RNA–Protein interactions for RNA: YOR075W

UFE1, Transcript of t-SNARE protein required for retrograde vesicular traffic, yeastyeast

Gene UFE1, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFE1YOR075W YET1P35723 206 aa1.78□□□□□ -2.12
UFE1YOR075W UMP1P38293 148 aa1.78□□□□□ -2.12
UFE1YOR075W MIC12P38341 106 aa1.78□□□□□ -2.12
UFE1YOR075W NUP49Q02199 472 aa1.78□□□□□ -2.12
UFE1YOR075W SWP1Q02795 286 aa1.78□□□□□ -2.12
UFE1YOR075W TSC3Q3E790 80 aa1.78□□□□□ -2.12
UFE1YOR075W SEY1Q99287 776 aa1.78□□□□□ -2.12
UFE1YOR075W RPL2AP0CX45 254 aaKnown RBP1.77□□□□□ -2.13
UFE1YOR075W RPL2BP0CX46 254 aaKnown RBP1.77□□□□□ -2.13
UFE1YOR075W PPA2P28239 310 aa1.77□□□□□ -2.13
UFE1YOR075W TCA17P32613 152 aa1.77□□□□□ -2.13
UFE1YOR075W APS1P35181 156 aa1.77□□□□□ -2.13
UFE1YOR075W UPS2P35200 230 aa1.77□□□□□ -2.13
UFE1YOR075W RTR1P40084 226 aaPredicted RBP1.77□□□□□ -2.13
UFE1YOR075W BXI1P48558 297 aa1.77□□□□□ -2.13
UFE1YOR075W ALG13P53178 202 aa1.77□□□□□ -2.13
UFE1YOR075W TDA8Q6B2U8 126 aa1.77□□□□□ -2.13
UFE1YOR075W MET5P47169 1442 aa1.76□□□□□ -2.13
UFE1YOR075W DBF2P22204 572 aa1.76□□□□□ -2.13
UFE1YOR075W BMH2P34730 273 aaKnown RBP1.76□□□□□ -2.13
UFE1YOR075W TMA19P35691 167 aaKnown RBP1.76□□□□□ -2.13
UFE1YOR075W GAA1P39012 614 aa1.76□□□□□ -2.13
UFE1YOR075W YRB1P41920 201 aaKnown RBP1.76□□□□□ -2.13
UFE1YOR075W NUP57P48837 541 aa1.76□□□□□ -2.13
UFE1YOR075W RPL28P02406 149 aaKnown RBP1.75□□□□□ -2.13
UFE1YOR075W GPA2P10823 449 aa1.75□□□□□ -2.13
UFE1YOR075W SNC2P33328 115 aa1.75□□□□□ -2.13
UFE1YOR075W SKG1P36169 355 aa1.75□□□□□ -2.13
UFE1YOR075W MRPL17P36528 281 aa1.75□□□□□ -2.13
UFE1YOR075W RTC3P38804 111 aaPredicted RBP1.75□□□□□ -2.13
UFE1YOR075W OTU1P43558 301 aa1.75□□□□□ -2.13
UFE1YOR075W YNR077CP53758 84 aa1.75□□□□□ -2.13
UFE1YOR075W GAS3Q03655 524 aa1.75□□□□□ -2.13
UFE1YOR075W ANT1Q06497 328 aa1.75□□□□□ -2.13
UFE1YOR075W RIO1Q12196 484 aaKnown RBP1.75□□□□□ -2.13
UFE1YOR075W PDR18P53756 1333 aa1.74□□□□□ -2.13
UFE1YOR075W YBR121C-AP0C5L4 52 aa1.74□□□□□ -2.13
UFE1YOR075W SEC17P32602 292 aa1.74□□□□□ -2.13
UFE1YOR075W SIP3P38717 1229 aa1.74□□□□□ -2.13
UFE1YOR075W SAY1P53324 424 aa1.74□□□□□ -2.13
UFE1YOR075W TIM9O74700 87 aa1.73□□□□□ -2.13
UFE1YOR075W NHP6BP11633 99 aaKnown RBP1.73□□□□□ -2.13
UFE1YOR075W FSF1Q12029 327 aaKnown RBP1.73□□□□□ -2.13
UFE1YOR075W MCP1Q12106 302 aa1.73□□□□□ -2.13
UFE1YOR075W YKL183C-AQ3E765 70 aa1.73□□□□□ -2.13
UFE1YOR075W TUS1Q06412 1307 aa1.72□□□□□ -2.13
UFE1YOR075W TFC1P32367 649 aa1.72□□□□□ -2.13
UFE1YOR075W GVP36P40531 326 aaKnown RBP1.72□□□□□ -2.13
UFE1YOR075W MGA1P53050 456 aa1.72□□□□□ -2.13
UFE1YOR075W GPM2Q12008 311 aa1.72□□□□□ -2.13
UFE1YOR075W YPL162CQ12042 273 aa1.72□□□□□ -2.13
UFE1YOR075W JLP1Q12358 412 aa1.72□□□□□ -2.13
UFE1YOR075W NCB2Q92317 146 aa1.72□□□□□ -2.13
UFE1YOR075W SEC4P07560 215 aaKnown RBP1.71□□□□□ -2.14
UFE1YOR075W PBN1P25580 416 aa1.71□□□□□ -2.14
UFE1YOR075W PRX1P34227 261 aaKnown RBP1.71□□□□□ -2.14
UFE1YOR075W UTP30P36144 274 aaKnown RBP1.71□□□□□ -2.14
UFE1YOR075W TCD1P38756 429 aa1.71□□□□□ -2.14
UFE1YOR075W RMD6P39975 231 aa1.71□□□□□ -2.14
UFE1YOR075W ERG28P40030 148 aa1.71□□□□□ -2.14
UFE1YOR075W SHE2P36068 246 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14not detected
UFE1YOR075W YBR209WP38311 105 aa1.7□□□□□ -2.14
UFE1YOR075W ERJ5P43613 295 aaPredicted RBP1.7□□□□□ -2.14
UFE1YOR075W ADO1P47143 340 aaKnown RBP1.7□□□□□ -2.14
UFE1YOR075W ATG40Q99325 256 aa1.7□□□□□ -2.14
UFE1YOR075W QCR8P08525 94 aa1.69□□□□□ -2.14
UFE1YOR075W STE18P18852 110 aa1.69□□□□□ -2.14
UFE1YOR075W IDH1P28834 360 aaKnown RBP RIP-Chip data1.69□□□□□ -2.14not detected
UFE1YOR075W MGM101P32787 269 aaKnown RBP1.69□□□□□ -2.14
UFE1YOR075W YBR285WP38354 144 aa1.69□□□□□ -2.14
UFE1YOR075W AST2P39945 430 aaKnown RBP1.69□□□□□ -2.14
UFE1YOR075W YGR050CP53231 118 aa1.69□□□□□ -2.14
UFE1YOR075W CUS2P53830 285 aaPredicted RBP1.69□□□□□ -2.14
UFE1YOR075W POP3P53833 195 aaPredicted RBP1.69□□□□□ -2.14
UFE1YOR075W YDR249CQ03787 373 aa1.69□□□□□ -2.14
UFE1YOR075W UBR2Q07963 1872 aa1.69□□□□□ -2.14
UFE1YOR075W URA5P13298 226 aaKnown RBP1.68□□□□□ -2.14
UFE1YOR075W KSS1P14681 368 aa1.68□□□□□ -2.14
UFE1YOR075W GCN3P14741 305 aa1.68□□□□□ -2.14
UFE1YOR075W COQ1P18900 473 aa1.68□□□□□ -2.14
UFE1YOR075W BET1P22804 142 aa1.68□□□□□ -2.14
UFE1YOR075W YNL194CP40169 301 aa1.68□□□□□ -2.14
UFE1YOR075W MSS2P40990 351 aa1.68□□□□□ -2.14
UFE1YOR075W GCN20P43535 752 aaKnown RBP1.68□□□□□ -2.14
UFE1YOR075W IRC18P47056 224 aa1.68□□□□□ -2.14
UFE1YOR075W EAF6P47128 113 aa1.68□□□□□ -2.14
UFE1YOR075W PDR17P53844 350 aa1.68□□□□□ -2.14
UFE1YOR075W TVP38P36164 337 aa1.67□□□□□ -2.14
UFE1YOR075W RUD3Q12234 484 aaKnown RBP1.67□□□□□ -2.14
UFE1YOR075W MAG1P22134 296 aaKnown RBP1.66□□□□□ -2.14
UFE1YOR075W PTM1P32857 523 aa1.66□□□□□ -2.14
UFE1YOR075W PRP18P33411 251 aaPredicted RBP1.66□□□□□ -2.14
UFE1YOR075W CBT1P36038 271 aaPredicted RBP1.66□□□□□ -2.14
UFE1YOR075W RAD17P48581 401 aa1.66□□□□□ -2.14
UFE1YOR075W KNH1P50112 268 aa1.66□□□□□ -2.14
UFE1YOR075W MPA43P53583 542 aaPredicted RBP1.66□□□□□ -2.14
UFE1YOR075W YDL180WQ12301 547 aa1.66□□□□□ -2.14
UFE1YOR075W SIR2P06700 562 aa1.65□□□□□ -2.15
UFE1YOR075W CDC33P07260 213 aaKnown RBP1.65□□□□□ -2.15
UFE1YOR075W RPB3P16370 318 aaKnown RBP1.65□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 32.8 ms