RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W AIM25P47140 327 aa3.5□□□□□ -1.85
SOF1YLL011W ABF2Q02486 183 aa3.5□□□□□ -1.85
SOF1YLL011W API2Q04413 109 aa3.5□□□□□ -1.85
SOF1YLL011W PAL1Q05518 499 aaKnown RBP3.5□□□□□ -1.85
SOF1YLL011W PPT2Q12036 173 aa3.5□□□□□ -1.85
SOF1YLL011W TIR4Q12218 487 aaPredicted RBP3.5□□□□□ -1.85
SOF1YLL011W TRM10Q12400 293 aa3.5□□□□□ -1.85
SOF1YLL011W RPS28AQ3E7X9 67 aaPredicted RBP3.5□□□□□ -1.85
SOF1YLL011W COS2P0CX12 379 aa3.49□□□□□ -1.85
SOF1YLL011W COS3P0CX13 379 aa3.49□□□□□ -1.85
SOF1YLL011W ERG2P32352 222 aa3.49□□□□□ -1.85
SOF1YLL011W POP7P38291 140 aa3.49□□□□□ -1.85
SOF1YLL011W ARN2P38724 620 aa3.49□□□□□ -1.85
SOF1YLL011W PDS1P40316 373 aaPredicted RBP3.49□□□□□ -1.85
SOF1YLL011W REE1P40893 198 aa3.49□□□□□ -1.85
SOF1YLL011W COS4P43542 379 aa3.49□□□□□ -1.85
SOF1YLL011W YPR011CQ12251 326 aa3.49□□□□□ -1.85
SOF1YLL011W YHR139C-AO13536 103 aa3.48□□□□□ -1.85
SOF1YLL011W BMH1P29311 267 aaKnown RBP3.48□□□□□ -1.85
SOF1YLL011W EDC2P40023 145 aaPredicted RBP3.48□□□□□ -1.85
SOF1YLL011W AVT6P40074 448 aa3.48□□□□□ -1.85
SOF1YLL011W PRM10P42946 383 aa3.48□□□□□ -1.85
SOF1YLL011W FAR7P43592 221 aa3.48□□□□□ -1.85
SOF1YLL011W ERV29P53337 310 aa3.48□□□□□ -1.85
SOF1YLL011W SWT21P53873 357 aaPredicted RBP3.48□□□□□ -1.85
SOF1YLL011W NUP49Q02199 472 aa3.48□□□□□ -1.85
SOF1YLL011W GGA1Q06336 557 aa3.48□□□□□ -1.85
SOF1YLL011W MDM32Q12171 622 aa3.48□□□□□ -1.85
SOF1YLL011W DUR1,2P32528 1835 aaKnown RBP3.48□□□□□ -1.85
SOF1YLL011W SEC4P07560 215 aaKnown RBP3.47□□□□□ -1.85
SOF1YLL011W GRX2P17695 143 aaKnown RBP3.47□□□□□ -1.85
SOF1YLL011W MGT1P26188 188 aa3.47□□□□□ -1.85
SOF1YLL011W TIP20P33891 701 aa3.47□□□□□ -1.85
SOF1YLL011W ZRT3P34240 503 aa3.47□□□□□ -1.85
SOF1YLL011W CLG1P35190 452 aa3.47□□□□□ -1.85
SOF1YLL011W SHE3P38272 425 aaKnown RBP3.47□□□□□ -1.85
SOF1YLL011W RRG9P40156 214 aa3.47□□□□□ -1.85
SOF1YLL011W IGD1P43598 195 aa3.47□□□□□ -1.85
SOF1YLL011W NQM1P53228 333 aaPredicted RBP3.47□□□□□ -1.85
SOF1YLL011W YLR179CQ06252 201 aaKnown RBP3.47□□□□□ -1.85
SOF1YLL011W YOL160WQ08321 113 aa3.47□□□□□ -1.85
SOF1YLL011W NSL1Q12143 216 aa3.47□□□□□ -1.85
SOF1YLL011W YLR050CQ12155 161 aaKnown RBP3.47□□□□□ -1.85
SOF1YLL011W YHR214C-EQ8TGK0 99 aa3.47□□□□□ -1.85
SOF1YLL011W SPT15P13393 240 aaKnown RBP3.47□□□□□ -1.85
SOF1YLL011W OM14P38325 134 aa3.47□□□□□ -1.85
SOF1YLL011W SSH1P38353 490 aaKnown RBP3.47□□□□□ -1.85
SOF1YLL011W EDC3P39998 551 aaKnown RBP3.47□□□□□ -1.85
SOF1YLL011W CAT5P41735 233 aa3.47□□□□□ -1.85
SOF1YLL011W LSM7P53905 115 aaKnown RBP3.47□□□□□ -1.85
SOF1YLL011W VHS1Q03785 461 aa3.47□□□□□ -1.85
SOF1YLL011W YOL029CQ08187 201 aa3.47□□□□□ -1.85
SOF1YLL011W IPP1P00817 287 aaKnown RBP3.46□□□□□ -1.86
SOF1YLL011W ARO2P28777 376 aaKnown RBP3.46□□□□□ -1.86
SOF1YLL011W PTM1P32857 523 aa3.46□□□□□ -1.86
SOF1YLL011W CSG2P35206 410 aa3.46□□□□□ -1.86
SOF1YLL011W RPE1P46969 238 aa3.46□□□□□ -1.86
SOF1YLL011W YGL262WP53054 175 aa3.46□□□□□ -1.86
SOF1YLL011W YNL184CP53876 108 aa3.46□□□□□ -1.86
SOF1YLL011W YPL039WQ03080 316 aa3.46□□□□□ -1.86
SOF1YLL011W EMI1Q04406 187 aa3.46□□□□□ -1.86
SOF1YLL011W YPR127WQ06494 345 aa3.46□□□□□ -1.86
SOF1YLL011W YLR053CQ12026 108 aa3.46□□□□□ -1.86
SOF1YLL011W YPS3Q12303 508 aa3.46□□□□□ -1.86
SOF1YLL011W EMP46Q12396 444 aa3.46□□□□□ -1.86
SOF1YLL011W YBR298C-AQ8TGK4 73 aa3.46□□□□□ -1.86
SOF1YLL011W RPS19AP07280 144 aaKnown RBP3.45□□□□□ -1.86
SOF1YLL011W RPS19BP07281 144 aaPredicted RBP3.45□□□□□ -1.86
SOF1YLL011W ARO7P32178 256 aa3.45□□□□□ -1.86
SOF1YLL011W SMP1P38128 452 aa3.45□□□□□ -1.86
SOF1YLL011W YHI9P38765 294 aa3.45□□□□□ -1.86
SOF1YLL011W GIM4P40005 111 aaKnown RBP3.45□□□□□ -1.86
SOF1YLL011W ILM1P47155 203 aa3.45□□□□□ -1.86
SOF1YLL011W FLC3P53121 802 aa3.45□□□□□ -1.86
SOF1YLL011W YGL118CP53132 145 aa3.45□□□□□ -1.86
SOF1YLL011W YLR030WQ07967 263 aa3.45□□□□□ -1.86
SOF1YLL011W TIM22Q12328 207 aa3.45□□□□□ -1.86
SOF1YLL011W PEX11Q12462 236 aa3.45□□□□□ -1.86
SOF1YLL011W YDR524C-BQ3E6R4 66 aa3.45□□□□□ -1.86
SOF1YLL011W LSO2Q3E772 92 aaKnown RBP3.45□□□□□ -1.86
SOF1YLL011W RPL25P04456 142 aaKnown RBP3.44□□□□□ -1.86
SOF1YLL011W MDH3P32419 343 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
SOF1YLL011W YBL081WP38180 368 aaKnown RBP3.44□□□□□ -1.86
SOF1YLL011W YHL044WP38727 235 aa3.44□□□□□ -1.86
SOF1YLL011W NVJ1P38881 321 aa3.44□□□□□ -1.86
SOF1YLL011W KRE9P39005 276 aa3.44□□□□□ -1.86
SOF1YLL011W YJL028WP47062 111 aa3.44□□□□□ -1.86
SOF1YLL011W UBC12P52491 188 aa3.44□□□□□ -1.86
SOF1YLL011W PRM8P53174 237 aa3.44□□□□□ -1.86
SOF1YLL011W YMR317WQ04893 1140 aa3.44□□□□□ -1.86
SOF1YLL011W RRG7Q08774 242 aaPredicted RBP3.44□□□□□ -1.86
SOF1YLL011W RDI1Q12434 202 aa3.44□□□□□ -1.86
SOF1YLL011W PET54P10834 293 aa3.43□□□□□ -1.86
SOF1YLL011W YCR090CP25654 182 aaKnown RBP3.43□□□□□ -1.86
SOF1YLL011W NUF2P33895 451 aa3.43□□□□□ -1.86
SOF1YLL011W DOG1P38774 246 aa3.43□□□□□ -1.86
SOF1YLL011W LSM4P40070 187 aaKnown RBP3.43□□□□□ -1.86
SOF1YLL011W COQ5P49017 307 aa3.43□□□□□ -1.86
SOF1YLL011W ACT1P60010 375 aaKnown RBP3.43□□□□□ -1.86
SOF1YLL011W NNT1Q05874 261 aa3.43□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 48.9 ms