RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W SNZ1Q03148 297 aa1.18□□□□□ -2.22
SEC22YLR268W ARG80P07249 177 aa1.17□□□□□ -2.22
SEC22YLR268W YLR156WP0CE96 114 aa1.17□□□□□ -2.22
SEC22YLR268W YLR159WP0CE97 114 aa1.17□□□□□ -2.22
SEC22YLR268W YLR161WP0CE98 114 aa1.17□□□□□ -2.22
SEC22YLR268W TCA17P32613 152 aa1.17□□□□□ -2.22
SEC22YLR268W RAD17P48581 401 aa1.17□□□□□ -2.22
SEC22YLR268W MGA1P53050 456 aa1.17□□□□□ -2.22
SEC22YLR268W BNA7Q04066 261 aa1.17□□□□□ -2.22
SEC22YLR268W SPG3Q04398 127 aaPredicted RBP1.17□□□□□ -2.22
SEC22YLR268W YDR157WA0A023PZE8 133 aa1.16□□□□□ -2.22
SEC22YLR268W CDC7P06243 507 aa1.16□□□□□ -2.22
SEC22YLR268W CDC33P07260 213 aaKnown RBP1.16□□□□□ -2.22
SEC22YLR268W MRPS28P21771 286 aa1.16□□□□□ -2.22
SEC22YLR268W NTG1P31378 399 aa1.16□□□□□ -2.22
SEC22YLR268W MGM101P32787 269 aaKnown RBP1.16□□□□□ -2.22
SEC22YLR268W SKG1P36169 355 aa1.16□□□□□ -2.22
SEC22YLR268W SIP3P38717 1229 aa1.16□□□□□ -2.22
SEC22YLR268W ICE2P40499 491 aa1.16□□□□□ -2.22
SEC22YLR268W AGE2P40529 298 aa1.16□□□□□ -2.22
SEC22YLR268W TIR3P40552 269 aa1.16□□□□□ -2.22
SEC22YLR268W CWC23P52868 283 aaPredicted RBP1.16□□□□□ -2.22
SEC22YLR268W YNR062CP53748 327 aa1.16□□□□□ -2.22
SEC22YLR268W GAS3Q03655 524 aa1.16□□□□□ -2.22
SEC22YLR268W TDA8Q6B2U8 126 aa1.16□□□□□ -2.22
SEC22YLR268W GCN3P14741 305 aa1.15□□□□□ -2.23
SEC22YLR268W RPB4P20433 221 aaPredicted RBP1.15□□□□□ -2.23
SEC22YLR268W IDH1P28834 360 aaKnown RBP RIP-Chip data1.15□□□□□ -2.23not detected
SEC22YLR268W MRPL28P36527 147 aa1.15□□□□□ -2.23
SEC22YLR268W AST2P39945 430 aaKnown RBP1.15□□□□□ -2.23
SEC22YLR268W RMD6P39975 231 aa1.15□□□□□ -2.23
SEC22YLR268W AVT2P39981 480 aa1.15□□□□□ -2.23
SEC22YLR268W IRC18P47056 224 aa1.15□□□□□ -2.23
SEC22YLR268W BOL2P53082 120 aa1.15□□□□□ -2.23
SEC22YLR268W BUD25P85052 153 aa1.15□□□□□ -2.23
SEC22YLR268W SWP1Q02795 286 aa1.15□□□□□ -2.23
SEC22YLR268W SML1Q04964 104 aa1.15□□□□□ -2.23
SEC22YLR268W GIS3Q12418 502 aa1.15□□□□□ -2.23
SEC22YLR268W TSC3Q3E790 80 aa1.15□□□□□ -2.23
SEC22YLR268W SEC4P07560 215 aaKnown RBP1.14□□□□□ -2.23
SEC22YLR268W RPL27BP0C2H7 136 aaKnown RBP1.14□□□□□ -2.23
SEC22YLR268W FZF1P32805 299 aa1.14□□□□□ -2.23
SEC22YLR268W UTP30P36144 274 aaKnown RBP1.14□□□□□ -2.23
SEC22YLR268W MRPL17P36528 281 aa1.14□□□□□ -2.23
SEC22YLR268W UMP1P38293 148 aa1.14□□□□□ -2.23
SEC22YLR268W PDR17P53844 350 aa1.14□□□□□ -2.23
SEC22YLR268W YPL162CQ12042 273 aa1.14□□□□□ -2.23
SEC22YLR268W MCP1Q12106 302 aa1.14□□□□□ -2.23
SEC22YLR268W RPL25P04456 142 aaKnown RBP1.13□□□□□ -2.23
SEC22YLR268W YOL162WP0CF19 215 aa1.13□□□□□ -2.23
SEC22YLR268W MER1P16523 270 aa1.13□□□□□ -2.23
SEC22YLR268W BET1P22804 142 aa1.13□□□□□ -2.23
SEC22YLR268W SPS18P32572 300 aa1.13□□□□□ -2.23
SEC22YLR268W SEC17P32602 292 aa1.13□□□□□ -2.23
SEC22YLR268W PTM1P32857 523 aa1.13□□□□□ -2.23
SEC22YLR268W SNC2P33328 115 aa1.13□□□□□ -2.23
SEC22YLR268W TAF14P35189 244 aa1.13□□□□□ -2.23
SEC22YLR268W YET1P35723 206 aa1.13□□□□□ -2.23
SEC22YLR268W YBR219CP38317 127 aa1.13□□□□□ -2.23
SEC22YLR268W IKI1P38874 309 aa1.13□□□□□ -2.23
SEC22YLR268W YNL217WP40152 326 aa1.13□□□□□ -2.23
SEC22YLR268W YRB2P40517 327 aa1.13□□□□□ -2.23
SEC22YLR268W DOC1P53068 250 aa1.13□□□□□ -2.23
SEC22YLR268W YNR077CP53758 84 aa1.13□□□□□ -2.23
SEC22YLR268W MET5P47169 1442 aa1.13□□□□□ -2.23
SEC22YLR268W TUS1Q06412 1307 aa1.13□□□□□ -2.23
SEC22YLR268W YIL177CP40434 1758 aa1.12□□□□□ -2.23
SEC22YLR268W YJL225CP40889 1758 aa1.12□□□□□ -2.23
SEC22YLR268W TIM9O74700 87 aa1.12□□□□□ -2.23
SEC22YLR268W HTB1P02293 131 aaKnown RBP1.12□□□□□ -2.23
SEC22YLR268W HTB2P02294 131 aa1.12□□□□□ -2.23
SEC22YLR268W KSS1P14681 368 aa1.12□□□□□ -2.23
SEC22YLR268W MAG1P22134 296 aaKnown RBP1.12□□□□□ -2.23
SEC22YLR268W YCR087C-AP37263 153 aa1.12□□□□□ -2.23
SEC22YLR268W TRM5P38793 499 aa1.12□□□□□ -2.23
SEC22YLR268W YER135CP40082 130 aa1.12□□□□□ -2.23
SEC22YLR268W GVP36P40531 326 aaKnown RBP1.12□□□□□ -2.23
SEC22YLR268W YGR050CP53231 118 aa1.12□□□□□ -2.23
SEC22YLR268W LSM7P53905 115 aaKnown RBP1.12□□□□□ -2.23
SEC22YLR268W YDR249CQ03787 373 aa1.12□□□□□ -2.23
SEC22YLR268W MDM32Q12171 622 aa1.12□□□□□ -2.23
SEC22YLR268W YHR214C-EQ8TGK0 99 aa1.12□□□□□ -2.23
SEC22YLR268W PDR18P53756 1333 aa1.12□□□□□ -2.23
SEC22YLR268W CDC36P06100 191 aaPredicted RBP1.11□□□□□ -2.23
SEC22YLR268W URA5P13298 226 aaKnown RBP1.11□□□□□ -2.23
SEC22YLR268W RFA3P26755 122 aaKnown RBP1.11□□□□□ -2.23
SEC22YLR268W YKT6P36015 200 aaKnown RBP1.11□□□□□ -2.23
SEC22YLR268W YKR045CP36138 183 aa1.11□□□□□ -2.23
SEC22YLR268W HMF1P40037 129 aaKnown RBP1.11□□□□□ -2.23
SEC22YLR268W RFC4P40339 323 aaKnown RBP1.11□□□□□ -2.23
SEC22YLR268W PET191Q02772 108 aa1.11□□□□□ -2.23
SEC22YLR268W CWC21Q03375 135 aaKnown RBP1.11□□□□□ -2.23
SEC22YLR268W YMR226CQ05016 267 aaKnown RBP1.11□□□□□ -2.23
SEC22YLR268W GPM2Q12008 311 aa1.11□□□□□ -2.23
SEC22YLR268W YRA1Q12159 226 aaKnown RBP1.11□□□□□ -2.23
SEC22YLR268W FLO9P39712 1322 aa1.11□□□□□ -2.23
SEC22YLR268W RPB3P16370 318 aaKnown RBP1.1□□□□□ -2.23
SEC22YLR268W YBR285WP38354 144 aa1.1□□□□□ -2.23
SEC22YLR268W GAA1P39012 614 aa1.1□□□□□ -2.23
SEC22YLR268W EAF6P47128 113 aa1.1□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms