RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W CHA1P25379 360 aaKnown RBP2.01□□□□□ -2.09
HRD3YLR207W TRR1P29509 319 aaKnown RBP2.01□□□□□ -2.09
HRD3YLR207W SPS18P32572 300 aa2.01□□□□□ -2.09
HRD3YLR207W UTH1P36135 365 aa2.01□□□□□ -2.09
HRD3YLR207W MRPL3P36516 390 aa2.01□□□□□ -2.09
HRD3YLR207W PDX3P38075 228 aaKnown RBP2.01□□□□□ -2.09
HRD3YLR207W YBR096WP38256 230 aa2.01□□□□□ -2.09
HRD3YLR207W LSM12P38828 187 aaKnown RBP2.01□□□□□ -2.09
HRD3YLR207W PTH1P38876 190 aaKnown RBP2.01□□□□□ -2.09
HRD3YLR207W APQ12P40532 138 aa2.01□□□□□ -2.09
HRD3YLR207W YGR015CP53208 328 aa2.01□□□□□ -2.09
HRD3YLR207W YNL140CP53910 189 aa2.01□□□□□ -2.09
HRD3YLR207W MMT2Q08970 484 aa2.01□□□□□ -2.09
HRD3YLR207W YPL278CQ08990 100 aa2.01□□□□□ -2.09
HRD3YLR207W FOL3Q12676 427 aaPredicted RBP2.01□□□□□ -2.09
HRD3YLR207W FAS1P07149 2051 aaKnown RBP2.01□□□□□ -2.09
HRD3YLR207W GIT1P25346 518 aa2.01□□□□□ -2.09
HRD3YLR207W SFC1P33303 322 aa2.01□□□□□ -2.09
HRD3YLR207W YOX1P34161 385 aa2.01□□□□□ -2.09
HRD3YLR207W MED8P38304 223 aa2.01□□□□□ -2.09
HRD3YLR207W RCK1P38622 512 aa2.01□□□□□ -2.09
HRD3YLR207W YER121WP40076 114 aa2.01□□□□□ -2.09
HRD3YLR207W GAB1P41733 394 aa2.01□□□□□ -2.09
HRD3YLR207W YJR056CP47115 236 aa2.01□□□□□ -2.09
HRD3YLR207W YJR141WP47172 347 aaPredicted RBP2.01□□□□□ -2.09
HRD3YLR207W COS10P52924 374 aa2.01□□□□□ -2.09
HRD3YLR207W MDM34P53083 459 aa2.01□□□□□ -2.09
HRD3YLR207W YNR066CP53752 436 aa2.01□□□□□ -2.09
HRD3YLR207W TPS1Q00764 495 aaKnown RBP2.01□□□□□ -2.09
HRD3YLR207W SNO1Q03144 224 aa2.01□□□□□ -2.09
HRD3YLR207W SCS7Q03529 384 aa2.01□□□□□ -2.09
HRD3YLR207W RPS28BP0C0X0 67 aaKnown RBP2□□□□□ -2.09
HRD3YLR207W MRPL17P36528 281 aa2□□□□□ -2.09
HRD3YLR207W YCR087C-AP37263 153 aa2□□□□□ -2.09
HRD3YLR207W GOS1P38736 223 aa2□□□□□ -2.09
HRD3YLR207W SEN34P39707 275 aa2□□□□□ -2.09
HRD3YLR207W AIM2P39721 246 aa2□□□□□ -2.09
HRD3YLR207W YIL067CP40514 678 aa2□□□□□ -2.09
HRD3YLR207W YKE4P40544 346 aa2□□□□□ -2.09
HRD3YLR207W TPC1P53257 314 aa2□□□□□ -2.09
HRD3YLR207W YMR166CQ03829 368 aa2□□□□□ -2.09
HRD3YLR207W SPG4Q04438 115 aa2□□□□□ -2.09
HRD3YLR207W SPC2Q04969 178 aa2□□□□□ -2.09
HRD3YLR207W RPS28AQ3E7X9 67 aaPredicted RBP2□□□□□ -2.09
HRD3YLR207W SPT3P06844 337 aa2□□□□□ -2.09
HRD3YLR207W IMP1P28627 190 aa2□□□□□ -2.09
HRD3YLR207W SEC17P32602 292 aa2□□□□□ -2.09
HRD3YLR207W FMP46P36141 133 aaKnown RBP2□□□□□ -2.09
HRD3YLR207W POP7P38291 140 aa2□□□□□ -2.09
HRD3YLR207W RGI1P40043 161 aaPredicted RBP2□□□□□ -2.09
HRD3YLR207W SOK1P40317 901 aa2□□□□□ -2.09
HRD3YLR207W EGT2P42835 1041 aa2□□□□□ -2.09
HRD3YLR207W BLM10P43583 2143 aa2□□□□□ -2.09
HRD3YLR207W YJR085CP47131 105 aaKnown RBP2□□□□□ -2.09
HRD3YLR207W YGL235WP53071 178 aa2□□□□□ -2.09
HRD3YLR207W RCF2P53721 224 aa2□□□□□ -2.09
HRD3YLR207W SLM2P53955 656 aa2□□□□□ -2.09
HRD3YLR207W PBA1Q05778 276 aa2□□□□□ -2.09
HRD3YLR207W COQ10Q08058 207 aa2□□□□□ -2.09
HRD3YLR207W RRP40Q08285 240 aaKnown RBP2□□□□□ -2.09
HRD3YLR207W TPO4Q12256 659 aa2□□□□□ -2.09
HRD3YLR207W SEC16P48415 2195 aaKnown RBP2□□□□□ -2.09
HRD3YLR207W DBF2P22204 572 aa1.99□□□□□ -2.09
HRD3YLR207W RNA14P25298 677 aaKnown RBP1.99□□□□□ -2.09
HRD3YLR207W YBL059WP34224 193 aa1.99□□□□□ -2.09
HRD3YLR207W SRP102P36057 244 aaPredicted RBP1.99□□□□□ -2.09
HRD3YLR207W YKL075CP36083 450 aa1.99□□□□□ -2.09
HRD3YLR207W CHL4P38907 458 aa1.99□□□□□ -2.09
HRD3YLR207W AVT7P40501 490 aa1.99□□□□□ -2.09
HRD3YLR207W MCM22P47167 239 aa1.99□□□□□ -2.09
HRD3YLR207W SBH2P52871 88 aa1.99□□□□□ -2.09
HRD3YLR207W MIG2P53035 382 aa1.99□□□□□ -2.09
HRD3YLR207W CRH1P53301 507 aa1.99□□□□□ -2.09
HRD3YLR207W PDR17P53844 350 aa1.99□□□□□ -2.09
HRD3YLR207W YLR460CP54007 376 aa1.99□□□□□ -2.09
HRD3YLR207W YML122CQ03207 126 aa1.99□□□□□ -2.09
HRD3YLR207W ADD37Q03233 198 aa1.99□□□□□ -2.09
HRD3YLR207W UTP15Q04305 513 aaKnown RBP1.99□□□□□ -2.09
HRD3YLR207W DYN3Q04949 312 aa1.99□□□□□ -2.09
HRD3YLR207W YLR036CQ07986 203 aa1.99□□□□□ -2.09
HRD3YLR207W YOL131WQ08270 108 aa1.99□□□□□ -2.09
HRD3YLR207W YNG1Q08465 219 aa1.99□□□□□ -2.09
HRD3YLR207W YOR292CQ08743 309 aa1.99□□□□□ -2.09
HRD3YLR207W SFM1Q12314 213 aa1.99□□□□□ -2.09
HRD3YLR207W YKL018C-AQ3E7A7 99 aa1.99□□□□□ -2.09
HRD3YLR207W BGL2P15703 313 aaKnown RBP1.99□□□□□ -2.09
HRD3YLR207W RPB5P20434 215 aa1.99□□□□□ -2.09
HRD3YLR207W GPX1P36014 167 aa1.99□□□□□ -2.09
HRD3YLR207W PRY2P36110 329 aa1.99□□□□□ -2.09
HRD3YLR207W COG3P40094 801 aa1.99□□□□□ -2.09
HRD3YLR207W STB1P42845 420 aa1.99□□□□□ -2.09
HRD3YLR207W LSM1P47017 172 aaKnown RBP1.99□□□□□ -2.09
HRD3YLR207W OST3P48439 350 aa1.99□□□□□ -2.09
HRD3YLR207W BXI1P48558 297 aa1.99□□□□□ -2.09
HRD3YLR207W SDT1P53078 280 aa1.99□□□□□ -2.09
HRD3YLR207W SYF2P53277 215 aaPredicted RBP1.99□□□□□ -2.09
HRD3YLR207W PRP38Q00723 242 aaPredicted RBP1.99□□□□□ -2.09
HRD3YLR207W FMN1Q03778 218 aa1.99□□□□□ -2.09
HRD3YLR207W YDR124WQ04608 324 aa1.99□□□□□ -2.09
HRD3YLR207W SEI1Q06058 285 aa1.99□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms