RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C TOS2P50078 622 aa0.65□□□□□ -2.31
RKR1YMR247C MRPS17Q03246 237 aaPredicted RBP0.65□□□□□ -2.31
RKR1YMR247C YDR248CQ03786 193 aa0.65□□□□□ -2.31
RKR1YMR247C RRP17Q04031 235 aaPredicted RBP0.65□□□□□ -2.31
RKR1YMR247C YNG1Q08465 219 aa0.65□□□□□ -2.31
RKR1YMR247C REX3Q12090 404 aa0.65□□□□□ -2.31
RKR1YMR247C SPO24Q3E752 67 aa0.65□□□□□ -2.31
RKR1YMR247C COX2P00410 251 aa0.65□□□□□ -2.31
RKR1YMR247C MSW1P04803 379 aa0.65□□□□□ -2.31
RKR1YMR247C CDC36P06100 191 aaPredicted RBP0.65□□□□□ -2.31
RKR1YMR247C YGL010WP25338 174 aa0.65□□□□□ -2.31
RKR1YMR247C HOM6P31116 359 aaKnown RBP0.65□□□□□ -2.31
RKR1YMR247C GDH2P33327 1092 aaKnown RBP0.65□□□□□ -2.31
RKR1YMR247C DOG2P38773 246 aa0.65□□□□□ -2.31
RKR1YMR247C RPF1P38805 295 aaKnown RBP0.65□□□□□ -2.31
RKR1YMR247C YHR177WP38867 453 aa0.65□□□□□ -2.31
RKR1YMR247C RPL13BP40212 199 aaKnown RBP0.65□□□□□ -2.31
RKR1YMR247C NAS2P40555 220 aa0.65□□□□□ -2.31
RKR1YMR247C RPC17P47076 161 aa0.65□□□□□ -2.31
RKR1YMR247C TOS8P53147 276 aa0.65□□□□□ -2.31
RKR1YMR247C PLP1Q04004 230 aa0.65□□□□□ -2.31
RKR1YMR247C ANT1Q06497 328 aa0.65□□□□□ -2.31
RKR1YMR247C SDO1Q07953 250 aaKnown RBP0.65□□□□□ -2.31
RKR1YMR247C YLR030WQ07967 263 aa0.65□□□□□ -2.31
RKR1YMR247C YOL029CQ08187 201 aa0.65□□□□□ -2.31
RKR1YMR247C GPM2Q12008 311 aa0.65□□□□□ -2.31
RKR1YMR247C RPL13AQ12690 199 aaPredicted RBP0.65□□□□□ -2.31
RKR1YMR247C PPQ1P32945 549 aa0.64□□□□□ -2.31
RKR1YMR247C YOR062CP36025 268 aa0.64□□□□□ -2.31
RKR1YMR247C MAL32P38158 584 aa0.64□□□□□ -2.31
RKR1YMR247C ERV15P38312 142 aa0.64□□□□□ -2.31
RKR1YMR247C YHL042WP38729 150 aa0.64□□□□□ -2.31
RKR1YMR247C YMR144WP40214 342 aaKnown RBP0.64□□□□□ -2.31
RKR1YMR247C BMT5P40493 336 aa0.64□□□□□ -2.31
RKR1YMR247C CGR1P53188 120 aa0.64□□□□□ -2.31
RKR1YMR247C JAC1P53193 184 aa0.64□□□□□ -2.31
RKR1YMR247C LSB1P53281 241 aa0.64□□□□□ -2.31
RKR1YMR247C MAL12P53341 584 aa0.64□□□□□ -2.31
RKR1YMR247C VBA1Q04301 562 aa0.64□□□□□ -2.31
RKR1YMR247C SPG4Q04438 115 aa0.64□□□□□ -2.31
RKR1YMR247C YPR098CQ06089 161 aa0.64□□□□□ -2.31
RKR1YMR247C YLR031WQ07978 186 aa0.64□□□□□ -2.31
RKR1YMR247C FSF1Q12029 327 aaKnown RBP0.64□□□□□ -2.31
RKR1YMR247C YOR114WQ12219 294 aa0.64□□□□□ -2.31
RKR1YMR247C JIP3O13555 125 aa0.64□□□□□ -2.31
RKR1YMR247C KRE1P17260 313 aa0.64□□□□□ -2.31
RKR1YMR247C PRE7P23724 241 aaKnown RBP0.64□□□□□ -2.31
RKR1YMR247C MRPL28P36527 147 aa0.64□□□□□ -2.31
RKR1YMR247C HEK2P38199 381 aaKnown RBP RIP-Chip data0.64□□□□□ -2.31 RIP-Chip
RKR1YMR247C YPC1P38298 316 aa0.64□□□□□ -2.31
RKR1YMR247C POP4P38336 279 aa0.64□□□□□ -2.31
RKR1YMR247C BFR1P38934 470 aaKnown RBP RIP-Chip data0.64□□□□□ -2.31not detected
RKR1YMR247C SNZ3P43545 298 aa0.64□□□□□ -2.31
RKR1YMR247C RIB4P50861 169 aaPredicted RBP0.64□□□□□ -2.31
RKR1YMR247C SNZ2P53824 298 aa0.64□□□□□ -2.31
RKR1YMR247C RHO3Q00245 231 aaKnown RBP0.64□□□□□ -2.31
RKR1YMR247C YDR209CQ03480 137 aa0.64□□□□□ -2.31
RKR1YMR247C YDR222WQ04925 415 aa0.64□□□□□ -2.31
RKR1YMR247C GEP5Q12393 293 aa0.64□□□□□ -2.31
RKR1YMR247C YPL247CQ12523 523 aa0.64□□□□□ -2.31
RKR1YMR247C CPA1P07258 411 aaKnown RBP0.64□□□□□ -2.31
RKR1YMR247C URA5P13298 226 aaKnown RBP0.64□□□□□ -2.31
RKR1YMR247C TOM40P23644 387 aaKnown RBP0.64□□□□□ -2.31
RKR1YMR247C SPT4P32914 102 aaPredicted RBP0.64□□□□□ -2.31
RKR1YMR247C RIB7P33312 244 aa0.64□□□□□ -2.31
RKR1YMR247C UTP11P34247 250 aaPredicted RBP0.64□□□□□ -2.31
RKR1YMR247C NRG2P38082 220 aa0.64□□□□□ -2.31
RKR1YMR247C YHR127WP38833 243 aaKnown RBP0.64□□□□□ -2.31
RKR1YMR247C AIM20P40451 204 aa0.64□□□□□ -2.31
RKR1YMR247C TPC1P53257 314 aa0.64□□□□□ -2.31
RKR1YMR247C CUE4Q04201 117 aaPredicted RBP0.64□□□□□ -2.31
RKR1YMR247C PBP4Q07362 185 aaKnown RBP0.64□□□□□ -2.31
RKR1YMR247C PAM18Q07914 168 aa0.64□□□□□ -2.31
RKR1YMR247C VPS68Q12016 184 aa0.64□□□□□ -2.31
RKR1YMR247C MSN4P33749 630 aa0.64□□□□□ -2.31
RKR1YMR247C YUH1P35127 236 aa0.64□□□□□ -2.31
RKR1YMR247C YET1P35723 206 aa0.64□□□□□ -2.31
RKR1YMR247C GPX1P36014 167 aa0.64□□□□□ -2.31
RKR1YMR247C YRA2P36036 203 aaKnown RBP RIP-Chip data0.64□□□□□ -2.31not detected
RKR1YMR247C YKL162CP36052 402 aa0.64□□□□□ -2.31
RKR1YMR247C YBR285WP38354 144 aa0.64□□□□□ -2.31
RKR1YMR247C YHR022CP38763 256 aa0.64□□□□□ -2.31
RKR1YMR247C RFC4P40339 323 aaKnown RBP0.64□□□□□ -2.31
RKR1YMR247C CAB4P53332 305 aa0.64□□□□□ -2.31
RKR1YMR247C APJ1P53940 528 aa0.64□□□□□ -2.31
RKR1YMR247C YMR295CQ03559 197 aa0.64□□□□□ -2.31
RKR1YMR247C DCR2Q05924 578 aa0.64□□□□□ -2.31
RKR1YMR247C KAP95Q06142 861 aaKnown RBP0.64□□□□□ -2.31
RKR1YMR247C YOR268CQ08734 132 aa0.64□□□□□ -2.31
RKR1YMR247C FMP16Q12497 93 aa0.64□□□□□ -2.31
RKR1YMR247C IPP1P00817 287 aaKnown RBP0.63□□□□□ -2.31
RKR1YMR247C RPO26P20435 155 aa0.63□□□□□ -2.31
RKR1YMR247C HSP30P25619 332 aa0.63□□□□□ -2.31
RKR1YMR247C RPB9P27999 122 aa0.63□□□□□ -2.31
RKR1YMR247C PRX1P34227 261 aaKnown RBP0.63□□□□□ -2.31
RKR1YMR247C YAR068WP39564 161 aa0.63□□□□□ -2.31
RKR1YMR247C AIM2P39721 246 aa0.63□□□□□ -2.31
RKR1YMR247C GIM4P40005 111 aaKnown RBP0.63□□□□□ -2.31
RKR1YMR247C RTR1P40084 226 aaPredicted RBP0.63□□□□□ -2.31
RKR1YMR247C FMP32P43557 207 aa0.63□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 53.8 ms