spen-201ENSMUST00000078886 Dydc1Q9D9T0 175 aa9.76□□□□□ -0.85
Spen-201ENSMUST00000078886 Esx1O88933 382 aa9.76□□□□□ -0.85
Spen-201ENSMUST00000078886 Nop14Q8R3N1 860 aaKnown RBP9.76□□□□□ -0.85
Spen-201ENSMUST00000078886 Cbx1P83917 185 aaKnown RBP9.76□□□□□ -0.85
Spen-201ENSMUST00000078886 Ccdc191J3QQ27 883 aa9.75□□□□□ -0.85
Spen-201ENSMUST00000078886 Chmp4cQ9D7F7 232 aa9.75□□□□□ -0.85
Spen-201ENSMUST00000078886 Fmnl2A2APV2 1086 aa9.75□□□□□ -0.85
Spen-201ENSMUST00000078886 PdcQ9QW08 244 aa9.75□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms