RNA–Protein interactions for RNA: ENSMUST00000032168.6

Sec61a1-201, Transcript of Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sec61a1, Length 3,172 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1-201ENSMUST00000032168 Srpk2O54781 681 aaKnown RBP22.71■■□□□ 1.23
Sec61a1-201ENSMUST00000032168 Tmf1B9EKI3 1091 aa22.71■■□□□ 1.23
Sec61a1-201ENSMUST00000032168 L3mbtl2P59178 703 aa22.71■■□□□ 1.23
Sec61a1-201ENSMUST00000032168 Ak9G3UYQ4 1894 aa22.71■■□□□ 1.23
Sec61a1-201ENSMUST00000032168 Zscan21Q07231 555 aa22.71■■□□□ 1.23
Sec61a1-201ENSMUST00000032168 Prdm10Q3UTQ7 1184 aa22.71■■□□□ 1.23
Sec61a1-201ENSMUST00000032168 Iqgap3F8VQ29 1632 aa22.7■■□□□ 1.22
Sec61a1-201ENSMUST00000032168 Tmem131lQ3U3D7 1597 aa22.7■■□□□ 1.22
Sec61a1-201ENSMUST00000032168 AatkQ80YE4 1365 aa22.7■■□□□ 1.22
Sec61a1-201ENSMUST00000032168 Rad21Q61550 635 aaKnown RBP22.69■■□□□ 1.22
Sec61a1-201ENSMUST00000032168 Usp40Q8BWR4 1235 aa22.69■■□□□ 1.22
Sec61a1-201ENSMUST00000032168 Gli2Q0VGT2 1544 aa22.69■■□□□ 1.22
Sec61a1-201ENSMUST00000032168 Gtf2e1Q9D0D5 440 aa22.66■■□□□ 1.22
Sec61a1-201ENSMUST00000032168 Myo3aQ8K3H5 1613 aa22.66■■□□□ 1.22
Sec61a1-201ENSMUST00000032168 Anp32aO35381 247 aa22.66■■□□□ 1.22
Sec61a1-201ENSMUST00000032168 Ppp4r2Q0VGB7 417 aa22.65■■□□□ 1.22
Sec61a1-201ENSMUST00000032168 Fam184bQ0KK56 942 aa22.64■■□□□ 1.21
Sec61a1-201ENSMUST00000032168 Topbp1Q6ZQF0 1515 aa22.63■■□□□ 1.21
Sec61a1-201ENSMUST00000032168 Depdc5P61460 1591 aa22.62■■□□□ 1.21
Sec61a1-201ENSMUST00000032168 Cnga1P29974 684 aa22.62■■□□□ 1.21
Sec61a1-201ENSMUST00000032168 Zfp444Q3TDV8 331 aaKnown RBP22.62■■□□□ 1.21
Sec61a1-201ENSMUST00000032168 Abca8aQ8K442 1620 aa22.61■■□□□ 1.21
Sec61a1-201ENSMUST00000032168 Kcnh8P59111 1102 aa22.6■■□□□ 1.21
Sec61a1-201ENSMUST00000032168 Mak16Q8BGS0 296 aaKnown RBP22.6■■□□□ 1.21
Sec61a1-201ENSMUST00000032168 Esx1O88933 382 aa22.59■■□□□ 1.21
Sec61a1-201ENSMUST00000032168 Atp10aO54827 1508 aa22.59■■□□□ 1.21
Sec61a1-201ENSMUST00000032168 Dip2cE9PWR4 1557 aa22.59■■□□□ 1.21
Sec61a1-201ENSMUST00000032168 Gm16486A0A1D5RMD1 1434 aa22.59■■□□□ 1.21
Sec61a1-201ENSMUST00000032168 Puf60Q3UEB3 564 aaKnown RBP22.58■■□□□ 1.21
Sec61a1-201ENSMUST00000032168 Plch2A2AP18 1501 aa22.58■■□□□ 1.21
Sec61a1-201ENSMUST00000032168 Ppp2r1aQ76MZ3 589 aa22.58■■□□□ 1.21
Sec61a1-201ENSMUST00000032168 Pola1P33609 1465 aa22.58■■□□□ 1.21
Sec61a1-201ENSMUST00000032168 Sbno1Q689Z5 1390 aa22.57■■□□□ 1.2
Sec61a1-201ENSMUST00000032168 Wdr43Q6ZQL4 677 aaKnown RBP22.57■■□□□ 1.2
Sec61a1-201ENSMUST00000032168 Yeats2Q3TUF7 1407 aa22.57■■□□□ 1.2
Sec61a1-201ENSMUST00000032168 Erbb3Q61526 1339 aa22.56■■□□□ 1.2
Sec61a1-201ENSMUST00000032168 AU022751B1B0V2 589 aa22.56■■□□□ 1.2
Sec61a1-201ENSMUST00000032168 Adgrb3Q80ZF8 1522 aa22.56■■□□□ 1.2
Sec61a1-201ENSMUST00000032168 Cep152A2AUM9 1736 aaKnown RBP22.56■■□□□ 1.2
Sec61a1-201ENSMUST00000032168 Rims1Q99NE5 1463 aa22.55■■□□□ 1.2
Sec61a1-201ENSMUST00000032168 Ehbp1l1Q99MS7 1716 aa22.54■■□□□ 1.2
Sec61a1-201ENSMUST00000032168 Cdk5rap2Q8K389 1822 aa22.54■■□□□ 1.2
Sec61a1-201ENSMUST00000032168 AglF8VPN4 1532 aa22.54■■□□□ 1.2
Sec61a1-201ENSMUST00000032168 RereQ80TZ9 1558 aa22.53■■□□□ 1.2
Sec61a1-201ENSMUST00000032168 Slc4a3P16283 1227 aa22.53■■□□□ 1.2
Sec61a1-201ENSMUST00000032168 Ppp1r18Q8BQ30 594 aa22.53■■□□□ 1.2
Sec61a1-201ENSMUST00000032168 Dcaf11Q91VU6 549 aa22.53■■□□□ 1.2
Sec61a1-201ENSMUST00000032168 Clasp1Q80TV8 1535 aaKnown RBP22.53■■□□□ 1.2
Sec61a1-201ENSMUST00000032168 Cfap65Q3V0B4 1847 aa22.53■■□□□ 1.2
Sec61a1-201ENSMUST00000032168 AdgbG3UZ78 1657 aa22.53■■□□□ 1.2
Sec61a1-201ENSMUST00000032168 Kif7B7ZNG0 1348 aa22.52■■□□□ 1.2
Sec61a1-201ENSMUST00000032168 Cdc42bpgQ80UW5 1551 aa22.51■■□□□ 1.19
Sec61a1-201ENSMUST00000032168 Zmym4A2A791 1549 aaKnown RBP22.5■■□□□ 1.19
Sec61a1-201ENSMUST00000032168 CrbnQ8C7D2 445 aa22.5■■□□□ 1.19
Sec61a1-201ENSMUST00000032168 Tex14Q7M6U3 1450 aa22.5■■□□□ 1.19
Sec61a1-201ENSMUST00000032168 Cul9Q80TT8 1865 aa22.5■■□□□ 1.19
Sec61a1-201ENSMUST00000032168 Itsn2Q9Z0R6 1659 aa22.5■■□□□ 1.19
Sec61a1-201ENSMUST00000032168 Stag3O70576 1240 aa22.5■■□□□ 1.19
Sec61a1-201ENSMUST00000032168 Prdm2A2A7B5 1709 aaKnown RBP22.49■■□□□ 1.19
Sec61a1-201ENSMUST00000032168 Adgrl3Q80TS3 1537 aa22.48■■□□□ 1.19
Sec61a1-201ENSMUST00000032168 Nphp4P59240 1425 aa22.48■■□□□ 1.19
Sec61a1-201ENSMUST00000032168 Rab3gap2Q8BMG7 1366 aa22.47■■□□□ 1.19
Sec61a1-201ENSMUST00000032168 Atp1b4Q99ME6 356 aa22.46■■□□□ 1.19
Sec61a1-201ENSMUST00000032168 Stk26Q99JT2 416 aa22.45■■□□□ 1.18
Sec61a1-201ENSMUST00000032168 Trpm1Q2TV84 1622 aa22.44■■□□□ 1.18
Sec61a1-201ENSMUST00000032168 Efcab6Q6P1E8 1516 aa22.44■■□□□ 1.18
Sec61a1-201ENSMUST00000032168 Stard8Q8K031 1019 aa22.44■■□□□ 1.18
Sec61a1-201ENSMUST00000032168 Nlrp6Q91WS2 869 aa22.43■■□□□ 1.18
Sec61a1-201ENSMUST00000032168 Myom2Q14BI5 1463 aa22.42■■□□□ 1.18
Sec61a1-201ENSMUST00000032168 Kank1E9Q238 1360 aa22.42■■□□□ 1.18
Sec61a1-201ENSMUST00000032168 Kdm5aQ3UXZ9 1690 aa22.41■■□□□ 1.18
Sec61a1-201ENSMUST00000032168 Ino80Q6ZPV2 1559 aa22.4■■□□□ 1.18
Sec61a1-201ENSMUST00000032168 Zranb1Q7M760 708 aa22.4■■□□□ 1.18
Sec61a1-201ENSMUST00000032168 Supt16hQ920B9 1047 aa22.4■■□□□ 1.18
Sec61a1-201ENSMUST00000032168 Knl1Q66JQ7 1612 aa22.39■■□□□ 1.18
Sec61a1-201ENSMUST00000032168 Tecpr2Q3UH45 1423 aa22.38■■□□□ 1.17
Sec61a1-201ENSMUST00000032168 Talpid3E9PV87 1520 aa22.38■■□□□ 1.17
Sec61a1-201ENSMUST00000032168 Afap1Q80YS6 731 aa22.38■■□□□ 1.17
Sec61a1-201ENSMUST00000032168 Kif16bB1AVY7 1312 aa22.37■■□□□ 1.17
Sec61a1-201ENSMUST00000032168 Akap12Q9WTQ5 1684 aa22.37■■□□□ 1.17
Sec61a1-201ENSMUST00000032168 Sipa1l1Q8C0T5 1782 aa22.37■■□□□ 1.17
Sec61a1-201ENSMUST00000032168 Lrrc7Q80TE7 1490 aa22.36■■□□□ 1.17
Sec61a1-201ENSMUST00000032168 Skint5A7XUY5 1461 aa22.36■■□□□ 1.17
Sec61a1-201ENSMUST00000032168 Neurod2Q62414 383 aa22.35■■□□□ 1.17
Sec61a1-201ENSMUST00000032168 IqubQ8CDK3 788 aa22.35■■□□□ 1.17
Sec61a1-201ENSMUST00000032168 Uggt1Q6P5E4 1551 aa22.35■■□□□ 1.17
Sec61a1-201ENSMUST00000032168 DnmbpQ6TXD4 1580 aa22.35■■□□□ 1.17
Sec61a1-201ENSMUST00000032168 Shq1Q7TMX5 569 aa22.34■■□□□ 1.17
Sec61a1-201ENSMUST00000032168 Mroh1E0CZ22 1640 aa22.33■■□□□ 1.17
Sec61a1-201ENSMUST00000032168 Kiaa0556Q8C753 1610 aa22.33■■□□□ 1.17
Sec61a1-201ENSMUST00000032168 PalldQ9ET54 1408 aa22.32■■□□□ 1.16
Sec61a1-201ENSMUST00000032168 Arid4bA2CG63 1314 aaKnown RBP22.31■■□□□ 1.16
Sec61a1-201ENSMUST00000032168 Prrc2bQ7TPM1 1486 aaKnown RBP22.31■■□□□ 1.16
Sec61a1-201ENSMUST00000032168 Speer4f1Q9D5Q6 258 aa22.3■■□□□ 1.16
Sec61a1-201ENSMUST00000032168 Myom1Q62234 1667 aaKnown RBP22.29■■□□□ 1.16
Sec61a1-201ENSMUST00000032168 Liat1Q810M6 228 aa22.28■■□□□ 1.16
Sec61a1-201ENSMUST00000032168 Mink1Q9JM52 1308 aa22.28■■□□□ 1.16
Sec61a1-201ENSMUST00000032168 Q9D9H8 365 aa22.28■■□□□ 1.16
Sec61a1-201ENSMUST00000032168 Apbb1Q9QXJ1 710 aa22.28■■□□□ 1.16
Sec61a1-201ENSMUST00000032168 Pak3Q61036 559 aa22.27■■□□□ 1.16
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms