RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	SEC72	P39742	193 aa	Known RBP	1.14	□□□□□ -2.23
RLM1	YPL089C	RMD6	P39975	231 aa		1.14	□□□□□ -2.23
RLM1	YPL089C	RSM25	P40496	264 aa		1.14	□□□□□ -2.23
RLM1	YPL089C	ERG10	P41338	398 aa	Known RBP	1.14	□□□□□ -2.23
RLM1	YPL089C	YJR146W	P47174	117 aa		1.14	□□□□□ -2.23
RLM1	YPL089C	RPL26B	P53221	127 aa	Known RBP	1.14	□□□□□ -2.23
RLM1	YPL089C	GRE1	Q08969	168 aa		1.14	□□□□□ -2.23
RLM1	YPL089C	AKR2	Q12013	749 aa		1.14	□□□□□ -2.23
RLM1	YPL089C	PSF1	Q12488	208 aa		1.14	□□□□□ -2.23
RLM1	YPL089C	REP2	P03872	296 aa		1.13	□□□□□ -2.23
RLM1	YPL089C	MRS1	P07266	363 aa		1.13	□□□□□ -2.23
RLM1	YPL089C	YLR156W	P0CE96	114 aa		1.13	□□□□□ -2.23
RLM1	YPL089C	YLR159W	P0CE97	114 aa		1.13	□□□□□ -2.23
RLM1	YPL089C	YLR161W	P0CE98	114 aa		1.13	□□□□□ -2.23
RLM1	YPL089C	PTM1	P32857	523 aa		1.13	□□□□□ -2.23
RLM1	YPL089C	POP4	P38336	279 aa		1.13	□□□□□ -2.23
RLM1	YPL089C	EGD2	P38879	174 aa	Known RBP	1.13	□□□□□ -2.23
RLM1	YPL089C	IGO1	P53897	168 aa		1.13	□□□□□ -2.23
RLM1	YPL089C	COG5	P53951	403 aa		1.13	□□□□□ -2.23
RLM1	YPL089C	GGA1	Q06336	557 aa		1.13	□□□□□ -2.23
RLM1	YPL089C	SUE1	Q06524	206 aa		1.13	□□□□□ -2.23
RLM1	YPL089C	USB1	Q12208	290 aa	Known RBP	1.13	□□□□□ -2.23
RLM1	YPL089C	CDC8	P00572	216 aa		1.13	□□□□□ -2.23
RLM1	YPL089C	KSS1	P14681	368 aa		1.13	□□□□□ -2.23
RLM1	YPL089C	GRX2	P17695	143 aa	Known RBP	1.13	□□□□□ -2.23
RLM1	YPL089C	RAD51	P25454	400 aa		1.13	□□□□□ -2.23
RLM1	YPL089C	RME1	P32338	300 aa	Known RBP	1.13	□□□□□ -2.23
RLM1	YPL089C	SEC17	P32602	292 aa		1.13	□□□□□ -2.23
RLM1	YPL089C	CAF4	P36130	643 aa		1.13	□□□□□ -2.23
RLM1	YPL089C	UTP30	P36144	274 aa	Known RBP	1.13	□□□□□ -2.23
RLM1	YPL089C	SKG1	P36169	355 aa		1.13	□□□□□ -2.23
RLM1	YPL089C	YHL026C	P38740	315 aa		1.13	□□□□□ -2.23
RLM1	YPL089C	MRPL49	P40858	161 aa	Predicted RBP	1.13	□□□□□ -2.23
RLM1	YPL089C	SNX4	P47057	423 aa		1.13	□□□□□ -2.23
RLM1	YPL089C	DSK2	P48510	373 aa		1.13	□□□□□ -2.23
RLM1	YPL089C	SLM2	P53955	656 aa		1.13	□□□□□ -2.23
RLM1	YPL089C	SNO1	Q03144	224 aa		1.13	□□□□□ -2.23
RLM1	YPL089C	ARO80	Q04052	950 aa		1.13	□□□□□ -2.23
RLM1	YPL089C	TRM12	Q04235	462 aa		1.13	□□□□□ -2.23
RLM1	YPL089C	GIM5	Q04493	163 aa		1.13	□□□□□ -2.23
RLM1	YPL089C	HRT1	Q08273	121 aa		1.13	□□□□□ -2.23
RLM1	YPL089C	YPL162C	Q12042	273 aa		1.13	□□□□□ -2.23
RLM1	YPL089C	YFR032C-B	Q8TGU2	87 aa		1.13	□□□□□ -2.23
RLM1	YPL089C	PUT1	P09368	476 aa		1.12	□□□□□ -2.23
RLM1	YPL089C	SCO1	P23833	295 aa		1.12	□□□□□ -2.23
RLM1	YPL089C	SHG1	P38337	142 aa		1.12	□□□□□ -2.23
RLM1	YPL089C	MED6	P38782	295 aa		1.12	□□□□□ -2.23
RLM1	YPL089C	AST2	P39945	430 aa	Known RBP	1.12	□□□□□ -2.23
RLM1	YPL089C	HMF1	P40037	129 aa	Known RBP	1.12	□□□□□ -2.23
RLM1	YPL089C	POG1	P40473	351 aa		1.12	□□□□□ -2.23
RLM1	YPL089C	COS6	P53344	381 aa		1.12	□□□□□ -2.23
RLM1	YPL089C	NOC4	Q06512	552 aa	Predicted RBP	1.12	□□□□□ -2.23
RLM1	YPL089C	ARR2	Q06597	130 aa		1.12	□□□□□ -2.23
RLM1	YPL089C	VPS68	Q12016	184 aa		1.12	□□□□□ -2.23
RLM1	YPL089C	MCP1	Q12106	302 aa		1.12	□□□□□ -2.23
RLM1	YPL089C	MHT1	Q12525	324 aa		1.12	□□□□□ -2.23
RLM1	YPL089C	IGO2	Q9P305	131 aa		1.12	□□□□□ -2.23
RLM1	YPL089C	QCR6	P00127	147 aa		1.11	□□□□□ -2.23
RLM1	YPL089C	MSW1	P04803	379 aa		1.11	□□□□□ -2.23
RLM1	YPL089C	SIR2	P06700	562 aa		1.11	□□□□□ -2.23
RLM1	YPL089C	MAG1	P22134	296 aa	Known RBP	1.11	□□□□□ -2.23
RLM1	YPL089C	TAH1	P25638	111 aa	Predicted RBP	1.11	□□□□□ -2.23
RLM1	YPL089C	ECM4	P36156	370 aa		1.11	□□□□□ -2.23
RLM1	YPL089C	PDS1	P40316	373 aa	Predicted RBP	1.11	□□□□□ -2.23
RLM1	YPL089C	MNN5	P46982	586 aa		1.11	□□□□□ -2.23
RLM1	YPL089C	YIP3	P53633	176 aa		1.11	□□□□□ -2.23
RLM1	YPL089C	RTC4	P53850	401 aa		1.11	□□□□□ -2.23
RLM1	YPL089C	NRK1	P53915	240 aa		1.11	□□□□□ -2.23
RLM1	YPL089C	YDR249C	Q03787	373 aa		1.11	□□□□□ -2.23
RLM1	YPL089C	YET3	Q07451	203 aa		1.11	□□□□□ -2.23
RLM1	YPL089C	ATO3	Q12359	275 aa		1.11	□□□□□ -2.23
RLM1	YPL089C	IKI3	Q06706	1349 aa	Known RBP	1.11	□□□□□ -2.23
RLM1	YPL089C	RPL35A	P0CX84	120 aa	Known RBP	1.11	□□□□□ -2.23
RLM1	YPL089C	RPL35B	P0CX85	120 aa	Known RBP	1.11	□□□□□ -2.23
RLM1	YPL089C	RPB3	P16370	318 aa	Known RBP	1.11	□□□□□ -2.23
RLM1	YPL089C	SNF6	P18888	332 aa		1.11	□□□□□ -2.23
RLM1	YPL089C	BET1	P22804	142 aa		1.11	□□□□□ -2.23
RLM1	YPL089C	CNB1	P25296	175 aa		1.11	□□□□□ -2.23
RLM1	YPL089C	TRX3	P25372	127 aa		1.11	□□□□□ -2.23
RLM1	YPL089C	CLB6	P32943	380 aa		1.11	□□□□□ -2.23
RLM1	YPL089C	YNL184C	P53876	108 aa		1.11	□□□□□ -2.23
RLM1	YPL089C	SWP1	Q02795	286 aa		1.11	□□□□□ -2.23
RLM1	YPL089C	MIX17	Q03667	156 aa		1.11	□□□□□ -2.23
RLM1	YPL089C	GRX8	Q05926	109 aa		1.11	□□□□□ -2.23
RLM1	YPL089C	NEJ1	Q06148	342 aa		1.11	□□□□□ -2.23
RLM1	YPL089C	YOL024W	Q08172	172 aa		1.11	□□□□□ -2.23
RLM1	YPL089C	TIM9	O74700	87 aa		1.1	□□□□□ -2.23
RLM1	YPL089C	URA5	P13298	226 aa	Known RBP	1.1	□□□□□ -2.23
RLM1	YPL089C	FBA1	P14540	359 aa	Known RBP	1.1	□□□□□ -2.23
RLM1	YPL089C	MRPL17	P36528	281 aa		1.1	□□□□□ -2.23
RLM1	YPL089C	GLE2	P40066	365 aa		1.1	□□□□□ -2.23
RLM1	YPL089C	PRM10	P42946	383 aa		1.1	□□□□□ -2.23
RLM1	YPL089C	UBC12	P52491	188 aa		1.1	□□□□□ -2.23
RLM1	YPL089C	AIF1	P52923	378 aa		1.1	□□□□□ -2.23
RLM1	YPL089C	YGR219W	P53307	113 aa		1.1	□□□□□ -2.23
RLM1	YPL089C	PRM15	Q03262	622 aa		1.1	□□□□□ -2.23
RLM1	YPL089C	SPG3	Q04398	127 aa	Predicted RBP	1.1	□□□□□ -2.23
RLM1	YPL089C	FUS2	Q05670	677 aa		1.1	□□□□□ -2.23
RLM1	YPL089C	YLR036C	Q07986	203 aa		1.1	□□□□□ -2.23
RLM1	YPL089C	RIO1	Q12196	484 aa	Known RBP	1.1	□□□□□ -2.23

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms