RNA–Protein interactions for RNA: YNL209W

SSB2, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB2, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB2	YNL209W	DLS1	P40366	167 aa		4.1	□□□□□ -1.75
SSB2	YNL209W	BUD8	P41698	603 aa		4.1	□□□□□ -1.75
SSB2	YNL209W	BXI1	P48558	297 aa		4.1	□□□□□ -1.75
SSB2	YNL209W	TYW3	P53177	273 aa		4.1	□□□□□ -1.75
SSB2	YNL209W	PNC1	P53184	216 aa	Known RBP	4.1	□□□□□ -1.75
SSB2	YNL209W	YLR152C	P54072	576 aa		4.1	□□□□□ -1.75
SSB2	YNL209W	ATG21	Q02887	496 aa		4.1	□□□□□ -1.75
SSB2	YNL209W	SNO1	Q03144	224 aa		4.1	□□□□□ -1.75
SSB2	YNL209W	TRS23	Q03784	219 aa		4.1	□□□□□ -1.75
SSB2	YNL209W	YOR376W	Q08900	122 aa		4.1	□□□□□ -1.75
SSB2	YNL209W	RKI1	Q12189	258 aa		4.1	□□□□□ -1.75
SSB2	YNL209W	RDL1	Q12305	139 aa	Known RBP	4.1	□□□□□ -1.75
SSB2	YNL209W	AIM45	Q12480	344 aa	Known RBP	4.1	□□□□□ -1.75
SSB2	YNL209W	COX1	P00401	534 aa		4.09	□□□□□ -1.75
SSB2	YNL209W	CPR1	P14832	162 aa	Known RBP	4.09	□□□□□ -1.75
SSB2	YNL209W	ELO2	P25358	347 aa		4.09	□□□□□ -1.75
SSB2	YNL209W	PET18	P25362	215 aa		4.09	□□□□□ -1.75
SSB2	YNL209W	MRP17	P28778	131 aa		4.09	□□□□□ -1.75
SSB2	YNL209W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
SSB2	YNL209W	SRY1	P36007	326 aa		4.09	□□□□□ -1.75
SSB2	YNL209W	YPT53	P36019	220 aa		4.09	□□□□□ -1.75
SSB2	YNL209W	PAN3	P36102	679 aa	Predicted RBP	4.09	□□□□□ -1.75
SSB2	YNL209W	FRM2	P37261	193 aa		4.09	□□□□□ -1.75
SSB2	YNL209W	SHM2	P37291	469 aa	Known RBP	4.09	□□□□□ -1.75
SSB2	YNL209W	ERG28	P40030	148 aa		4.09	□□□□□ -1.75
SSB2	YNL209W	SYS1	P41544	203 aa		4.09	□□□□□ -1.75
SSB2	YNL209W	CUP9	P41817	306 aa		4.09	□□□□□ -1.75
SSB2	YNL209W	POP6	P53218	158 aa		4.09	□□□□□ -1.75
SSB2	YNL209W	APM1	Q00776	475 aa	Predicted RBP	4.09	□□□□□ -1.75
SSB2	YNL209W	YJR112W-A	Q3E743	109 aa		4.09	□□□□□ -1.75
SSB2	YNL209W	RPL27A	P0C2H6	136 aa	Known RBP	4.09	□□□□□ -1.76
SSB2	YNL209W	RPL27B	P0C2H7	136 aa	Known RBP	4.09	□□□□□ -1.76
SSB2	YNL209W	RPL31A	P0C2H8	113 aa	Known RBP	4.09	□□□□□ -1.76
SSB2	YNL209W	RPL31B	P0C2H9	113 aa	Known RBP	4.09	□□□□□ -1.76
SSB2	YNL209W	MAG1	P22134	296 aa	Known RBP	4.09	□□□□□ -1.76
SSB2	YNL209W	EHD3	P28817	500 aa		4.09	□□□□□ -1.76
SSB2	YNL209W	ISC10	P32645	267 aa		4.09	□□□□□ -1.76
SSB2	YNL209W	SNC2	P33328	115 aa		4.09	□□□□□ -1.76
SSB2	YNL209W	LAG1	P38703	411 aa		4.09	□□□□□ -1.76
SSB2	YNL209W	PGD1	P40356	397 aa		4.09	□□□□□ -1.76
SSB2	YNL209W	CDC40	P40968	455 aa	Predicted RBP	4.09	□□□□□ -1.76
SSB2	YNL209W	YCH1	P42937	148 aa		4.09	□□□□□ -1.76
SSB2	YNL209W	ERJ5	P43613	295 aa	Predicted RBP	4.09	□□□□□ -1.76
SSB2	YNL209W	YJR011C	P47086	261 aa	Predicted RBP	4.09	□□□□□ -1.76
SSB2	YNL209W	PHB2	P50085	310 aa		4.09	□□□□□ -1.76
SSB2	YNL209W	SBH2	P52871	88 aa		4.09	□□□□□ -1.76
SSB2	YNL209W	YGL185C	P53100	379 aa		4.09	□□□□□ -1.76
SSB2	YNL209W	SOK2	P53438	785 aa	Predicted RBP	4.09	□□□□□ -1.76
SSB2	YNL209W	MRPL22	P53881	309 aa		4.09	□□□□□ -1.76
SSB2	YNL209W	AAH1	P53909	347 aa		4.09	□□□□□ -1.76
SSB2	YNL209W	SKO1	Q02100	647 aa		4.09	□□□□□ -1.76
SSB2	YNL209W	MIX14	Q04341	121 aa		4.09	□□□□□ -1.76
SSB2	YNL209W	YMR253C	Q04835	414 aa		4.09	□□□□□ -1.76
SSB2	YNL209W	DPP1	Q05521	289 aa		4.09	□□□□□ -1.76
SSB2	YNL209W	PAM18	Q07914	168 aa		4.09	□□□□□ -1.76
SSB2	YNL209W	SRL2	Q12020	392 aa		4.09	□□□□□ -1.76
SSB2	YNL209W	YHR214C-E	Q8TGK0	99 aa		4.09	□□□□□ -1.76
SSB2	YNL209W	MSW1	P04803	379 aa		4.08	□□□□□ -1.76
SSB2	YNL209W	CDC26	P14724	124 aa		4.08	□□□□□ -1.76
SSB2	YNL209W	FUN14	P18411	198 aa		4.08	□□□□□ -1.76
SSB2	YNL209W	DAL82	P21705	255 aa		4.08	□□□□□ -1.76
SSB2	YNL209W	YCR061W	P25639	631 aa		4.08	□□□□□ -1.76
SSB2	YNL209W	TIP1	P27654	210 aa	Predicted RBP	4.08	□□□□□ -1.76
SSB2	YNL209W	SUA7	P29055	345 aa	Predicted RBP	4.08	□□□□□ -1.76
SSB2	YNL209W	MRP20	P32387	263 aa		4.08	□□□□□ -1.76
SSB2	YNL209W	AGA2	P32781	87 aa		4.08	□□□□□ -1.76
SSB2	YNL209W	MRPL36	P36531	177 aa		4.08	□□□□□ -1.76
SSB2	YNL209W	UMP1	P38293	148 aa		4.08	□□□□□ -1.76
SSB2	YNL209W	YPC1	P38298	316 aa		4.08	□□□□□ -1.76
SSB2	YNL209W	PRS3	P38689	320 aa	Known RBP	4.08	□□□□□ -1.76
SSB2	YNL209W	POG1	P40473	351 aa		4.08	□□□□□ -1.76
SSB2	YNL209W	AVT7	P40501	490 aa		4.08	□□□□□ -1.76
SSB2	YNL209W	REE1	P40893	198 aa		4.08	□□□□□ -1.76
SSB2	YNL209W	TAX4	P47030	604 aa		4.08	□□□□□ -1.76
SSB2	YNL209W	TAD2	P47058	250 aa		4.08	□□□□□ -1.76
SSB2	YNL209W	PGU1	P47180	361 aa		4.08	□□□□□ -1.76
SSB2	YNL209W	MTM1	P53320	366 aa		4.08	□□□□□ -1.76
SSB2	YNL209W	SCW4	P53334	386 aa	Known RBP	4.08	□□□□□ -1.76
SSB2	YNL209W	NRG1	Q03125	231 aa		4.08	□□□□□ -1.76
SSB2	YNL209W	CGI121	Q03705	181 aa	Known RBP	4.08	□□□□□ -1.76
SSB2	YNL209W	HOF1	Q05080	669 aa		4.08	□□□□□ -1.76
SSB2	YNL209W	ATG39	Q06159	398 aa		4.08	□□□□□ -1.76
SSB2	YNL209W	TRM13	Q12383	476 aa		4.08	□□□□□ -1.76
SSB2	YNL209W	EAF3	Q12432	401 aa		4.08	□□□□□ -1.76
SSB2	YNL209W	HFA1	P32874	2273 aa		4.08	□□□□□ -1.76
SSB2	YNL209W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
SSB2	YNL209W	TPI1	P00942	248 aa	Known RBP	4.07	□□□□□ -1.76
SSB2	YNL209W	CHO1	P08456	276 aa		4.07	□□□□□ -1.76
SSB2	YNL209W	YHR214C-D	P0CX93	97 aa		4.07	□□□□□ -1.76
SSB2	YNL209W	HEM13	P11353	328 aa	Known RBP	4.07	□□□□□ -1.76
SSB2	YNL209W	SAG1	P20840	650 aa		4.07	□□□□□ -1.76
SSB2	YNL209W	OLE1	P21147	510 aa	Known RBP	4.07	□□□□□ -1.76
SSB2	YNL209W	MDH2	P22133	377 aa		4.07	□□□□□ -1.76
SSB2	YNL209W	YBR197C	P38306	217 aa		4.07	□□□□□ -1.76
SSB2	YNL209W	GPI16	P38875	610 aa		4.07	□□□□□ -1.76
SSB2	YNL209W	PTI1	P39927	425 aa	Predicted RBP	4.07	□□□□□ -1.76
SSB2	YNL209W	YHC3	P47040	408 aa		4.07	□□□□□ -1.76
SSB2	YNL209W	UBP8	P50102	471 aa		4.07	□□□□□ -1.76
SSB2	YNL209W	BOR1	P53838	576 aa		4.07	□□□□□ -1.76
SSB2	YNL209W	RNH201	P53942	307 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms