RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W REP2P03872 296 aa1.64□□□□□ -2.15
SMD2YLR275W YLR156WP0CE96 114 aa1.64□□□□□ -2.15
SMD2YLR275W YLR159WP0CE97 114 aa1.64□□□□□ -2.15
SMD2YLR275W YLR161WP0CE98 114 aa1.64□□□□□ -2.15
SMD2YLR275W RPB4P20433 221 aaPredicted RBP1.64□□□□□ -2.15
SMD2YLR275W SKG1P36169 355 aa1.64□□□□□ -2.15
SMD2YLR275W PGD1P40356 397 aa1.64□□□□□ -2.15
SMD2YLR275W RPL33BP41056 107 aaKnown RBP1.64□□□□□ -2.15
SMD2YLR275W IRC18P47056 224 aa1.64□□□□□ -2.15
SMD2YLR275W AIF1P52923 378 aa1.64□□□□□ -2.15
SMD2YLR275W YNR062CP53748 327 aa1.64□□□□□ -2.15
SMD2YLR275W GAS3Q03655 524 aa1.64□□□□□ -2.15
SMD2YLR275W GCN3P14741 305 aa1.63□□□□□ -2.15
SMD2YLR275W PET9P18239 318 aaKnown RBP1.63□□□□□ -2.15
SMD2YLR275W MRPS28P21771 286 aa1.63□□□□□ -2.15
SMD2YLR275W IDH1P28834 360 aaKnown RBP RIP-Chip data1.63□□□□□ -2.15not detected
SMD2YLR275W MEI4P29467 408 aa1.63□□□□□ -2.15
SMD2YLR275W MGM101P32787 269 aaKnown RBP1.63□□□□□ -2.15
SMD2YLR275W MRPL28P36527 147 aa1.63□□□□□ -2.15
SMD2YLR275W DSE2P38844 325 aa1.63□□□□□ -2.15
SMD2YLR275W VTC1P40046 129 aaRIP-Chip data1.63□□□□□ -2.15not detected
SMD2YLR275W YER135CP40082 130 aa1.63□□□□□ -2.15
SMD2YLR275W PDR17P53844 350 aa1.63□□□□□ -2.15
SMD2YLR275W SPG3Q04398 127 aaPredicted RBP1.63□□□□□ -2.15
SMD2YLR275W CDC36P06100 191 aaPredicted RBP1.62□□□□□ -2.15
SMD2YLR275W DDI2P0CH63 225 aa1.62□□□□□ -2.15
SMD2YLR275W DDI3P0CH64 225 aa1.62□□□□□ -2.15
SMD2YLR275W MDH2P22133 377 aa1.62□□□□□ -2.15
SMD2YLR275W TCA17P32613 152 aa1.62□□□□□ -2.15
SMD2YLR275W RMD6P39975 231 aa1.62□□□□□ -2.15
SMD2YLR275W ICE2P40499 491 aa1.62□□□□□ -2.15
SMD2YLR275W AGE2P40529 298 aa1.62□□□□□ -2.15
SMD2YLR275W TIR3P40552 269 aa1.62□□□□□ -2.15
SMD2YLR275W CWC21Q03375 135 aaKnown RBP1.62□□□□□ -2.15
SMD2YLR275W YOL162WP0CF19 215 aa1.61□□□□□ -2.15
SMD2YLR275W YKT6P36015 200 aaKnown RBP1.61□□□□□ -2.15
SMD2YLR275W SIP3P38717 1229 aa1.61□□□□□ -2.15
SMD2YLR275W SVP26P38869 228 aa1.61□□□□□ -2.15
SMD2YLR275W SWP1Q02795 286 aa1.61□□□□□ -2.15
SMD2YLR275W TSC3Q3E790 80 aa1.61□□□□□ -2.15
SMD2YLR275W SPS18P32572 300 aa1.6□□□□□ -2.15
SMD2YLR275W TAF14P35189 244 aa1.6□□□□□ -2.15
SMD2YLR275W IKI1P38874 309 aa1.6□□□□□ -2.15
SMD2YLR275W AST2P39945 430 aaKnown RBP1.6□□□□□ -2.15
SMD2YLR275W YRA1Q12159 226 aaKnown RBP1.6□□□□□ -2.15
SMD2YLR275W YHR214C-EQ8TGK0 99 aa1.6□□□□□ -2.15
SMD2YLR275W TUS1Q06412 1307 aa1.6□□□□□ -2.15
SMD2YLR275W TIM9O74700 87 aa1.59□□□□□ -2.15
SMD2YLR275W HTB1P02293 131 aaKnown RBP1.59□□□□□ -2.15
SMD2YLR275W HTB2P02294 131 aa1.59□□□□□ -2.15
SMD2YLR275W SEC4P07560 215 aaKnown RBP1.59□□□□□ -2.15
SMD2YLR275W RPL27BP0C2H7 136 aaKnown RBP1.59□□□□□ -2.15
SMD2YLR275W SEC17P32602 292 aa1.59□□□□□ -2.15
SMD2YLR275W PTM1P32857 523 aa1.59□□□□□ -2.15
SMD2YLR275W UTP30P36144 274 aaKnown RBP1.59□□□□□ -2.15
SMD2YLR275W MRPL17P36528 281 aa1.59□□□□□ -2.15
SMD2YLR275W TRM5P38793 499 aa1.59□□□□□ -2.15
SMD2YLR275W BOL2P53082 120 aa1.59□□□□□ -2.15
SMD2YLR275W CGR1P53188 120 aa1.59□□□□□ -2.15
SMD2YLR275W BUD25P85052 153 aa1.59□□□□□ -2.15
SMD2YLR275W YMR226CQ05016 267 aaKnown RBP1.59□□□□□ -2.15
SMD2YLR275W YPL162CQ12042 273 aa1.59□□□□□ -2.15
SMD2YLR275W MCP1Q12106 302 aa1.59□□□□□ -2.15
SMD2YLR275W MDM32Q12171 622 aa1.59□□□□□ -2.15
SMD2YLR275W RPL25P04456 142 aaKnown RBP1.58□□□□□ -2.16
SMD2YLR275W KSS1P14681 368 aa1.58□□□□□ -2.16
SMD2YLR275W RFA3P26755 122 aaKnown RBP1.58□□□□□ -2.16
SMD2YLR275W SNC2P33328 115 aa1.58□□□□□ -2.16
SMD2YLR275W YET1P35723 206 aa1.58□□□□□ -2.16
SMD2YLR275W YKR045CP36138 183 aa1.58□□□□□ -2.16
SMD2YLR275W YCR087C-AP37263 153 aa1.58□□□□□ -2.16
SMD2YLR275W UMP1P38293 148 aa1.58□□□□□ -2.16
SMD2YLR275W YNL217WP40152 326 aa1.58□□□□□ -2.16
SMD2YLR275W YRB2P40517 327 aa1.58□□□□□ -2.16
SMD2YLR275W DOC1P53068 250 aa1.58□□□□□ -2.16
SMD2YLR275W YGR050CP53231 118 aa1.58□□□□□ -2.16
SMD2YLR275W LSM7P53905 115 aaKnown RBP1.58□□□□□ -2.16
SMD2YLR275W PET191Q02772 108 aa1.58□□□□□ -2.16
SMD2YLR275W SML1Q04964 104 aa1.58□□□□□ -2.16
SMD2YLR275W MER1P16523 270 aa1.57□□□□□ -2.16
SMD2YLR275W CBF1P17106 351 aa1.57□□□□□ -2.16
SMD2YLR275W BET1P22804 142 aa1.57□□□□□ -2.16
SMD2YLR275W FZF1P32805 299 aa1.57□□□□□ -2.16
SMD2YLR275W AVT2P39981 480 aa1.57□□□□□ -2.16
SMD2YLR275W RFC4P40339 323 aaKnown RBP1.57□□□□□ -2.16
SMD2YLR275W CUS2P53830 285 aaPredicted RBP1.57□□□□□ -2.16
SMD2YLR275W MATALPHA2P0CY08 210 aa1.56□□□□□ -2.16
SMD2YLR275W HMLALPHA2P0CY09 210 aa1.56□□□□□ -2.16
SMD2YLR275W URA5P13298 226 aaKnown RBP1.56□□□□□ -2.16
SMD2YLR275W YBR219CP38317 127 aa1.56□□□□□ -2.16
SMD2YLR275W GVP36P40531 326 aaKnown RBP1.56□□□□□ -2.16
SMD2YLR275W EAF6P47128 113 aa1.56□□□□□ -2.16
SMD2YLR275W YNR077CP53758 84 aa1.56□□□□□ -2.16
SMD2YLR275W YDR249CQ03787 373 aa1.56□□□□□ -2.16
SMD2YLR275W YOL160WQ08321 113 aa1.56□□□□□ -2.16
SMD2YLR275W ADF1Q2V2Q1 113 aa1.56□□□□□ -2.16
SMD2YLR275W YFR032C-BQ8TGU2 87 aa1.56□□□□□ -2.16
SMD2YLR275W FLO9P39712 1322 aa1.56□□□□□ -2.16
SMD2YLR275W MAG1P22134 296 aaKnown RBP1.55□□□□□ -2.16
SMD2YLR275W COG5P53951 403 aa1.55□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 45.5 ms