RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W AME1P38313 324 aa1.8□□□□□ -2.12
VPS16YPL045W ECM14P38836 430 aa1.8□□□□□ -2.12
VPS16YPL045W SRP14P38985 146 aa1.8□□□□□ -2.12
VPS16YPL045W RPE1P46969 238 aa1.8□□□□□ -2.12
VPS16YPL045W YGR067CP53243 804 aa1.8□□□□□ -2.12
VPS16YPL045W YNL140CP53910 189 aa1.8□□□□□ -2.12
VPS16YPL045W NRK1P53915 240 aa1.8□□□□□ -2.12
VPS16YPL045W OSH6Q02201 448 aa1.8□□□□□ -2.12
VPS16YPL045W NNT1Q05874 261 aa1.8□□□□□ -2.12
VPS16YPL045W NOC4Q06512 552 aaPredicted RBP1.8□□□□□ -2.12
VPS16YPL045W TIM22Q12328 207 aa1.8□□□□□ -2.12
VPS16YPL045W RAD50P12753 1312 aa1.8□□□□□ -2.12
VPS16YPL045W PDR18P53756 1333 aa1.8□□□□□ -2.12
VPS16YPL045W FLO11P08640 1367 aa1.8□□□□□ -2.12
VPS16YPL045W MOT1P32333 1867 aa1.8□□□□□ -2.12
VPS16YPL045W PUT1P09368 476 aa1.79□□□□□ -2.12
VPS16YPL045W GCY1P14065 312 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
VPS16YPL045W TRR1P29509 319 aaKnown RBP1.79□□□□□ -2.12
VPS16YPL045W PRY2P36110 329 aa1.79□□□□□ -2.12
VPS16YPL045W ECM33P38248 429 aaKnown RBP1.79□□□□□ -2.12
VPS16YPL045W SSH1P38353 490 aaKnown RBP1.79□□□□□ -2.12
VPS16YPL045W ECM34P38728 170 aa1.79□□□□□ -2.12
VPS16YPL045W YKE4P40544 346 aa1.79□□□□□ -2.12
VPS16YPL045W UFE1P41834 346 aa1.79□□□□□ -2.12
VPS16YPL045W YFH7P43591 353 aa1.79□□□□□ -2.12
VPS16YPL045W YJL028WP47062 111 aa1.79□□□□□ -2.12
VPS16YPL045W CAX4P53223 239 aa1.79□□□□□ -2.12
VPS16YPL045W ERV29P53337 310 aa1.79□□□□□ -2.12
VPS16YPL045W SSU72P53538 206 aaPredicted RBP1.79□□□□□ -2.12
VPS16YPL045W ARO80Q04052 950 aa1.79□□□□□ -2.12
VPS16YPL045W AGC1Q12482 902 aa1.79□□□□□ -2.12
VPS16YPL045W MRS1P07266 363 aa1.79□□□□□ -2.12
VPS16YPL045W APS1P35181 156 aa1.79□□□□□ -2.12
VPS16YPL045W ECM13P38195 257 aa1.79□□□□□ -2.12
VPS16YPL045W YHL044WP38727 235 aa1.79□□□□□ -2.12
VPS16YPL045W MRPL49P40858 161 aaPredicted RBP1.79□□□□□ -2.12
VPS16YPL045W CAT5P41735 233 aa1.79□□□□□ -2.12
VPS16YPL045W GTR2P53290 341 aa1.79□□□□□ -2.12
VPS16YPL045W YLR460CP54007 376 aa1.79□□□□□ -2.12
VPS16YPL045W NKP2Q06162 153 aa1.79□□□□□ -2.12
VPS16YPL045W YOL019WQ08157 551 aa1.79□□□□□ -2.12
VPS16YPL045W YDL211CQ12121 372 aa1.79□□□□□ -2.12
VPS16YPL045W SMT3Q12306 101 aaKnown RBP1.79□□□□□ -2.12
VPS16YPL045W RIF1P29539 1916 aa1.78□□□□□ -2.12
VPS16YPL045W ADH1P00330 348 aaKnown RBP1.78□□□□□ -2.12
VPS16YPL045W IPP1P00817 287 aaKnown RBP1.78□□□□□ -2.12
VPS16YPL045W SEC4P07560 215 aaKnown RBP1.78□□□□□ -2.12
VPS16YPL045W CPT1P17898 393 aa1.78□□□□□ -2.12
VPS16YPL045W CKA2P19454 339 aa1.78□□□□□ -2.12
VPS16YPL045W YPT53P36019 220 aa1.78□□□□□ -2.12
VPS16YPL045W MTW1P39731 289 aa1.78□□□□□ -2.12
VPS16YPL045W YER189WP40104 122 aa1.78□□□□□ -2.12
VPS16YPL045W FAR7P43592 221 aa1.78□□□□□ -2.12
VPS16YPL045W ILM1P47155 203 aa1.78□□□□□ -2.12
VPS16YPL045W TVP15Q03860 143 aa1.78□□□□□ -2.12
VPS16YPL045W INM2Q05533 292 aa1.78□□□□□ -2.12
VPS16YPL045W YTH1Q06102 208 aaPredicted RBP1.78□□□□□ -2.12
VPS16YPL045W YLR179CQ06252 201 aaKnown RBP1.78□□□□□ -2.12
VPS16YPL045W CBP6P07253 162 aaPredicted RBP1.78□□□□□ -2.12
VPS16YPL045W ZWF1P11412 505 aaKnown RBP1.78□□□□□ -2.12
VPS16YPL045W PRE7P23724 241 aaKnown RBP1.78□□□□□ -2.12
VPS16YPL045W YKR041WP36134 250 aa1.78□□□□□ -2.12
VPS16YPL045W TEM1P38987 245 aa1.78□□□□□ -2.12
VPS16YPL045W AIM25P47140 327 aa1.78□□□□□ -2.12
VPS16YPL045W GRX8Q05926 109 aa1.78□□□□□ -2.12
VPS16YPL045W EMP46Q12396 444 aa1.78□□□□□ -2.12
VPS16YPL045W YPL247CQ12523 523 aa1.78□□□□□ -2.12
VPS16YPL045W QCR2P07257 368 aa1.77□□□□□ -2.13
VPS16YPL045W SEC22P22214 214 aa1.77□□□□□ -2.13
VPS16YPL045W YEL045CP32616 141 aa1.77□□□□□ -2.13
VPS16YPL045W BDH1P39714 382 aa1.77□□□□□ -2.13
VPS16YPL045W SDT1P53078 280 aa1.77□□□□□ -2.13
VPS16YPL045W PRM8P53174 237 aa1.77□□□□□ -2.13
VPS16YPL045W JAC1P53193 184 aa1.77□□□□□ -2.13
VPS16YPL045W YLR030WQ07967 263 aa1.77□□□□□ -2.13
VPS16YPL045W YOL160WQ08321 113 aa1.77□□□□□ -2.13
VPS16YPL045W TMC1Q08422 150 aaPredicted RBP1.77□□□□□ -2.13
VPS16YPL045W SLD7Q08457 257 aa1.77□□□□□ -2.13
VPS16YPL045W IGO2Q9P305 131 aa1.77□□□□□ -2.13
VPS16YPL045W YLR462WO13556 202 aa1.77□□□□□ -2.13
VPS16YPL045W GRX2P17695 143 aaKnown RBP1.77□□□□□ -2.13
VPS16YPL045W TAH1P25638 111 aaPredicted RBP1.77□□□□□ -2.13
VPS16YPL045W ACP1P32463 125 aa1.77□□□□□ -2.13
VPS16YPL045W YPT52P36018 234 aaKnown RBP1.77□□□□□ -2.13
VPS16YPL045W MSA2P36157 363 aa1.77□□□□□ -2.13
VPS16YPL045W TRM7P38238 310 aaKnown RBP1.77□□□□□ -2.13
VPS16YPL045W YEL075CP39972 122 aa1.77□□□□□ -2.13
VPS16YPL045W MEP2P41948 499 aa1.77□□□□□ -2.13
VPS16YPL045W TMA22P47089 198 aaPredicted RBP1.77□□□□□ -2.13
VPS16YPL045W MDM34P53083 459 aa1.77□□□□□ -2.13
VPS16YPL045W RTC4P53850 401 aa1.77□□□□□ -2.13
VPS16YPL045W LSM7P53905 115 aaKnown RBP1.77□□□□□ -2.13
VPS16YPL045W GGA1Q06336 557 aa1.77□□□□□ -2.13
VPS16YPL045W YOL024WQ08172 172 aa1.77□□□□□ -2.13
VPS16YPL045W YHR214C-EQ8TGK0 99 aa1.77□□□□□ -2.13
VPS16YPL045W YEL009C-AA0A023PZF2 135 aa1.76□□□□□ -2.13
VPS16YPL045W TOM40P23644 387 aaKnown RBP1.76□□□□□ -2.13
VPS16YPL045W PCL1P24867 279 aa1.76□□□□□ -2.13
VPS16YPL045W TCA17P32613 152 aa1.76□□□□□ -2.13
VPS16YPL045W SFC1P33303 322 aa1.76□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms