RNA–Protein interactions for RNA: ENSMUST00000029414.11

Ssr3-201, Transcript of Translocon-associated protein subunit gamma, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-201ENSMUST00000029414 Cd109Q8R422 1442 aa12.01□□□□□ -0.49
Ssr3-201ENSMUST00000029414 Naip7Q9JIB3 1402 aa12.01□□□□□ -0.49
Ssr3-201ENSMUST00000029414 Arid4bA2CG63 1314 aaKnown RBP11.98□□□□□ -0.49
Ssr3-201ENSMUST00000029414 Ttll5Q8CHB8 1328 aa11.98□□□□□ -0.49
Ssr3-201ENSMUST00000029414 Mroh1E0CZ22 1640 aa11.97□□□□□ -0.49
Ssr3-201ENSMUST00000029414 Atp7aQ64430 1491 aa11.95□□□□□ -0.5
Ssr3-201ENSMUST00000029414 Pik3c2gO70167 1506 aa11.95□□□□□ -0.5
Ssr3-201ENSMUST00000029414 Arhgef28P97433 1693 aa11.94□□□□□ -0.5
Ssr3-201ENSMUST00000029414 Myom1Q62234 1667 aaKnown RBP11.94□□□□□ -0.5
Ssr3-201ENSMUST00000029414 Col18a1P39061 1774 aa11.93□□□□□ -0.5
Ssr3-201ENSMUST00000029414 Txndc2Q6P902 515 aa11.93□□□□□ -0.5
Ssr3-201ENSMUST00000029414 DnmbpQ6TXD4 1580 aa11.92□□□□□ -0.5
Ssr3-201ENSMUST00000029414 Hspa1lP16627 641 aa11.92□□□□□ -0.5
Ssr3-201ENSMUST00000029414 PalldQ9ET54 1408 aa11.92□□□□□ -0.5
Ssr3-201ENSMUST00000029414 Slit3Q9WVB4 1523 aa11.92□□□□□ -0.5
Ssr3-201ENSMUST00000029414 Prrc2bQ7TPM1 1486 aaKnown RBP11.91□□□□□ -0.5
Ssr3-201ENSMUST00000029414 Trak1Q6PD31 939 aa11.9□□□□□ -0.5
Ssr3-201ENSMUST00000029414 Edc4Q3UJB9 1406 aaKnown RBP11.9□□□□□ -0.5
Ssr3-201ENSMUST00000029414 Ecm2Q5FW85 670 aa11.9□□□□□ -0.5
Ssr3-201ENSMUST00000029414 Cdk13Q69ZA1 1511 aaKnown RBP11.89□□□□□ -0.51
Ssr3-201ENSMUST00000029414 Rprd2Q6NXI6 1469 aaKnown RBP11.89□□□□□ -0.51
Ssr3-201ENSMUST00000029414 Unc13bQ9Z1N9 1602 aa11.89□□□□□ -0.51
Ssr3-201ENSMUST00000029414 Erich6D3Z6S9 713 aa11.89□□□□□ -0.51
Ssr3-201ENSMUST00000029414 ErbinQ80TH2 1402 aa11.89□□□□□ -0.51
Ssr3-201ENSMUST00000029414 Plxnc1Q9QZC2 1574 aa11.89□□□□□ -0.51
Ssr3-201ENSMUST00000029414 Pik3c2aQ61194 1686 aa11.87□□□□□ -0.51
Ssr3-201ENSMUST00000029414 Psme1P97371 249 aa11.87□□□□□ -0.51
Ssr3-201ENSMUST00000029414 Stk24Q99KH8 431 aa11.86□□□□□ -0.51
Ssr3-201ENSMUST00000029414 Arap3Q8R5G7 1538 aa11.86□□□□□ -0.51
Ssr3-201ENSMUST00000029414 P3h3Q8CG70 732 aa11.85□□□□□ -0.51
Ssr3-201ENSMUST00000029414 IghaA0A0A6YXW6 389 aa11.85□□□□□ -0.51
Ssr3-201ENSMUST00000029414 Gm13695A2AK44 830 aa11.85□□□□□ -0.51
Ssr3-201ENSMUST00000029414 Dot1lQ6XZL8 1540 aa11.85□□□□□ -0.51
Ssr3-201ENSMUST00000029414 Mbd5B1AYB6 1498 aa11.84□□□□□ -0.51
Ssr3-201ENSMUST00000029414 AatkQ80YE4 1365 aa11.84□□□□□ -0.51
Ssr3-201ENSMUST00000029414 MaddQ80U28 1577 aa11.84□□□□□ -0.51
Ssr3-201ENSMUST00000029414 Sall3Q62255 1320 aa11.83□□□□□ -0.52
Ssr3-201ENSMUST00000029414 Ankrd36D3Z4K0 1415 aa11.83□□□□□ -0.52
Ssr3-201ENSMUST00000029414 Ift172Q6VH22 1749 aa11.82□□□□□ -0.52
Ssr3-201ENSMUST00000029414 Mphosph9A6H5Y1 991 aa11.82□□□□□ -0.52
Ssr3-201ENSMUST00000029414 Bcl11bQ99PV8 884 aa11.82□□□□□ -0.52
Ssr3-201ENSMUST00000029414 Tns3Q5SSZ5 1440 aa11.82□□□□□ -0.52
Ssr3-201ENSMUST00000029414 Ppip5k1A2ARP1 1436 aa11.81□□□□□ -0.52
Ssr3-201ENSMUST00000029414 Amigo3Q8C2S7 508 aa11.8□□□□□ -0.52
Ssr3-201ENSMUST00000029414 Col14a1Q80X19 1797 aa11.8□□□□□ -0.52
Ssr3-201ENSMUST00000029414 Dhx9O70133 1380 aaKnown RBP11.8□□□□□ -0.52
Ssr3-201ENSMUST00000029414 Bcl11aQ9QYE3 773 aa11.8□□□□□ -0.52
Ssr3-201ENSMUST00000029414 Pik3r4Q8VD65 1358 aa11.79□□□□□ -0.52
Ssr3-201ENSMUST00000029414 Kif20bQ80WE4 1774 aaKnown RBP11.79□□□□□ -0.52
Ssr3-201ENSMUST00000029414 Asxl2Q8BZ32 1370 aa11.79□□□□□ -0.52
Ssr3-201ENSMUST00000029414 Hdac5Q9Z2V6 1113 aa11.79□□□□□ -0.52
Ssr3-201ENSMUST00000029414 NalcnQ8BXR5 1738 aa11.78□□□□□ -0.52
Ssr3-201ENSMUST00000029414 Nwd1A6H603 1563 aa11.77□□□□□ -0.53
Ssr3-201ENSMUST00000029414 Cps1Q8C196 1500 aa11.77□□□□□ -0.53
Ssr3-201ENSMUST00000029414 AU022751B1B0V2 589 aa11.76□□□□□ -0.53
Ssr3-201ENSMUST00000029414 PrkcshO08795 521 aa11.76□□□□□ -0.53
Ssr3-201ENSMUST00000029414 Brinp3Q499E0 766 aa11.76□□□□□ -0.53
Ssr3-201ENSMUST00000029414 Itsn2Q9Z0R6 1659 aa11.75□□□□□ -0.53
Ssr3-201ENSMUST00000029414 Rims1Q99NE5 1463 aa11.75□□□□□ -0.53
Ssr3-201ENSMUST00000029414 Cep152A2AUM9 1736 aaKnown RBP11.75□□□□□ -0.53
Ssr3-201ENSMUST00000029414 GapdhsQ64467 440 aa11.74□□□□□ -0.53
Ssr3-201ENSMUST00000029414 Tulp4Q9JIL5 1547 aa11.73□□□□□ -0.53
Ssr3-201ENSMUST00000029414 Ccer2J3QPU5 274 aa11.73□□□□□ -0.53
Ssr3-201ENSMUST00000029414 Cdk5rap2Q8K389 1822 aa11.73□□□□□ -0.53
Ssr3-201ENSMUST00000029414 D430041D05RikF6ZGR6 1678 aa11.73□□□□□ -0.53
Ssr3-201ENSMUST00000029414 Pkd2O35245 966 aa11.73□□□□□ -0.53
Ssr3-201ENSMUST00000029414 Slain2Q8CI08 581 aa11.71□□□□□ -0.53
Ssr3-201ENSMUST00000029414 Atp1b4Q99ME6 356 aa11.71□□□□□ -0.53
Ssr3-201ENSMUST00000029414 Ehmt2Q9Z148 1263 aaKnown RBP11.71□□□□□ -0.53
Ssr3-201ENSMUST00000029414 Zfp142G5E869 1843 aa11.71□□□□□ -0.53
Ssr3-201ENSMUST00000029414 Q9D9H8 365 aa11.71□□□□□ -0.54
Ssr3-201ENSMUST00000029414 Rreb1Q3UH06 1700 aaKnown RBP11.71□□□□□ -0.54
Ssr3-201ENSMUST00000029414 Rock1P70335 1354 aa11.71□□□□□ -0.54
Ssr3-201ENSMUST00000029414 Sipa1l1Q8C0T5 1782 aa11.71□□□□□ -0.54
Ssr3-201ENSMUST00000029414 Wnk3Q80XP9 1757 aa11.7□□□□□ -0.54
Ssr3-201ENSMUST00000029414 Tom1O88746 492 aa11.7□□□□□ -0.54
Ssr3-201ENSMUST00000029414 C3P01027 1663 aa11.7□□□□□ -0.54
Ssr3-201ENSMUST00000029414 Evi5lH3BKQ3 813 aa11.7□□□□□ -0.54
Ssr3-201ENSMUST00000029414 Shq1Q7TMX5 569 aa11.7□□□□□ -0.54
Ssr3-201ENSMUST00000029414 Washc2Q6PGL7 1334 aa11.69□□□□□ -0.54
Ssr3-201ENSMUST00000029414 Usp32F8VPZ3 1604 aa11.69□□□□□ -0.54
Ssr3-201ENSMUST00000029414 Adamts13Q769J6 1426 aa11.68□□□□□ -0.54
Ssr3-201ENSMUST00000029414 Mroh3A0A1D5RM54 893 aa11.68□□□□□ -0.54
Ssr3-201ENSMUST00000029414 Dapk1Q80YE7 1442 aa11.68□□□□□ -0.54
Ssr3-201ENSMUST00000029414 Gimap5Q8BWF2 308 aa11.68□□□□□ -0.54
Ssr3-201ENSMUST00000029414 Pik3c2bE9QAN8 1632 aa11.67□□□□□ -0.54
Ssr3-201ENSMUST00000029414 Amer1Q7TS75 1132 aa11.67□□□□□ -0.54
Ssr3-201ENSMUST00000029414 Tmem94Q7TSH8 1360 aa11.66□□□□□ -0.54
Ssr3-201ENSMUST00000029414 C5P06684 1680 aa11.66□□□□□ -0.54
Ssr3-201ENSMUST00000029414 Marf1Q8BJ34 1730 aaKnown RBP11.66□□□□□ -0.54
Ssr3-201ENSMUST00000029414 Sipa1l2Q80TE4 1722 aa11.65□□□□□ -0.54
Ssr3-201ENSMUST00000029414 N4bp2F8VQG7 1678 aaKnown RBP11.65□□□□□ -0.54
Ssr3-201ENSMUST00000029414 HnrnpmQ9D0E1 729 aaKnown RBP11.65□□□□□ -0.54
Ssr3-201ENSMUST00000029414 PtprvP70289 1705 aa11.65□□□□□ -0.54
Ssr3-201ENSMUST00000029414 Als2Q920R0 1651 aa11.65□□□□□ -0.55
Ssr3-201ENSMUST00000029414 Slit2Q9R1B9 1521 aa11.65□□□□□ -0.55
Ssr3-201ENSMUST00000029414 Nhsl1Q8CAF4 1587 aa11.64□□□□□ -0.55
Ssr3-201ENSMUST00000029414 CenpbP27790 599 aa11.64□□□□□ -0.55
Ssr3-201ENSMUST00000029414 Slc52a2Q9D8F3 450 aa11.64□□□□□ -0.55
Ssr3-201ENSMUST00000029414 Atf3Q60765 181 aa11.62□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 87.8 ms