RNA–Protein interactions for RNA: snR78

snR78, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR78, Length 87 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR78snR78 FSF1Q12029 327 aaKnown RBP0.94□□□□□ -2.26
snR78snR78 TSC3Q3E790 80 aa0.94□□□□□ -2.26
snR78snR78 MRPL50P53724 139 aa0.93□□□□□ -2.26
snR78snR78 SIP3P38717 1229 aa0.92□□□□□ -2.26
snR78snR78 TRM9P49957 279 aa0.92□□□□□ -2.26
snR78snR78 RCE1Q03530 315 aa0.92□□□□□ -2.26
snR78snR78 CUE1P38428 203 aa0.91□□□□□ -2.26
snR78snR78 EDC3P39998 551 aaKnown RBP0.91□□□□□ -2.26
snR78snR78 PAM18Q07914 168 aa0.91□□□□□ -2.26
snR78snR78 ATG40Q99325 256 aa0.91□□□□□ -2.26
snR78snR78 TIM9O74700 87 aa0.9□□□□□ -2.27
snR78snR78 YHR212W-AP0CX91 67 aa0.9□□□□□ -2.27
snR78snR78 YAE1P47118 141 aaPredicted RBP0.9□□□□□ -2.27
snR78snR78 ARO8P53090 500 aaKnown RBP0.9□□□□□ -2.27
snR78snR78 NSA1P53136 463 aaPredicted RBP0.9□□□□□ -2.27
snR78snR78 KRE28Q04431 385 aa0.9□□□□□ -2.27
snR78snR78 KAP95Q06142 861 aaKnown RBP0.9□□□□□ -2.27
snR78snR78 GPM2Q12008 311 aa0.9□□□□□ -2.27
snR78snR78 FLX1P40464 311 aa0.89□□□□□ -2.27
snR78snR78 GVP36P40531 326 aaKnown RBP0.89□□□□□ -2.27
snR78snR78 BNA6P43619 295 aa0.89□□□□□ -2.27
snR78snR78 CDC10P25342 322 aaKnown RBP0.88□□□□□ -2.27
snR78snR78 OPY1P38271 328 aa0.88□□□□□ -2.27
snR78snR78 YFL065CP43539 102 aa0.88□□□□□ -2.27
snR78snR78 YLR236CA0A023PZG4 107 aa0.87□□□□□ -2.27
snR78snR78 SIR2P06700 562 aa0.87□□□□□ -2.27
snR78snR78 MRPL25P23369 157 aa0.87□□□□□ -2.27
snR78snR78 PRE6P40303 254 aaKnown RBP0.87□□□□□ -2.27
snR78snR78 TDA8Q6B2U8 126 aa0.87□□□□□ -2.27
snR78snR78 SKG1P36169 355 aa0.86□□□□□ -2.27
snR78snR78 YHR007C-AQ07074 71 aa0.86□□□□□ -2.27
snR78snR78 ATG31Q12421 196 aa0.86□□□□□ -2.27
snR78snR78 DRS2P39524 1355 aa0.85□□□□□ -2.27
snR78snR78 BCY1P07278 416 aaKnown RBP0.85□□□□□ -2.27
snR78snR78 SHE2P36068 246 aaKnown RBP RIP-Chip data0.84□□□□□ -2.27not detected
snR78snR78 YHL042WP38729 150 aa0.84□□□□□ -2.27
snR78snR78 PRM8P53174 237 aa0.84□□□□□ -2.27
snR78snR78 CWC27Q02770 301 aa0.84□□□□□ -2.27
snR78snR78 CUE4Q04201 117 aaPredicted RBP0.84□□□□□ -2.27
snR78snR78 RAD28Q12021 506 aa0.84□□□□□ -2.27
snR78snR78 SEC11P15367 167 aa0.83□□□□□ -2.28
snR78snR78 NTF2P33331 125 aaKnown RBP0.83□□□□□ -2.28
snR78snR78 MCP1Q12106 302 aa0.82□□□□□ -2.28
snR78snR78 SPT3P06844 337 aa0.81□□□□□ -2.28
snR78snR78 RIB7P33312 244 aa0.81□□□□□ -2.28
snR78snR78 YBR285WP38354 144 aa0.81□□□□□ -2.28
snR78snR78 NUP84P52891 726 aa0.81□□□□□ -2.28
snR78snR78 YNL134CP53912 376 aaKnown RBP0.81□□□□□ -2.28
snR78snR78 RPT5P33297 434 aaKnown RBP0.8□□□□□ -2.28
snR78snR78 VMA22P38784 181 aa0.79□□□□□ -2.28
snR78snR78 YNL247WP53852 767 aaKnown RBP0.79□□□□□ -2.28
snR78snR78 URA6P15700 204 aa0.78□□□□□ -2.28
snR78snR78 DBF2P22204 572 aa0.78□□□□□ -2.28
snR78snR78 SEC17P32602 292 aa0.78□□□□□ -2.28
snR78snR78 YLR173WQ06247 608 aa0.78□□□□□ -2.28
snR78snR78 LDB7P38210 180 aa0.77□□□□□ -2.29
snR78snR78 RRT8Q08219 342 aa0.77□□□□□ -2.29
snR78snR78 CDC28P00546 298 aaKnown RBP0.76□□□□□ -2.29
snR78snR78 RPO26P20435 155 aa0.76□□□□□ -2.29
snR78snR78 HYR1P40581 163 aaKnown RBP0.76□□□□□ -2.29
snR78snR78 YUH1P35127 236 aa0.75□□□□□ -2.29
snR78snR78 UTP30P36144 274 aaKnown RBP0.75□□□□□ -2.29
snR78snR78 LIA1P47120 325 aaKnown RBP0.75□□□□□ -2.29
snR78snR78 FYV6P53913 173 aa0.75□□□□□ -2.29
snR78snR78 YDR274CP87283 123 aa0.75□□□□□ -2.29
snR78snR78 CDC123Q05791 360 aa0.75□□□□□ -2.29
snR78snR78 YOL160WQ08321 113 aa0.75□□□□□ -2.29
snR78snR78 RRP36Q12481 300 aaPredicted RBP0.75□□□□□ -2.29
snR78snR78 FAR7P43592 221 aa0.73□□□□□ -2.29
snR78snR78 MDM35O60200 86 aa0.72□□□□□ -2.29
snR78snR78 STP22P25604 385 aa0.72□□□□□ -2.29
snR78snR78 LCL2Q08045 131 aa0.72□□□□□ -2.29
snR78snR78 MED4Q12343 284 aa0.72□□□□□ -2.29
snR78snR78 URA5P13298 226 aaKnown RBP0.71□□□□□ -2.3
snR78snR78 YER034WP40022 185 aaKnown RBP0.71□□□□□ -2.3
snR78snR78 YFH7P43591 353 aa0.71□□□□□ -2.3
snR78snR78 BET1P22804 142 aa0.7□□□□□ -2.3
snR78snR78 TCA17P32613 152 aa0.7□□□□□ -2.3
snR78snR78 YPL073CP40323 161 aa0.7□□□□□ -2.3
snR78snR78 FMC1P40491 155 aa0.7□□□□□ -2.3
snR78snR78 BXI1P48558 297 aa0.7□□□□□ -2.3
snR78snR78 SRL4Q03085 281 aa0.7□□□□□ -2.3
snR78snR78 APS1P35181 156 aa0.69□□□□□ -2.3
snR78snR78 YMR252CQ04814 134 aa0.69□□□□□ -2.3
snR78snR78 YPR174CQ06616 221 aaPredicted RBP0.69□□□□□ -2.3
snR78snR78 KSS1P14681 368 aa0.68□□□□□ -2.3
snR78snR78 IDH1P28834 360 aaKnown RBP RIP-Chip data0.68□□□□□ -2.3not detected
snR78snR78 SSO1P32867 290 aa0.68□□□□□ -2.3
snR78snR78 AST2P39945 430 aaKnown RBP0.68□□□□□ -2.3
snR78snR78 BRR6P53062 197 aa0.68□□□□□ -2.3
snR78snR78 YRA1Q12159 226 aaKnown RBP0.68□□□□□ -2.3
snR78snR78 PRP8P33334 2413 aaKnown RBP0.68□□□□□ -2.3
snR78snR78 YCL042WP25572 119 aa0.67□□□□□ -2.3
snR78snR78 RMD6P39975 231 aa0.67□□□□□ -2.3
snR78snR78 YDR249CQ03787 373 aa0.67□□□□□ -2.3
snR78snR78 RPL27AP0C2H6 136 aaKnown RBP0.66□□□□□ -2.3
snR78snR78 RPC17P47076 161 aa0.66□□□□□ -2.3
snR78snR78 PTM1P32857 523 aa0.65□□□□□ -2.31
snR78snR78 TVP23P38962 199 aa0.65□□□□□ -2.31
snR78snR78 COX15P40086 486 aa0.65□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms