RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C TY1A-ML2P0CX76 440 aa2.07□□□□□ -2.08
VPS13YLL040C TY1A-JR2P47099 440 aa2.07□□□□□ -2.08
VPS13YLL040C YGL117WP53133 265 aa2.07□□□□□ -2.08
VPS13YLL040C YMR166CQ03829 368 aa2.07□□□□□ -2.08
VPS13YLL040C TY1A-DR1Q03856 440 aa2.07□□□□□ -2.08
VPS13YLL040C TY1A-ML1Q04706 440 aaKnown RBP2.07□□□□□ -2.08
VPS13YLL040C YOR292CQ08743 309 aa2.07□□□□□ -2.08
VPS13YLL040C ATX2Q12067 313 aa2.07□□□□□ -2.08
VPS13YLL040C TY1A-GR1Q12085 440 aa2.07□□□□□ -2.08
VPS13YLL040C TY1A-DR3Q12441 440 aa2.07□□□□□ -2.08
VPS13YLL040C TY1A-NL2Q12470 440 aa2.07□□□□□ -2.08
VPS13YLL040C TY1A-GR2Q12485 440 aa2.07□□□□□ -2.08
VPS13YLL040C TY1A-PR3Q6Q5H1 440 aaKnown RBP2.07□□□□□ -2.08
VPS13YLL040C TY1A-OLQ92392 440 aaKnown RBP2.07□□□□□ -2.08
VPS13YLL040C ADH2P00331 348 aaKnown RBP2.07□□□□□ -2.08
VPS13YLL040C HTB1P02293 131 aaKnown RBP2.07□□□□□ -2.08
VPS13YLL040C OCH1P31755 480 aa2.07□□□□□ -2.08
VPS13YLL040C ARO4P32449 370 aaKnown RBP2.07□□□□□ -2.08
VPS13YLL040C RPS26AP39938 119 aaKnown RBP2.07□□□□□ -2.08
VPS13YLL040C VNX1P42839 908 aa2.07□□□□□ -2.08
VPS13YLL040C DIG2Q03373 323 aaKnown RBP2.07□□□□□ -2.08
VPS13YLL040C TAD3Q9URQ3 322 aa2.07□□□□□ -2.08
VPS13YLL040C COX1P00401 534 aa2.07□□□□□ -2.08
VPS13YLL040C IDH2P28241 369 aaKnown RBP2.07□□□□□ -2.08
VPS13YLL040C FMP46P36141 133 aaKnown RBP2.07□□□□□ -2.08
VPS13YLL040C HSV2P50079 448 aaPredicted RBP2.07□□□□□ -2.08
VPS13YLL040C JAC1P53193 184 aa2.07□□□□□ -2.08
VPS13YLL040C YGR126WP53274 230 aa2.07□□□□□ -2.08
VPS13YLL040C YNR048WP53740 393 aa2.07□□□□□ -2.08
VPS13YLL040C CUZ1P53899 274 aa2.07□□□□□ -2.08
VPS13YLL040C CAB5Q03941 241 aa2.07□□□□□ -2.08
VPS13YLL040C TIM9O74700 87 aa2.07□□□□□ -2.08
VPS13YLL040C AGP1P25376 633 aa2.07□□□□□ -2.08
VPS13YLL040C UMP1P38293 148 aa2.07□□□□□ -2.08
VPS13YLL040C STS1P38637 319 aa2.07□□□□□ -2.08
VPS13YLL040C PFS1P38872 237 aa2.07□□□□□ -2.08
VPS13YLL040C COX16P47081 118 aa2.07□□□□□ -2.08
VPS13YLL040C MSY1P48527 492 aa2.07□□□□□ -2.08
VPS13YLL040C YAP1802P53309 568 aa2.07□□□□□ -2.08
VPS13YLL040C COX2P00410 251 aa2.07□□□□□ -2.08
VPS13YLL040C ARF2P19146 181 aaKnown RBP2.07□□□□□ -2.08
VPS13YLL040C SPT23P35210 1082 aa2.07□□□□□ -2.08
VPS13YLL040C RPB11P38902 120 aa2.07□□□□□ -2.08
VPS13YLL040C YIL152WP40455 235 aa2.07□□□□□ -2.08
VPS13YLL040C PMT3P47190 753 aa2.07□□□□□ -2.08
VPS13YLL040C TMA17Q12513 150 aa2.07□□□□□ -2.08
VPS13YLL040C YHR214C-EQ8TGK0 99 aa2.07□□□□□ -2.08
VPS13YLL040C Q0182Q9ZZW1 134 aa2.07□□□□□ -2.08
VPS13YLL040C NFS1P25374 497 aa2.06□□□□□ -2.08
VPS13YLL040C NIT3P49954 291 aa2.06□□□□□ -2.08
VPS13YLL040C TRP4P07285 380 aaPredicted RBP2.06□□□□□ -2.08
VPS13YLL040C RPS18AP0CX55 146 aaKnown RBP2.06□□□□□ -2.08
VPS13YLL040C RPS18BP0CX56 146 aaPredicted RBP2.06□□□□□ -2.08
VPS13YLL040C RNA15P25299 296 aaPredicted RBP2.06□□□□□ -2.08
VPS13YLL040C KRR1P25586 316 aaPredicted RBP2.06□□□□□ -2.08
VPS13YLL040C ATG15P25641 520 aa2.06□□□□□ -2.08
VPS13YLL040C RPB7P34087 171 aa2.06□□□□□ -2.08
VPS13YLL040C HXT16P47185 567 aa2.06□□□□□ -2.08
VPS13YLL040C YHM2Q04013 314 aa2.06□□□□□ -2.08
VPS13YLL040C PAL1Q05518 499 aaKnown RBP2.06□□□□□ -2.08
VPS13YLL040C LAS17Q12446 633 aa2.06□□□□□ -2.08
VPS13YLL040C YGL194C-AQ2V2P6 80 aa2.06□□□□□ -2.08
VPS13YLL040C HTB2P02294 131 aa2.06□□□□□ -2.08
VPS13YLL040C HIP1P06775 603 aa2.06□□□□□ -2.08
VPS13YLL040C RPL12AP0CX53 165 aaKnown RBP2.06□□□□□ -2.08
VPS13YLL040C RPL12BP0CX54 165 aa2.06□□□□□ -2.08
VPS13YLL040C CDH1P53197 566 aa2.06□□□□□ -2.08
VPS13YLL040C YGL258W-AQ3E740 77 aa2.06□□□□□ -2.08
VPS13YLL040C BOS1P25385 244 aa2.06□□□□□ -2.08
VPS13YLL040C EMP70P32802 667 aa2.06□□□□□ -2.08
VPS13YLL040C LOC1P43586 204 aaPredicted RBP2.06□□□□□ -2.08
VPS13YLL040C YJR120WP47157 116 aa2.06□□□□□ -2.08
VPS13YLL040C YIP5P53108 310 aa2.06□□□□□ -2.08
VPS13YLL040C YPL067CQ02754 198 aa2.06□□□□□ -2.08
VPS13YLL040C ATP10P18496 279 aa2.06□□□□□ -2.08
VPS13YLL040C FRM2P37261 193 aa2.06□□□□□ -2.08
VPS13YLL040C UBS1P38290 277 aa2.06□□□□□ -2.08
VPS13YLL040C NTC20P38302 140 aaPredicted RBP2.06□□□□□ -2.08
VPS13YLL040C SSH1P38353 490 aaKnown RBP2.06□□□□□ -2.08
VPS13YLL040C VMA21P41806 77 aa2.06□□□□□ -2.08
VPS13YLL040C MSO1P53604 210 aaKnown RBP2.06□□□□□ -2.08
VPS13YLL040C YMR254CQ04838 102 aa2.06□□□□□ -2.08
VPS13YLL040C PAM18Q07914 168 aa2.06□□□□□ -2.08
VPS13YLL040C HAA1Q12753 694 aaKnown RBP2.06□□□□□ -2.08
VPS13YLL040C TPI1P00942 248 aaKnown RBP2.06□□□□□ -2.08
VPS13YLL040C RPL1AP0CX43 217 aaKnown RBP2.06□□□□□ -2.08
VPS13YLL040C RPL1BP0CX44 217 aaKnown RBP2.06□□□□□ -2.08
VPS13YLL040C VEL1P53058 206 aa2.06□□□□□ -2.08
VPS13YLL040C ARR2Q06597 130 aa2.06□□□□□ -2.08
VPS13YLL040C TMS1Q12116 473 aa2.06□□□□□ -2.08
VPS13YLL040C EAF3Q12432 401 aa2.06□□□□□ -2.08
VPS13YLL040C ARO3P14843 370 aaKnown RBP2.06□□□□□ -2.08
VPS13YLL040C DEG1P31115 442 aaKnown RBP2.06□□□□□ -2.08
VPS13YLL040C HMX1P32339 317 aa2.06□□□□□ -2.08
VPS13YLL040C YBL059WP34224 193 aa2.06□□□□□ -2.08
VPS13YLL040C YER010CP40011 234 aa2.06□□□□□ -2.08
VPS13YLL040C SNO1Q03144 224 aa2.06□□□□□ -2.08
VPS13YLL040C OPI10Q08202 246 aa2.06□□□□□ -2.08
VPS13YLL040C YER190C-BP0CX94 160 aa2.05□□□□□ -2.08
VPS13YLL040C YEL077W-AP0CX95 160 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms