RNA–Protein interactions for RNA: ENSMUST00000046207.8

Sf3b6-201, Transcript of Splicing factor 3B subunit 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b6, Length 1,180 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6-201ENSMUST00000046207 Nyap1Q6PFX7 833 aa23.63■■□□□ 1.37
Sf3b6-201ENSMUST00000046207 Arap3Q8R5G7 1538 aa23.63■■□□□ 1.37
Sf3b6-201ENSMUST00000046207 Slit2Q9R1B9 1521 aa23.63■■□□□ 1.37
Sf3b6-201ENSMUST00000046207 Rfx7F8VPJ6 1459 aa23.62■■□□□ 1.37
Sf3b6-201ENSMUST00000046207 Psme1P97371 249 aa23.62■■□□□ 1.37
Sf3b6-201ENSMUST00000046207 Cypt2Q6P924 180 aa23.62■■□□□ 1.37
Sf3b6-201ENSMUST00000046207 Nup155Q99P88 1391 aaKnown RBP23.62■■□□□ 1.37
Sf3b6-201ENSMUST00000046207 Uggt1Q6P5E4 1551 aa23.61■■□□□ 1.37
Sf3b6-201ENSMUST00000046207 Kif21bQ9QXL1 1668 aa23.61■■□□□ 1.37
Sf3b6-201ENSMUST00000046207 Ankrd36D3Z4K0 1415 aa23.61■■□□□ 1.37
Sf3b6-201ENSMUST00000046207 Gm13695A2AK44 830 aa23.61■■□□□ 1.37
Sf3b6-201ENSMUST00000046207 Gimap5Q8BWF2 308 aa23.61■■□□□ 1.37
Sf3b6-201ENSMUST00000046207 Ehbp1l1Q99MS7 1716 aa23.61■■□□□ 1.37
Sf3b6-201ENSMUST00000046207 P3h3Q8CG70 732 aa23.6■■□□□ 1.37
Sf3b6-201ENSMUST00000046207 Nsd2Q8BVE8 1365 aa23.6■■□□□ 1.37
Sf3b6-201ENSMUST00000046207 Atp7aQ64430 1491 aa23.59■■□□□ 1.37
Sf3b6-201ENSMUST00000046207 Tarbp1E9Q368 1579 aa23.59■■□□□ 1.37
Sf3b6-201ENSMUST00000046207 Iqgap3F8VQ29 1632 aa23.57■■□□□ 1.36
Sf3b6-201ENSMUST00000046207 Zfp644E9QA22 1323 aa23.56■■□□□ 1.36
Sf3b6-201ENSMUST00000046207 Prrc2bQ7TPM1 1486 aaKnown RBP23.55■■□□□ 1.36
Sf3b6-201ENSMUST00000046207 Tns3Q5SSZ5 1440 aa23.53■■□□□ 1.36
Sf3b6-201ENSMUST00000046207 Slit3Q9WVB4 1523 aa23.51■■□□□ 1.35
Sf3b6-201ENSMUST00000046207 Slain2Q8CI08 581 aa23.51■■□□□ 1.35
Sf3b6-201ENSMUST00000046207 Cd109Q8R422 1442 aa23.5■■□□□ 1.35
Sf3b6-201ENSMUST00000046207 Fnbp4Q6ZQ03 1031 aa23.49■■□□□ 1.35
Sf3b6-201ENSMUST00000046207 Fam50aQ9WV03 339 aaKnown RBP23.49■■□□□ 1.35
Sf3b6-201ENSMUST00000046207 Mroh1E0CZ22 1640 aa23.48■■□□□ 1.35
Sf3b6-201ENSMUST00000046207 Evi5lH3BKQ3 813 aa23.48■■□□□ 1.35
Sf3b6-201ENSMUST00000046207 Slc5a4bQ91ZP4 660 aa23.48■■□□□ 1.35
Sf3b6-201ENSMUST00000046207 Asxl2Q8BZ32 1370 aa23.48■■□□□ 1.35
Sf3b6-201ENSMUST00000046207 Arhgef28P97433 1693 aa23.48■■□□□ 1.35
Sf3b6-201ENSMUST00000046207 Ttll13A4Q9F6 804 aa23.47■■□□□ 1.35
Sf3b6-201ENSMUST00000046207 Adgrl1Q80TR1 1466 aa23.46■■□□□ 1.35
Sf3b6-201ENSMUST00000046207 Ttll5Q8CHB8 1328 aa23.45■■□□□ 1.34
Sf3b6-201ENSMUST00000046207 Erich6D3Z6S9 713 aa23.45■■□□□ 1.34
Sf3b6-201ENSMUST00000046207 Stk24Q99KH8 431 aa23.45■■□□□ 1.34
Sf3b6-201ENSMUST00000046207 PtprgQ05909 1442 aa23.42■■□□□ 1.34
Sf3b6-201ENSMUST00000046207 Qtrt2B8ZXI1 415 aa23.41■■□□□ 1.34
Sf3b6-201ENSMUST00000046207 Nhsl1Q8CAF4 1587 aa23.4■■□□□ 1.34
Sf3b6-201ENSMUST00000046207 Sema6bO54951 886 aa23.39■■□□□ 1.33
Sf3b6-201ENSMUST00000046207 Abca8aQ8K442 1620 aa23.39■■□□□ 1.33
Sf3b6-201ENSMUST00000046207 Unc13bQ9Z1N9 1602 aa23.38■■□□□ 1.33
Sf3b6-201ENSMUST00000046207 Cntnap1O54991 1385 aa23.38■■□□□ 1.33
Sf3b6-201ENSMUST00000046207 NinlQ6ZQ12 1394 aa23.38■■□□□ 1.33
Sf3b6-201ENSMUST00000046207 PtprvP70289 1705 aa23.36■■□□□ 1.33
Sf3b6-201ENSMUST00000046207 Nwd1A6H603 1563 aa23.35■■□□□ 1.33
Sf3b6-201ENSMUST00000046207 Pik3c2gO70167 1506 aa23.34■■□□□ 1.33
Sf3b6-201ENSMUST00000046207 Sall3Q62255 1320 aa23.33■■□□□ 1.33
Sf3b6-201ENSMUST00000046207 ErbinQ80TH2 1402 aa23.33■■□□□ 1.33
Sf3b6-201ENSMUST00000046207 Pik3r4Q8VD65 1358 aa23.32■■□□□ 1.32
Sf3b6-201ENSMUST00000046207 Trak1Q6PD31 939 aa23.32■■□□□ 1.32
Sf3b6-201ENSMUST00000046207 Edc4Q3UJB9 1406 aaKnown RBP23.32■■□□□ 1.32
Sf3b6-201ENSMUST00000046207 Siglec1Q62230 1695 aa23.32■■□□□ 1.32
Sf3b6-201ENSMUST00000046207 AatkQ80YE4 1365 aa23.31■■□□□ 1.32
Sf3b6-201ENSMUST00000046207 Dapk1Q80YE7 1442 aa23.31■■□□□ 1.32
Sf3b6-201ENSMUST00000046207 Rprd2Q6NXI6 1469 aaKnown RBP23.3■■□□□ 1.32
Sf3b6-201ENSMUST00000046207 Atf3Q60765 181 aa23.29■■□□□ 1.32
Sf3b6-201ENSMUST00000046207 Zfp142G5E869 1843 aa23.28■■□□□ 1.32
Sf3b6-201ENSMUST00000046207 Tmem94Q7TSH8 1360 aa23.27■■□□□ 1.32
Sf3b6-201ENSMUST00000046207 Col14a1Q80X19 1797 aa23.27■■□□□ 1.32
Sf3b6-201ENSMUST00000046207 MypopQ8R4U1 393 aa23.25■■□□□ 1.31
Sf3b6-201ENSMUST00000046207 AU022751B1B0V2 589 aa23.24■■□□□ 1.31
Sf3b6-201ENSMUST00000046207 Lrp6O88572 1613 aa23.23■■□□□ 1.31
Sf3b6-201ENSMUST00000046207 Myom1Q62234 1667 aaKnown RBP23.23■■□□□ 1.31
Sf3b6-201ENSMUST00000046207 Znf526Q8BI66 675 aa23.23■■□□□ 1.31
Sf3b6-201ENSMUST00000046207 Q9D9H8 365 aa23.23■■□□□ 1.31
Sf3b6-201ENSMUST00000046207 Zranb1Q7M760 708 aa23.22■■□□□ 1.31
Sf3b6-201ENSMUST00000046207 KdrP35918 1367 aa23.22■■□□□ 1.31
Sf3b6-201ENSMUST00000046207 Ybx3Q9JKB3 361 aaKnown RBP23.21■■□□□ 1.31
Sf3b6-201ENSMUST00000046207 Mia2Q91ZV0 1396 aa23.21■■□□□ 1.31
Sf3b6-201ENSMUST00000046207 NalcnQ8BXR5 1738 aa23.2■■□□□ 1.3
Sf3b6-201ENSMUST00000046207 Atp1b4Q99ME6 356 aa23.2■■□□□ 1.3
Sf3b6-201ENSMUST00000046207 HnrnpmQ9D0E1 729 aaKnown RBP23.2■■□□□ 1.3
Sf3b6-201ENSMUST00000046207 Bcl2l12Q9D3J3 255 aa23.2■■□□□ 1.3
Sf3b6-201ENSMUST00000046207 Dhx9O70133 1380 aaKnown RBP23.19■■□□□ 1.3
Sf3b6-201ENSMUST00000046207 Ube2uB1AUC4 352 aa23.18■■□□□ 1.3
Sf3b6-201ENSMUST00000046207 UbtfP25976 765 aaKnown RBP23.17■■□□□ 1.3
Sf3b6-201ENSMUST00000046207 Dmrt2Q8BG36 561 aa23.16■■□□□ 1.3
Sf3b6-201ENSMUST00000046207 Shq1Q7TMX5 569 aa23.15■■□□□ 1.3
Sf3b6-201ENSMUST00000046207 Ift172Q6VH22 1749 aa23.14■■□□□ 1.3
Sf3b6-201ENSMUST00000046207 C3P01027 1663 aa23.13■■□□□ 1.29
Sf3b6-201ENSMUST00000046207 Kif24Q6NWW5 1356 aa23.13■■□□□ 1.29
Sf3b6-201ENSMUST00000046207 Plxnc1Q9QZC2 1574 aa23.12■■□□□ 1.29
Sf3b6-201ENSMUST00000046207 Cps1Q8C196 1500 aa23.1■■□□□ 1.29
Sf3b6-201ENSMUST00000046207 Ggt6Q6PDE7 497 aa23.1■■□□□ 1.29
Sf3b6-201ENSMUST00000046207 MaddQ80U28 1577 aa23.1■■□□□ 1.29
Sf3b6-201ENSMUST00000046207 Abcc10Q8R4P9 1501 aa23.09■■□□□ 1.29
Sf3b6-201ENSMUST00000046207 DccP70211 1447 aa23.08■■□□□ 1.29
Sf3b6-201ENSMUST00000046207 Itsn2Q9Z0R6 1659 aa23.08■■□□□ 1.29
Sf3b6-201ENSMUST00000046207 Rreb1Q3UH06 1700 aaKnown RBP23.05■■□□□ 1.28
Sf3b6-201ENSMUST00000046207 Marf1Q8BJ34 1730 aaKnown RBP23.05■■□□□ 1.28
Sf3b6-201ENSMUST00000046207 Pik3c2bE9QAN8 1632 aa23.04■■□□□ 1.28
Sf3b6-201ENSMUST00000046207 Kif20bQ80WE4 1774 aaKnown RBP23.04■■□□□ 1.28
Sf3b6-201ENSMUST00000046207 Sipa1l2Q80TE4 1722 aa23.02■■□□□ 1.28
Sf3b6-201ENSMUST00000046207 Wnk3Q80XP9 1757 aa23.01■■□□□ 1.27
Sf3b6-201ENSMUST00000046207 Ddx17Q501J6 650 aaKnown RBP23■■□□□ 1.27
Sf3b6-201ENSMUST00000046207 Rgs17Q9QZB0 210 aa23■■□□□ 1.27
Sf3b6-201ENSMUST00000046207 Ildr2B5TVM2 661 aa22.99■■□□□ 1.27
Sf3b6-201ENSMUST00000046207 Mphosph9A6H5Y1 991 aa22.98■■□□□ 1.27
Sf3b6-201ENSMUST00000046207 Hdac5Q9Z2V6 1113 aa22.98■■□□□ 1.27
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms