RNA–Protein interactions for RNA: ENSMUST00000030914.3

Rer1-201, Transcript of Protein RER1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rer1, Length 1,596 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1-201ENSMUST00000030914 Pip4k2bQ80XI4 416 aa28.74■■■□□ 2.19
Rer1-201ENSMUST00000030914 Arid4bA2CG63 1314 aaKnown RBP28.74■■■□□ 2.19
Rer1-201ENSMUST00000030914 Txndc2Q6P902 515 aa28.72■■■□□ 2.19
Rer1-201ENSMUST00000030914 Gemin5Q8BX17 1502 aaKnown RBP28.72■■■□□ 2.19
Rer1-201ENSMUST00000030914 Hdac5Q9Z2V6 1113 aa28.71■■■□□ 2.19
Rer1-201ENSMUST00000030914 Eif2ak4Q9QZ05 1648 aa28.68■■■□□ 2.18
Rer1-201ENSMUST00000030914 PplQ9R269 1755 aa28.68■■■□□ 2.18
Rer1-201ENSMUST00000030914 Zc3h13E9Q784 1729 aaKnown RBP28.68■■■□□ 2.18
Rer1-201ENSMUST00000030914 Rprd2Q6NXI6 1469 aaKnown RBP28.68■■■□□ 2.18
Rer1-201ENSMUST00000030914 Usp47Q8BY87 1376 aa28.67■■■□□ 2.18
Rer1-201ENSMUST00000030914 Washc2Q6PGL7 1334 aa28.67■■■□□ 2.18
Rer1-201ENSMUST00000030914 P3h3Q8CG70 732 aa28.66■■■□□ 2.18
Rer1-201ENSMUST00000030914 Rock1P70335 1354 aa28.64■■■□□ 2.18
Rer1-201ENSMUST00000030914 Myo3aQ8K3H5 1613 aa28.64■■■□□ 2.18
Rer1-201ENSMUST00000030914 Hspa5P20029 655 aaKnown RBP28.63■■■□□ 2.17
Rer1-201ENSMUST00000030914 Myom1Q62234 1667 aaKnown RBP28.61■■■□□ 2.17
Rer1-201ENSMUST00000030914 Mroh3A0A1D5RM54 893 aa28.61■■■□□ 2.17
Rer1-201ENSMUST00000030914 AU022751B1B0V2 589 aa28.61■■■□□ 2.17
Rer1-201ENSMUST00000030914 Psme1P97371 249 aa28.61■■■□□ 2.17
Rer1-201ENSMUST00000030914 Iqgap1Q9JKF1 1657 aaKnown RBP28.59■■■□□ 2.17
Rer1-201ENSMUST00000030914 IghaA0A0A6YXW6 389 aa28.58■■■□□ 2.17
Rer1-201ENSMUST00000030914 Plxnc1Q9QZC2 1574 aa28.57■■■□□ 2.16
Rer1-201ENSMUST00000030914 Rgl3Q3UYI5 709 aa28.56■■■□□ 2.16
Rer1-201ENSMUST00000030914 Gm13695A2AK44 830 aa28.55■■■□□ 2.16
Rer1-201ENSMUST00000030914 Nrxn3Q6P9K9 1571 aa28.55■■■□□ 2.16
Rer1-201ENSMUST00000030914 Tulp4Q9JIL5 1547 aa28.54■■■□□ 2.16
Rer1-201ENSMUST00000030914 Lmtk3Q5XJV6 1424 aa28.54■■■□□ 2.16
Rer1-201ENSMUST00000030914 Adamts13Q769J6 1426 aa28.54■■■□□ 2.16
Rer1-201ENSMUST00000030914 Arhgef28P97433 1693 aa28.52■■■□□ 2.16
Rer1-201ENSMUST00000030914 Setd1aE9PYH6 1716 aa28.52■■■□□ 2.16
Rer1-201ENSMUST00000030914 Rapgef3Q8VCC8 918 aa28.52■■■□□ 2.16
Rer1-201ENSMUST00000030914 PalldQ9ET54 1408 aa28.52■■■□□ 2.16
Rer1-201ENSMUST00000030914 Med1Q925J9 1575 aa28.51■■■□□ 2.15
Rer1-201ENSMUST00000030914 Asxl2Q8BZ32 1370 aa28.5■■■□□ 2.15
Rer1-201ENSMUST00000030914 Rims1Q99NE5 1463 aa28.49■■■□□ 2.15
Rer1-201ENSMUST00000030914 Slit3Q9WVB4 1523 aa28.49■■■□□ 2.15
Rer1-201ENSMUST00000030914 Tubgcp6G5E8P0 1769 aa28.47■■■□□ 2.15
Rer1-201ENSMUST00000030914 Gli3Q61602 1583 aa28.46■■■□□ 2.15
Rer1-201ENSMUST00000030914 Atp1b4Q99ME6 356 aa28.45■■■□□ 2.15
Rer1-201ENSMUST00000030914 Ifit1bl1D3Z6F0 470 aa28.41■■■□□ 2.14
Rer1-201ENSMUST00000030914 Q9D9H8 365 aa28.41■■■□□ 2.14
Rer1-201ENSMUST00000030914 Thsd7aQ69ZU6 1645 aa28.4■■■□□ 2.14
Rer1-201ENSMUST00000030914 Shq1Q7TMX5 569 aa28.4■■■□□ 2.14
Rer1-201ENSMUST00000030914 PzpQ61838 1495 aa28.38■■■□□ 2.13
Rer1-201ENSMUST00000030914 Cep152A2AUM9 1736 aaKnown RBP28.37■■■□□ 2.13
Rer1-201ENSMUST00000030914 Grwd1Q810D6 446 aaKnown RBP28.35■■■□□ 2.13
Rer1-201ENSMUST00000030914 MaddQ80U28 1577 aa28.34■■■□□ 2.13
Rer1-201ENSMUST00000030914 Cdk13Q69ZA1 1511 aaKnown RBP28.33■■■□□ 2.13
Rer1-201ENSMUST00000030914 Kdm2aP59997 1161 aa28.32■■■□□ 2.12
Rer1-201ENSMUST00000030914 Cdk5rap2Q8K389 1822 aa28.29■■■□□ 2.12
Rer1-201ENSMUST00000030914 Neurod1Q60867 357 aa28.28■■■□□ 2.12
Rer1-201ENSMUST00000030914 Arap3Q8R5G7 1538 aa28.28■■■□□ 2.12
Rer1-201ENSMUST00000030914 Acin1Q9JIX8 1338 aaKnown RBP28.28■■■□□ 2.12
Rer1-201ENSMUST00000030914 Slc52a2Q9D8F3 450 aa28.28■■■□□ 2.12
Rer1-201ENSMUST00000030914 Pik3r4Q8VD65 1358 aa28.26■■■□□ 2.11
Rer1-201ENSMUST00000030914 Srpk2O54781 681 aaKnown RBP28.25■■■□□ 2.11
Rer1-201ENSMUST00000030914 Fan1Q69ZT1 1020 aa28.25■■■□□ 2.11
Rer1-201ENSMUST00000030914 Os9Q8K2C7 672 aa28.24■■■□□ 2.11
Rer1-201ENSMUST00000030914 Polr3aB2RXC6 1390 aa28.23■■■□□ 2.11
Rer1-201ENSMUST00000030914 Mbd5B1AYB6 1498 aa28.22■■■□□ 2.11
Rer1-201ENSMUST00000030914 NefmP08553 848 aa28.21■■■□□ 2.11
Rer1-201ENSMUST00000030914 Cpsf1Q9EPU4 1441 aaKnown RBP28.2■■■□□ 2.1
Rer1-201ENSMUST00000030914 Gm20521D3Z5F7 333 aa28.2■■■□□ 2.1
Rer1-201ENSMUST00000030914 Puf60Q3UEB3 564 aaKnown RBP28.2■■■□□ 2.1
Rer1-201ENSMUST00000030914 Mug2P28666 1451 aa28.19■■■□□ 2.1
Rer1-201ENSMUST00000030914 Lrrc7Q80TE7 1490 aa28.19■■■□□ 2.1
Rer1-201ENSMUST00000030914 Tns3Q5SSZ5 1440 aa28.19■■■□□ 2.1
Rer1-201ENSMUST00000030914 Col18a1P39061 1774 aa28.18■■■□□ 2.1
Rer1-201ENSMUST00000030914 HnrnpmQ9D0E1 729 aaKnown RBP28.17■■■□□ 2.1
Rer1-201ENSMUST00000030914 Cps1Q8C196 1500 aa28.17■■■□□ 2.1
Rer1-201ENSMUST00000030914 Ift172Q6VH22 1749 aa28.16■■■□□ 2.1
Rer1-201ENSMUST00000030914 Stk26Q99JT2 416 aa28.16■■■□□ 2.1
Rer1-201ENSMUST00000030914 Sipa1l1Q8C0T5 1782 aa28.16■■■□□ 2.1
Rer1-201ENSMUST00000030914 Amigo3Q8C2S7 508 aa28.14■■■□□ 2.1
Rer1-201ENSMUST00000030914 TonslQ6NZL6 1363 aa28.13■■■□□ 2.09
Rer1-201ENSMUST00000030914 Cep170bQ80U49 1574 aa28.13■■■□□ 2.09
Rer1-201ENSMUST00000030914 Utp14aQ640M1 767 aaKnown RBP28.11■■■□□ 2.09
Rer1-201ENSMUST00000030914 Unc13bQ9Z1N9 1602 aa28.08■■■□□ 2.09
Rer1-201ENSMUST00000030914 Tmem94Q7TSH8 1360 aa28.05■■■□□ 2.08
Rer1-201ENSMUST00000030914 Slain2Q8CI08 581 aa28.04■■■□□ 2.08
Rer1-201ENSMUST00000030914 Hspa1lP16627 641 aa28.03■■■□□ 2.08
Rer1-201ENSMUST00000030914 Ppargc1bQ8VHJ7 1014 aa28.03■■■□□ 2.08
Rer1-201ENSMUST00000030914 RalgapbQ8BQZ4 1484 aa28.03■■■□□ 2.08
Rer1-201ENSMUST00000030914 Col14a1Q80X19 1797 aa28.02■■■□□ 2.08
Rer1-201ENSMUST00000030914 Usp40Q8BWR4 1235 aa28.02■■■□□ 2.08
Rer1-201ENSMUST00000030914 DnmbpQ6TXD4 1580 aa28.02■■■□□ 2.08
Rer1-201ENSMUST00000030914 Usp32F8VPZ3 1604 aa28.01■■■□□ 2.07
Rer1-201ENSMUST00000030914 Evi5lH3BKQ3 813 aa28.01■■■□□ 2.07
Rer1-201ENSMUST00000030914 Plekhg1F6S200 1446 aa28.01■■■□□ 2.07
Rer1-201ENSMUST00000030914 Dapk1Q80YE7 1442 aa28.01■■■□□ 2.07
Rer1-201ENSMUST00000030914 Kif20bQ80WE4 1774 aaKnown RBP28■■■□□ 2.07
Rer1-201ENSMUST00000030914 NalcnQ8BXR5 1738 aa28■■■□□ 2.07
Rer1-201ENSMUST00000030914 Itsn2Q9Z0R6 1659 aa27.99■■■□□ 2.07
Rer1-201ENSMUST00000030914 Nphp4P59240 1425 aa27.97■■■□□ 2.07
Rer1-201ENSMUST00000030914 Rreb1Q3UH06 1700 aaKnown RBP27.97■■■□□ 2.07
Rer1-201ENSMUST00000030914 Fbxo41Q6NS60 873 aa27.96■■■□□ 2.07
Rer1-201ENSMUST00000030914 Abca14E9Q8F8 1683 aa27.96■■■□□ 2.07
Rer1-201ENSMUST00000030914 Nwd1A6H603 1563 aa27.96■■■□□ 2.07
Rer1-201ENSMUST00000030914 Rundc1Q0VDN7 615 aa27.95■■■□□ 2.07
Rer1-201ENSMUST00000030914 IqubQ8CDK3 788 aa27.95■■■□□ 2.07
Retrieved 100 of 22,080 RNA–protein pairs in 11.8 ms