RNA–Protein interactions for RNA: YMR159C

ATG16, Transcript of Conserved protein involved in autophagy, yeastyeast

Gene ATG16, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG16YMR159C DRS2P39524 1355 aa1.97□□□□□ -2.09
ATG16YMR159C FLO9P39712 1322 aa1.96□□□□□ -2.1
ATG16YMR159C FPR1P20081 114 aaKnown RBP1.96□□□□□ -2.1
ATG16YMR159C DBF2P22204 572 aa1.96□□□□□ -2.1
ATG16YMR159C TCA17P32613 152 aa1.96□□□□□ -2.1
ATG16YMR159C YET1P35723 206 aa1.96□□□□□ -2.1
ATG16YMR159C BXI1P48558 297 aa1.96□□□□□ -2.1
ATG16YMR159C NUP57P48837 541 aa1.96□□□□□ -2.1
ATG16YMR159C TSC3Q3E790 80 aa1.96□□□□□ -2.1
ATG16YMR159C SEY1Q99287 776 aa1.96□□□□□ -2.1
ATG16YMR159C RPL2AP0CX45 254 aaKnown RBP1.95□□□□□ -2.1
ATG16YMR159C RPL2BP0CX46 254 aaKnown RBP1.95□□□□□ -2.1
ATG16YMR159C PPA2P28239 310 aa1.95□□□□□ -2.1
ATG16YMR159C APS1P35181 156 aa1.95□□□□□ -2.1
ATG16YMR159C TMA19P35691 167 aaKnown RBP1.95□□□□□ -2.1
ATG16YMR159C MIC12P38341 106 aa1.95□□□□□ -2.1
ATG16YMR159C YRB1P41920 201 aaKnown RBP1.95□□□□□ -2.1
ATG16YMR159C OTU1P43558 301 aa1.95□□□□□ -2.1
ATG16YMR159C ALG13P53178 202 aa1.95□□□□□ -2.1
ATG16YMR159C NUP49Q02199 472 aa1.95□□□□□ -2.1
ATG16YMR159C TDA8Q6B2U8 126 aa1.95□□□□□ -2.1
ATG16YMR159C YBR121C-AP0C5L4 52 aa1.94□□□□□ -2.1
ATG16YMR159C SEC17P32602 292 aa1.94□□□□□ -2.1
ATG16YMR159C SNC2P33328 115 aa1.94□□□□□ -2.1
ATG16YMR159C MRPL17P36528 281 aa1.94□□□□□ -2.1
ATG16YMR159C BMH2P34730 273 aaKnown RBP1.93□□□□□ -2.1
ATG16YMR159C SKG1P36169 355 aa1.93□□□□□ -2.1
ATG16YMR159C SIP3P38717 1229 aa1.93□□□□□ -2.1
ATG16YMR159C RTC3P38804 111 aaPredicted RBP1.93□□□□□ -2.1
ATG16YMR159C GAA1P39012 614 aa1.93□□□□□ -2.1
ATG16YMR159C RTR1P40084 226 aaPredicted RBP1.93□□□□□ -2.1
ATG16YMR159C ANT1Q06497 328 aa1.93□□□□□ -2.1
ATG16YMR159C FSF1Q12029 327 aaKnown RBP1.93□□□□□ -2.1
ATG16YMR159C NCB2Q92317 146 aa1.93□□□□□ -2.1
ATG16YMR159C RPL28P02406 149 aaKnown RBP1.92□□□□□ -2.1
ATG16YMR159C MCP1Q12106 302 aa1.92□□□□□ -2.1
ATG16YMR159C RIO1Q12196 484 aaKnown RBP1.92□□□□□ -2.1
ATG16YMR159C YKL183C-AQ3E765 70 aa1.92□□□□□ -2.1
ATG16YMR159C TIM9O74700 87 aa1.91□□□□□ -2.1
ATG16YMR159C GPA2P10823 449 aa1.91□□□□□ -2.1
ATG16YMR159C PBN1P25580 416 aa1.91□□□□□ -2.1
ATG16YMR159C GVP36P40531 326 aaKnown RBP1.91□□□□□ -2.1
ATG16YMR159C MGA1P53050 456 aa1.91□□□□□ -2.1
ATG16YMR159C SAY1P53324 424 aa1.91□□□□□ -2.1
ATG16YMR159C YNR077CP53758 84 aa1.91□□□□□ -2.1
ATG16YMR159C GAS3Q03655 524 aa1.91□□□□□ -2.1
ATG16YMR159C GPM2Q12008 311 aa1.91□□□□□ -2.1
ATG16YMR159C PDR18P53756 1333 aa1.91□□□□□ -2.1
ATG16YMR159C SEC4P07560 215 aaKnown RBP1.9□□□□□ -2.11
ATG16YMR159C NHP6BP11633 99 aaKnown RBP1.9□□□□□ -2.11
ATG16YMR159C TFC1P32367 649 aa1.9□□□□□ -2.11
ATG16YMR159C PRX1P34227 261 aaKnown RBP1.9□□□□□ -2.11
ATG16YMR159C YBR209WP38311 105 aa1.9□□□□□ -2.11
ATG16YMR159C GCN20P43535 752 aaKnown RBP1.9□□□□□ -2.11
ATG16YMR159C IRC18P47056 224 aa1.9□□□□□ -2.11
ATG16YMR159C POP3P53833 195 aaPredicted RBP1.9□□□□□ -2.11
ATG16YMR159C JLP1Q12358 412 aa1.9□□□□□ -2.11
ATG16YMR159C IDH1P28834 360 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11not detected
ATG16YMR159C SHE2P36068 246 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11not detected
ATG16YMR159C UTP30P36144 274 aaKnown RBP1.89□□□□□ -2.11
ATG16YMR159C ERG28P40030 148 aa1.89□□□□□ -2.11
ATG16YMR159C YGR050CP53231 118 aa1.89□□□□□ -2.11
ATG16YMR159C MET5P47169 1442 aa1.89□□□□□ -2.11
ATG16YMR159C GCN3P14741 305 aa1.88□□□□□ -2.11
ATG16YMR159C TCD1P38756 429 aa1.88□□□□□ -2.11
ATG16YMR159C CUS2P53830 285 aaPredicted RBP1.88□□□□□ -2.11
ATG16YMR159C PDR17P53844 350 aa1.88□□□□□ -2.11
ATG16YMR159C YDR249CQ03787 373 aa1.88□□□□□ -2.11
ATG16YMR159C RUD3Q12234 484 aaKnown RBP1.88□□□□□ -2.11
ATG16YMR159C ATG40Q99325 256 aa1.88□□□□□ -2.11
ATG16YMR159C URA5P13298 226 aaKnown RBP1.87□□□□□ -2.11
ATG16YMR159C KSS1P14681 368 aa1.87□□□□□ -2.11
ATG16YMR159C RMD6P39975 231 aa1.87□□□□□ -2.11
ATG16YMR159C MSS2P40990 351 aa1.87□□□□□ -2.11
ATG16YMR159C ERJ5P43613 295 aaPredicted RBP1.87□□□□□ -2.11
ATG16YMR159C ADO1P47143 340 aaKnown RBP1.87□□□□□ -2.11
ATG16YMR159C YPL162CQ12042 273 aa1.87□□□□□ -2.11
ATG16YMR159C TUS1Q06412 1307 aa1.87□□□□□ -2.11
ATG16YMR159C YBR285WP38354 144 aa1.86□□□□□ -2.11
ATG16YMR159C UBR2Q07963 1872 aa1.86□□□□□ -2.11
ATG16YMR159C QCR8P08525 94 aa1.85□□□□□ -2.11
ATG16YMR159C STE18P18852 110 aa1.85□□□□□ -2.11
ATG16YMR159C COQ1P18900 473 aa1.85□□□□□ -2.11
ATG16YMR159C BET1P22804 142 aa1.85□□□□□ -2.11
ATG16YMR159C MGM101P32787 269 aaKnown RBP1.85□□□□□ -2.11
ATG16YMR159C RAD17P48581 401 aa1.85□□□□□ -2.11
ATG16YMR159C KNH1P50112 268 aa1.85□□□□□ -2.11
ATG16YMR159C PTM1P32857 523 aa1.84□□□□□ -2.11
ATG16YMR159C PRP18P33411 251 aaPredicted RBP1.84□□□□□ -2.11
ATG16YMR159C CBT1P36038 271 aaPredicted RBP1.84□□□□□ -2.11
ATG16YMR159C AST2P39945 430 aaKnown RBP1.84□□□□□ -2.11
ATG16YMR159C YNL194CP40169 301 aa1.84□□□□□ -2.11
ATG16YMR159C EAF6P47128 113 aa1.84□□□□□ -2.11
ATG16YMR159C COG5P53951 403 aa1.84□□□□□ -2.11
ATG16YMR159C YDL180WQ12301 547 aa1.84□□□□□ -2.11
ATG16YMR159C CDC33P07260 213 aaKnown RBP1.83□□□□□ -2.12
ATG16YMR159C RPB3P16370 318 aaKnown RBP1.83□□□□□ -2.12
ATG16YMR159C MAG1P22134 296 aaKnown RBP1.83□□□□□ -2.12
ATG16YMR159C LSM7P53905 115 aaKnown RBP1.83□□□□□ -2.12
ATG16YMR159C PET191Q02772 108 aa1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 43.8 ms