RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W RPL25P04456 142 aaKnown RBP3.29□□□□□ -1.88
USA1YML029W RAD52P06778 471 aaKnown RBP3.29□□□□□ -1.88
USA1YML029W GDH1P07262 454 aaKnown RBP3.29□□□□□ -1.88
USA1YML029W CKA1P15790 372 aa3.29□□□□□ -1.88
USA1YML029W SEN2P16658 377 aa3.29□□□□□ -1.88
USA1YML029W FUS3P16892 353 aaKnown RBP3.29□□□□□ -1.88
USA1YML029W TRR1P29509 319 aaKnown RBP3.29□□□□□ -1.88
USA1YML029W IES6P32617 166 aa3.29□□□□□ -1.88
USA1YML029W YBL010CP32788 280 aa3.29□□□□□ -1.88
USA1YML029W VAM7P32912 316 aa3.29□□□□□ -1.88
USA1YML029W SOR1P35497 357 aaKnown RBP3.29□□□□□ -1.88
USA1YML029W MRPL27P36526 146 aaPredicted RBP3.29□□□□□ -1.88
USA1YML029W ECM31P38122 312 aa3.29□□□□□ -1.88
USA1YML029W ALG14P38242 237 aa3.29□□□□□ -1.88
USA1YML029W YPC1P38298 316 aa3.29□□□□□ -1.88
USA1YML029W LAG1P38703 411 aa3.29□□□□□ -1.88
USA1YML029W FLX1P40464 311 aa3.29□□□□□ -1.88
USA1YML029W QRI1P43123 477 aaKnown RBP3.29□□□□□ -1.88
USA1YML029W RSM27P53305 110 aa3.29□□□□□ -1.88
USA1YML029W YNR071CP53757 342 aa3.29□□□□□ -1.88
USA1YML029W VBA1Q04301 562 aa3.29□□□□□ -1.88
USA1YML029W STP4Q07351 490 aa3.29□□□□□ -1.88
USA1YML029W SOR2Q07786 357 aa3.29□□□□□ -1.88
USA1YML029W RDI1Q12434 202 aa3.29□□□□□ -1.88
USA1YML029W SPS100P13130 326 aa3.28□□□□□ -1.88
USA1YML029W MSI1P13712 422 aa3.28□□□□□ -1.88
USA1YML029W SAR1P20606 190 aaKnown RBP3.28□□□□□ -1.88
USA1YML029W YKL063CP35725 167 aa3.28□□□□□ -1.88
USA1YML029W NTC20P38302 140 aaPredicted RBP3.28□□□□□ -1.88
USA1YML029W RPL13BP40212 199 aaKnown RBP3.28□□□□□ -1.88
USA1YML029W SOL1P50278 321 aa3.28□□□□□ -1.88
USA1YML029W PEF1P53238 335 aa3.28□□□□□ -1.88
USA1YML029W YPL077CQ02831 240 aa3.28□□□□□ -1.88
USA1YML029W ASM4Q05166 528 aa3.28□□□□□ -1.88
USA1YML029W YTH1Q06102 208 aaPredicted RBP3.28□□□□□ -1.88
USA1YML029W RPL13AQ12690 199 aaPredicted RBP3.28□□□□□ -1.88
USA1YML029W YLR365WQ7LIF2 110 aa3.28□□□□□ -1.88
USA1YML029W ATG40Q99325 256 aa3.28□□□□□ -1.88
USA1YML029W RFA1P22336 621 aaKnown RBP3.28□□□□□ -1.88
USA1YML029W SUA7P29055 345 aaPredicted RBP3.28□□□□□ -1.88
USA1YML029W SPS18P32572 300 aa3.28□□□□□ -1.88
USA1YML029W FMT1P32785 401 aa3.28□□□□□ -1.88
USA1YML029W YKL187CP34231 750 aa3.28□□□□□ -1.88
USA1YML029W YER121WP40076 114 aa3.28□□□□□ -1.88
USA1YML029W YER137CP40083 148 aaKnown RBP3.28□□□□□ -1.88
USA1YML029W YIR020CP40575 100 aa3.28□□□□□ -1.88
USA1YML029W OKP1P53298 406 aa3.28□□□□□ -1.88
USA1YML029W YOR186WQ08560 144 aa3.28□□□□□ -1.88
USA1YML029W RNH203Q12338 110 aa3.28□□□□□ -1.88
USA1YML029W HUT1Q12520 339 aa3.28□□□□□ -1.88
USA1YML029W Q0297Q9ZZV8 51 aa3.28□□□□□ -1.88
USA1YML029W YER145C-AA0A023PYF4 145 aa3.27□□□□□ -1.89
USA1YML029W GRX2P17695 143 aaKnown RBP3.27□□□□□ -1.89
USA1YML029W ATP10P18496 279 aa3.27□□□□□ -1.89
USA1YML029W AGA2P32781 87 aa3.27□□□□□ -1.89
USA1YML029W GAT2P40209 560 aa3.27□□□□□ -1.89
USA1YML029W SLM1P40485 686 aa3.27□□□□□ -1.89
USA1YML029W GLR1P41921 483 aaKnown RBP3.27□□□□□ -1.89
USA1YML029W GTF1P53260 183 aaPredicted RBP3.27□□□□□ -1.89
USA1YML029W ARG5,6Q01217 863 aa3.27□□□□□ -1.89
USA1YML029W DCS1Q06151 350 aa3.27□□□□□ -1.89
USA1YML029W FCY22Q12119 530 aa3.27□□□□□ -1.89
USA1YML029W BBP1Q12365 385 aa3.27□□□□□ -1.89
USA1YML029W GEP5Q12393 293 aa3.27□□□□□ -1.89
USA1YML029W MEC1P38111 2368 aa3.27□□□□□ -1.89
USA1YML029W RPP1AP05318 106 aaPredicted RBP3.27□□□□□ -1.89
USA1YML029W SRY1P36007 326 aa3.27□□□□□ -1.89
USA1YML029W UTP30P36144 274 aaKnown RBP3.27□□□□□ -1.89
USA1YML029W ECM14P38836 430 aa3.27□□□□□ -1.89
USA1YML029W RMD6P39975 231 aa3.27□□□□□ -1.89
USA1YML029W YER079WP40052 210 aaKnown RBP3.27□□□□□ -1.89
USA1YML029W NCA3P46955 337 aa3.27□□□□□ -1.89
USA1YML029W RPA34P47006 233 aaPredicted RBP3.27□□□□□ -1.89
USA1YML029W NGL2Q03264 515 aaKnown RBP3.27□□□□□ -1.89
USA1YML029W YML018CQ03730 393 aa3.27□□□□□ -1.89
USA1YML029W NOC4Q06512 552 aaPredicted RBP3.27□□□□□ -1.89
USA1YML029W SYM1Q06563 197 aa3.27□□□□□ -1.89
USA1YML029W YNG1Q08465 219 aa3.27□□□□□ -1.89
USA1YML029W MED4Q12343 284 aa3.27□□□□□ -1.89
USA1YML029W TRM13Q12383 476 aa3.27□□□□□ -1.89
USA1YML029W PET20Q99373 253 aa3.27□□□□□ -1.89
USA1YML029W YCL042WP25572 119 aa3.26□□□□□ -1.89
USA1YML029W YCR016WP25617 290 aaKnown RBP3.26□□□□□ -1.89
USA1YML029W DUO1P53168 247 aaKnown RBP3.26□□□□□ -1.89
USA1YML029W YNR064CP53750 290 aa3.26□□□□□ -1.89
USA1YML029W ADH6Q04894 360 aaKnown RBP3.26□□□□□ -1.89
USA1YML029W SCP1Q08873 200 aa3.26□□□□□ -1.89
USA1YML029W MPD1Q12404 318 aaKnown RBP3.26□□□□□ -1.89
USA1YML029W ISN1Q99312 450 aa3.26□□□□□ -1.89
USA1YML029W NUM1Q00402 2748 aa3.26□□□□□ -1.89
USA1YML029W REP2P03872 296 aa3.26□□□□□ -1.89
USA1YML029W PUT1P09368 476 aa3.26□□□□□ -1.89
USA1YML029W BGL2P15703 313 aaKnown RBP3.26□□□□□ -1.89
USA1YML029W STF2P16965 84 aa3.26□□□□□ -1.89
USA1YML029W LSB5P25369 354 aa3.26□□□□□ -1.89
USA1YML029W IMP1P28627 190 aa3.26□□□□□ -1.89
USA1YML029W MRP17P28778 131 aa3.26□□□□□ -1.89
USA1YML029W MRP20P32387 263 aa3.26□□□□□ -1.89
USA1YML029W PAN3P36102 679 aaPredicted RBP3.26□□□□□ -1.89
USA1YML029W FIG1P38224 298 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms