RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C SLM6P38343 150 aa5.11□□□□□ -1.59
SSK1YLR006C SHO1P40073 367 aa5.11□□□□□ -1.59
SSK1YLR006C MOB1P40484 314 aa5.11□□□□□ -1.59
SSK1YLR006C VHT1P53241 593 aa5.11□□□□□ -1.59
SSK1YLR006C MPA43P53583 542 aaPredicted RBP5.11□□□□□ -1.59
SSK1YLR006C YNL184CP53876 108 aa5.11□□□□□ -1.59
SSK1YLR006C AIM34Q03673 198 aa5.11□□□□□ -1.59
SSK1YLR006C YDL211CQ12121 372 aa5.11□□□□□ -1.59
SSK1YLR006C DCN1Q12395 269 aa5.11□□□□□ -1.59
SSK1YLR006C FSH3Q99369 266 aa5.11□□□□□ -1.59
SSK1YLR006C SPS4P09937 338 aa5.11□□□□□ -1.59
SSK1YLR006C CNE1P27825 502 aa5.11□□□□□ -1.59
SSK1YLR006C PMT2P31382 759 aa5.11□□□□□ -1.59
SSK1YLR006C KTI12P34253 313 aaKnown RBP5.11□□□□□ -1.59
SSK1YLR006C YPS6P40583 537 aa5.11□□□□□ -1.59
SSK1YLR006C ATG27P46989 271 aa5.11□□□□□ -1.59
SSK1YLR006C GTF1P53260 183 aaPredicted RBP5.11□□□□□ -1.59
SSK1YLR006C YNR062CP53748 327 aa5.11□□□□□ -1.59
SSK1YLR006C SAE3P89114 91 aa5.11□□□□□ -1.59
SSK1YLR006C TDA6Q06466 467 aa5.11□□□□□ -1.59
SSK1YLR006C MMT2Q08970 484 aa5.11□□□□□ -1.59
SSK1YLR006C ALG6Q12001 544 aaKnown RBP5.11□□□□□ -1.59
SSK1YLR006C EAF3Q12432 401 aa5.11□□□□□ -1.59
SSK1YLR006C RPB8P20436 146 aa5.1□□□□□ -1.59
SSK1YLR006C ERG24P32462 438 aaKnown RBP5.1□□□□□ -1.59
SSK1YLR006C PPZ2P33329 710 aa5.1□□□□□ -1.59
SSK1YLR006C ECM15P35195 104 aa5.1□□□□□ -1.59
SSK1YLR006C SFK1P35735 353 aa5.1□□□□□ -1.59
SSK1YLR006C TAD2P47058 250 aa5.1□□□□□ -1.59
SSK1YLR006C MNN10P50108 393 aaKnown RBP5.1□□□□□ -1.59
SSK1YLR006C ERG13P54839 491 aaKnown RBP5.1□□□□□ -1.59
SSK1YLR006C ZEO1Q08245 113 aa5.1□□□□□ -1.59
SSK1YLR006C FEN2P25621 512 aaKnown RBP5.09□□□□□ -1.59
SSK1YLR006C FUN19P28003 413 aaPredicted RBP5.09□□□□□ -1.59
SSK1YLR006C MIC26P50087 233 aa5.09□□□□□ -1.59
SSK1YLR006C MMS2P53152 137 aa5.09□□□□□ -1.59
SSK1YLR006C YGR045CP53229 120 aa5.09□□□□□ -1.59
SSK1YLR006C FHN1P53279 174 aa5.09□□□□□ -1.59
SSK1YLR006C SNU23Q12368 194 aaPredicted RBP5.09□□□□□ -1.59
SSK1YLR006C TRM13Q12383 476 aa5.09□□□□□ -1.59
SSK1YLR006C RAX2Q12465 1220 aa5.09□□□□□ -1.59
SSK1YLR006C DET1Q99288 334 aaKnown RBP5.09□□□□□ -1.59
SSK1YLR006C CCH1P50077 2039 aa5.09□□□□□ -1.59
SSK1YLR006C REP2P03872 296 aa5.09□□□□□ -1.59
SSK1YLR006C RPL12AP0CX53 165 aaKnown RBP5.09□□□□□ -1.59
SSK1YLR006C RPL12BP0CX54 165 aa5.09□□□□□ -1.59
SSK1YLR006C SRB6P32570 121 aa5.09□□□□□ -1.59
SSK1YLR006C LAG1P38703 411 aa5.09□□□□□ -1.59
SSK1YLR006C NSG1P38837 291 aa5.09□□□□□ -1.59
SSK1YLR006C YIL067CP40514 678 aa5.09□□□□□ -1.59
SSK1YLR006C IDP2P41939 412 aa5.09□□□□□ -1.59
SSK1YLR006C SNN1P48232 102 aa5.09□□□□□ -1.59
SSK1YLR006C SOK2P53438 785 aaPredicted RBP5.09□□□□□ -1.59
SSK1YLR006C HOF1Q05080 669 aa5.09□□□□□ -1.59
SSK1YLR006C BER1Q06688 274 aaKnown RBP5.09□□□□□ -1.59
SSK1YLR006C NAG1Q8TGN9 163 aa5.09□□□□□ -1.59
SSK1YLR006C MDM35O60200 86 aa5.08□□□□□ -1.6
SSK1YLR006C IPP1P00817 287 aaKnown RBP5.08□□□□□ -1.6
SSK1YLR006C PHO2P07269 559 aa5.08□□□□□ -1.6
SSK1YLR006C CPR3P25719 182 aa5.08□□□□□ -1.6
SSK1YLR006C SUA7P29055 345 aaPredicted RBP5.08□□□□□ -1.6
SSK1YLR006C DCG1P32460 244 aa5.08□□□□□ -1.6
SSK1YLR006C SOR1P35497 357 aaKnown RBP5.08□□□□□ -1.6
SSK1YLR006C OAR1P35731 278 aa5.08□□□□□ -1.6
SSK1YLR006C ECM31P38122 312 aa5.08□□□□□ -1.6
SSK1YLR006C COS8P38723 381 aa5.08□□□□□ -1.6
SSK1YLR006C MCM22P47167 239 aa5.08□□□□□ -1.6
SSK1YLR006C UBC11P52492 156 aa5.08□□□□□ -1.6
SSK1YLR006C RSM27P53305 110 aa5.08□□□□□ -1.6
SSK1YLR006C HCH1P53834 153 aa5.08□□□□□ -1.6
SSK1YLR006C YMR166CQ03829 368 aa5.08□□□□□ -1.6
SSK1YLR006C YMR320WQ04897 101 aa5.08□□□□□ -1.6
SSK1YLR006C SOR2Q07786 357 aa5.08□□□□□ -1.6
SSK1YLR006C FRE7Q12333 620 aa5.08□□□□□ -1.6
SSK1YLR006C YOP1Q12402 180 aa5.08□□□□□ -1.6
SSK1YLR006C PRM4Q12498 284 aa5.08□□□□□ -1.6
SSK1YLR006C TPI1P00942 248 aaKnown RBP5.08□□□□□ -1.6
SSK1YLR006C COX9P07255 59 aa5.08□□□□□ -1.6
SSK1YLR006C RNQ1P25367 405 aa5.08□□□□□ -1.6
SSK1YLR006C BUB3P26449 341 aa5.08□□□□□ -1.6
SSK1YLR006C TIM12P32830 109 aa5.08□□□□□ -1.6
SSK1YLR006C YOR062CP36025 268 aa5.08□□□□□ -1.6
SSK1YLR006C KAE1P36132 386 aa5.08□□□□□ -1.6
SSK1YLR006C TRR2P38816 342 aa5.08□□□□□ -1.6
SSK1YLR006C YJL016WP47072 561 aa5.08□□□□□ -1.6
SSK1YLR006C TPC1P53257 314 aa5.08□□□□□ -1.6
SSK1YLR006C BUD25P85052 153 aa5.08□□□□□ -1.6
SSK1YLR006C ARC18Q05933 178 aaKnown RBP5.08□□□□□ -1.6
SSK1YLR006C ANT1Q06497 328 aa5.08□□□□□ -1.6
SSK1YLR006C YLR050CQ12155 161 aaKnown RBP5.08□□□□□ -1.6
SSK1YLR006C NCE102Q12207 173 aaRIP-Chip data5.08□□□□□ -1.6not detected
SSK1YLR006C OPI3P05375 206 aa5.07□□□□□ -1.6
SSK1YLR006C TIP1P27654 210 aaPredicted RBP5.07□□□□□ -1.6
SSK1YLR006C POP5P28005 173 aa5.07□□□□□ -1.6
SSK1YLR006C REC114P32841 428 aa5.07□□□□□ -1.6
SSK1YLR006C YBR096WP38256 230 aa5.07□□□□□ -1.6
SSK1YLR006C GLR1P41921 483 aaKnown RBP5.07□□□□□ -1.6
SSK1YLR006C YGR017WP53210 297 aa5.07□□□□□ -1.6
SSK1YLR006C UBC7Q02159 165 aa5.07□□□□□ -1.6
SSK1YLR006C NPC2Q12408 173 aa5.07□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms