RNA–Protein interactions for RNA: ENSMUST00000040783.10

Usp40-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp40, Length 5,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-201ENSMUST00000040783 Smc4Q8CG47 1286 aa9.35□□□□□ -0.91
Usp40-201ENSMUST00000040783 PnisrA2AJT4 805 aaKnown RBP9.35□□□□□ -0.91
Usp40-201ENSMUST00000040783 Rrp9Q91WM3 475 aaKnown RBP9.34□□□□□ -0.91
Usp40-201ENSMUST00000040783 Evi5lH3BKQ3 813 aa9.34□□□□□ -0.91
Usp40-201ENSMUST00000040783 Neo1P97798 1493 aa9.34□□□□□ -0.91
Usp40-201ENSMUST00000040783 Cluap1Q8R3P7 413 aa9.34□□□□□ -0.91
Usp40-201ENSMUST00000040783 TchhA0A0B4J1F9 1599 aa9.34□□□□□ -0.91
Usp40-201ENSMUST00000040783 PtprkP35822 1457 aa9.34□□□□□ -0.91
Usp40-201ENSMUST00000040783 Rock1P70335 1354 aa9.34□□□□□ -0.91
Usp40-201ENSMUST00000040783 Ttll5Q8CHB8 1328 aa9.34□□□□□ -0.91
Usp40-201ENSMUST00000040783 A2mQ6GQT1 1474 aa9.33□□□□□ -0.92
Usp40-201ENSMUST00000040783 BbxQ8VBW5 907 aa9.33□□□□□ -0.92
Usp40-201ENSMUST00000040783 Il16O54824 1322 aa9.33□□□□□ -0.92
Usp40-201ENSMUST00000040783 Zpr1Q62384 459 aa9.33□□□□□ -0.92
Usp40-201ENSMUST00000040783 Lamc3Q9R0B6 1581 aa9.32□□□□□ -0.92
Usp40-201ENSMUST00000040783 Casc1Q6TDU8 730 aa9.32□□□□□ -0.92
Usp40-201ENSMUST00000040783 Ncapd3Q6ZQK0 1506 aa9.32□□□□□ -0.92
Usp40-201ENSMUST00000040783 Ccdc60Q8C4J0 545 aa9.32□□□□□ -0.92
Usp40-201ENSMUST00000040783 EspnQ9ET47 871 aa9.32□□□□□ -0.92
Usp40-201ENSMUST00000040783 Sf3b2Q3UJB0 878 aaKnown RBP9.31□□□□□ -0.92
Usp40-201ENSMUST00000040783 Tcerg1Q8CGF7 1100 aaKnown RBP9.31□□□□□ -0.92
Usp40-201ENSMUST00000040783 Fbxo3Q9DC63 480 aa9.31□□□□□ -0.92
Usp40-201ENSMUST00000040783 Anapc15P60007 132 aa9.31□□□□□ -0.92
Usp40-201ENSMUST00000040783 Brpf1B2RRD7 1212 aa9.31□□□□□ -0.92
Usp40-201ENSMUST00000040783 MsnP26041 577 aaKnown RBP9.31□□□□□ -0.92
Usp40-201ENSMUST00000040783 Ralbp1Q62172 648 aa9.3□□□□□ -0.92
Usp40-201ENSMUST00000040783 Iffo2Q8R2V2 512 aa9.3□□□□□ -0.92
Usp40-201ENSMUST00000040783 Arap1Q4LDD4 1452 aa9.3□□□□□ -0.92
Usp40-201ENSMUST00000040783 Slc4a10Q5DTL9 1118 aa9.3□□□□□ -0.92
Usp40-201ENSMUST00000040783 Grin2aP35436 1464 aa9.3□□□□□ -0.92
Usp40-201ENSMUST00000040783 SynmQ70IV5 1561 aa9.3□□□□□ -0.92
Usp40-201ENSMUST00000040783 Magi1Q6RHR9 1471 aa9.3□□□□□ -0.92
Usp40-201ENSMUST00000040783 Smg6P61406 1418 aaKnown RBP9.29□□□□□ -0.92
Usp40-201ENSMUST00000040783 G3bp1P97855 465 aaKnown RBP9.29□□□□□ -0.92
Usp40-201ENSMUST00000040783 Ipo9Q91YE6 1041 aa9.29□□□□□ -0.92
Usp40-201ENSMUST00000040783 Gimap6Q8K349 305 aa9.29□□□□□ -0.92
Usp40-201ENSMUST00000040783 Gtf2a1Q99PM3 378 aa9.29□□□□□ -0.92
Usp40-201ENSMUST00000040783 Arid4aF8VPQ2 1261 aaKnown RBP9.29□□□□□ -0.92
Usp40-201ENSMUST00000040783 Gm10471E9Q1C7 252 aa9.28□□□□□ -0.92
Usp40-201ENSMUST00000040783 Slc4a3P16283 1227 aa9.28□□□□□ -0.92
Usp40-201ENSMUST00000040783 Cgnl1Q6AW69 1298 aa9.28□□□□□ -0.92
Usp40-201ENSMUST00000040783 Chrna2Q91X60 512 aa9.28□□□□□ -0.92
Usp40-201ENSMUST00000040783 Fmnl2A2APV2 1086 aa9.28□□□□□ -0.92
Usp40-201ENSMUST00000040783 AppP12023 770 aa9.28□□□□□ -0.92
Usp40-201ENSMUST00000040783 Fbln2P37889 1221 aa9.28□□□□□ -0.92
Usp40-201ENSMUST00000040783 Rbm10Q99KG3 930 aaKnown RBP9.28□□□□□ -0.92
Usp40-201ENSMUST00000040783 AqrQ8CFQ3 1481 aaKnown RBP9.28□□□□□ -0.92
Usp40-201ENSMUST00000040783 Ddx54Q8K4L0 874 aaKnown RBP9.27□□□□□ -0.92
Usp40-201ENSMUST00000040783 Mug1P28665 1476 aa9.27□□□□□ -0.93
Usp40-201ENSMUST00000040783 Zranb3Q6NZP1 1069 aa9.27□□□□□ -0.93
Usp40-201ENSMUST00000040783 Adam1bQ8R534 806 aa9.27□□□□□ -0.93
Usp40-201ENSMUST00000040783 Myom3A2ABU4 1439 aa9.27□□□□□ -0.93
Usp40-201ENSMUST00000040783 Gnai1B2RSH2 354 aa9.26□□□□□ -0.93
Usp40-201ENSMUST00000040783 Gnai3Q9DC51 354 aa9.26□□□□□ -0.93
Usp40-201ENSMUST00000040783 Kcnn1Q9EQR3 537 aa9.26□□□□□ -0.93
Usp40-201ENSMUST00000040783 Gnl3lQ6PGG6 577 aaKnown RBP9.26□□□□□ -0.93
Usp40-201ENSMUST00000040783 Esx1O88933 382 aa9.25□□□□□ -0.93
Usp40-201ENSMUST00000040783 Slc52a2Q9D8F3 450 aa9.25□□□□□ -0.93
Usp40-201ENSMUST00000040783 Swt1Q9DBQ9 907 aa9.25□□□□□ -0.93
Usp40-201ENSMUST00000040783 Ddrgk1Q80WW9 315 aa9.25□□□□□ -0.93
Usp40-201ENSMUST00000040783 Gm21698A0A087WQP8 267 aa9.25□□□□□ -0.93
Usp40-201ENSMUST00000040783 Gm21671G3UY31 267 aa9.25□□□□□ -0.93
Usp40-201ENSMUST00000040783 Usp16Q99LG0 825 aa9.25□□□□□ -0.93
Usp40-201ENSMUST00000040783 HypkQ9CR41 129 aa9.25□□□□□ -0.93
Usp40-201ENSMUST00000040783 HnrnpmQ9D0E1 729 aaKnown RBP9.25□□□□□ -0.93
Usp40-201ENSMUST00000040783 Tceal9Q9DD24 104 aa9.25□□□□□ -0.93
Usp40-201ENSMUST00000040783 Sparcl1P70663 650 aa9.24□□□□□ -0.93
Usp40-201ENSMUST00000040783 Cdk19Q8BWD8 501 aa9.24□□□□□ -0.93
Usp40-201ENSMUST00000040783 Top2bQ64511 1612 aa9.24□□□□□ -0.93
Usp40-201ENSMUST00000040783 Smarce1O54941 411 aaKnown RBP9.24□□□□□ -0.93
Usp40-201ENSMUST00000040783 DmtnQ9WV69 405 aa9.24□□□□□ -0.93
Usp40-201ENSMUST00000040783 Tiam1Q60610 1591 aa9.24□□□□□ -0.93
Usp40-201ENSMUST00000040783 OvosQ3UU35 1456 aa9.24□□□□□ -0.93
Usp40-201ENSMUST00000040783 Plekhd1B2RPU2 505 aa9.24□□□□□ -0.93
Usp40-201ENSMUST00000040783 ZgpatQ8VDM1 511 aa9.24□□□□□ -0.93
Usp40-201ENSMUST00000040783 Mfap1aC0HKD8 439 aaKnown RBP9.23□□□□□ -0.93
Usp40-201ENSMUST00000040783 Mfap1bC0HKD9 439 aaKnown RBP9.23□□□□□ -0.93
Usp40-201ENSMUST00000040783 Ccdc146E9Q9F7 977 aa9.23□□□□□ -0.93
Usp40-201ENSMUST00000040783 Atp10dQ8K2X1 1416 aa9.23□□□□□ -0.93
Usp40-201ENSMUST00000040783 Dennd6aQ8BH65 605 aa9.23□□□□□ -0.93
Usp40-201ENSMUST00000040783 Eva1cP58659 440 aa9.23□□□□□ -0.93
Usp40-201ENSMUST00000040783 Gm156Q58A37 223 aa9.22□□□□□ -0.93
Usp40-201ENSMUST00000040783 Ipo8Q7TMY7 1010 aa9.22□□□□□ -0.93
Usp40-201ENSMUST00000040783 R3hcc1Q8BSI6 488 aa9.22□□□□□ -0.93
Usp40-201ENSMUST00000040783 Ttc21bQ0HA38 1315 aa9.22□□□□□ -0.93
Usp40-201ENSMUST00000040783 Smg7Q5RJH6 1138 aaKnown RBP9.22□□□□□ -0.93
Usp40-201ENSMUST00000040783 NexnQ7TPW1 607 aa9.22□□□□□ -0.93
Usp40-201ENSMUST00000040783 Dhx9O70133 1380 aaKnown RBP9.22□□□□□ -0.93
Usp40-201ENSMUST00000040783 Ddx11Q6AXC6 880 aa9.22□□□□□ -0.93
Usp40-201ENSMUST00000040783 Cc2d1aQ8K1A6 943 aa9.22□□□□□ -0.93
Usp40-201ENSMUST00000040783 TkfcQ8VC30 578 aa9.22□□□□□ -0.93
Usp40-201ENSMUST00000040783 Ccdc47Q9D024 483 aaKnown RBP9.22□□□□□ -0.93
Usp40-201ENSMUST00000040783 Mlh3A0A1Y7VMP7 1443 aa9.21□□□□□ -0.93
Usp40-201ENSMUST00000040783 GorabQ8BRM2 368 aa9.21□□□□□ -0.93
Usp40-201ENSMUST00000040783 Caskin1Q6P9K8 1431 aa9.21□□□□□ -0.93
Usp40-201ENSMUST00000040783 NexmifQ5DTT1 1515 aa9.21□□□□□ -0.94
Usp40-201ENSMUST00000040783 Tpm3-rs7D3Z2H9 248 aa9.2□□□□□ -0.94
Usp40-201ENSMUST00000040783 CalrP14211 416 aaKnown RBP9.2□□□□□ -0.94
Usp40-201ENSMUST00000040783 Brd2Q7JJ13 798 aaKnown RBP9.2□□□□□ -0.94
Usp40-201ENSMUST00000040783 AampJ3QN89 436 aa9.2□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 63 ms