RNA–Protein interactions for RNA: YKR017C

HEL1, Transcript of RING finger ubiquitin ligase (E3), yeastyeast

Gene HEL1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HEL1YKR017C PEP4P07267 405 aaKnown RBP6.19□□□□□ -1.42
HEL1YKR017C RIM1P32445 135 aaKnown RBP6.19□□□□□ -1.42
HEL1YKR017C SKN1P33336 771 aa6.19□□□□□ -1.42
HEL1YKR017C POP1P41812 875 aa6.19□□□□□ -1.42
HEL1YKR017C YNR071CP53757 342 aa6.19□□□□□ -1.42
HEL1YKR017C FMP41P53889 259 aaKnown RBP6.19□□□□□ -1.42
HEL1YKR017C HSK3P69852 69 aa6.19□□□□□ -1.42
HEL1YKR017C MRX11Q03079 207 aa6.19□□□□□ -1.42
HEL1YKR017C ECI1Q05871 280 aa6.19□□□□□ -1.42
HEL1YKR017C ARC18Q05933 178 aaKnown RBP6.19□□□□□ -1.42
HEL1YKR017C RDL2Q08742 149 aaKnown RBP6.19□□□□□ -1.42
HEL1YKR017C MMT2Q08970 484 aa6.19□□□□□ -1.42
HEL1YKR017C YPL245WQ12179 454 aaKnown RBP6.19□□□□□ -1.42
HEL1YKR017C MCT1Q12283 360 aa6.19□□□□□ -1.42
HEL1YKR017C PEX11Q12462 236 aa6.19□□□□□ -1.42
HEL1YKR017C ZPS1Q12512 249 aa6.19□□□□□ -1.42
HEL1YKR017C VMA9Q3E7B6 73 aa6.19□□□□□ -1.42
HEL1YKR017C MED11Q99278 115 aa6.19□□□□□ -1.42
HEL1YKR017C PBI2P0CT04 75 aaKnown RBP6.18□□□□□ -1.42
HEL1YKR017C UBC5P15732 148 aa6.18□□□□□ -1.42
HEL1YKR017C TIP1P27654 210 aaPredicted RBP6.18□□□□□ -1.42
HEL1YKR017C MRPL11P36521 249 aaPredicted RBP6.18□□□□□ -1.42
HEL1YKR017C LYS1P38998 373 aaRIP-Chip data6.18□□□□□ -1.42not detected
HEL1YKR017C SYS1P41544 203 aa6.18□□□□□ -1.42
HEL1YKR017C RPS10BP46784 105 aaKnown RBP6.18□□□□□ -1.42
HEL1YKR017C LCB3P47013 409 aa6.18□□□□□ -1.42
HEL1YKR017C SBH1P52870 82 aa6.18□□□□□ -1.42
HEL1YKR017C CYT2Q00873 224 aa6.18□□□□□ -1.42
HEL1YKR017C IRC15Q02733 499 aa6.18□□□□□ -1.42
HEL1YKR017C RPC11Q04307 110 aaPredicted RBP6.18□□□□□ -1.42
HEL1YKR017C ASA1Q06822 443 aa6.18□□□□□ -1.42
HEL1YKR017C CRD1Q07560 283 aa6.18□□□□□ -1.42
HEL1YKR017C THI20Q08224 551 aa6.18□□□□□ -1.42
HEL1YKR017C ENB1Q08299 606 aa6.18□□□□□ -1.42
HEL1YKR017C YOR387CQ08910 206 aa6.18□□□□□ -1.42
HEL1YKR017C YLR126CQ12288 251 aa6.18□□□□□ -1.42
HEL1YKR017C FRE7Q12333 620 aa6.18□□□□□ -1.42
HEL1YKR017C RPL12AP0CX53 165 aaKnown RBP6.17□□□□□ -1.42
HEL1YKR017C RPL12BP0CX54 165 aa6.17□□□□□ -1.42
HEL1YKR017C TRX3P25372 127 aa6.17□□□□□ -1.42
HEL1YKR017C YCR100CP25606 316 aa6.17□□□□□ -1.42
HEL1YKR017C PRE2P30656 287 aaKnown RBP6.17□□□□□ -1.42
HEL1YKR017C GPX2P38143 162 aa6.17□□□□□ -1.42
HEL1YKR017C GCV1P48015 400 aa6.17□□□□□ -1.42
HEL1YKR017C THG1P53215 237 aaKnown RBP6.17□□□□□ -1.42
HEL1YKR017C SYF2P53277 215 aaPredicted RBP6.17□□□□□ -1.42
HEL1YKR017C CPR8P53728 308 aa6.17□□□□□ -1.42
HEL1YKR017C INM2Q05533 292 aa6.17□□□□□ -1.42
HEL1YKR017C SEC4P07560 215 aaKnown RBP6.17□□□□□ -1.42
HEL1YKR017C TY1A-HP0C2I4 478 aaKnown RBP6.17□□□□□ -1.42
HEL1YKR017C YLL053CP0CD98 152 aa6.17□□□□□ -1.42
HEL1YKR017C INO4P13902 151 aa6.17□□□□□ -1.42
HEL1YKR017C YCR007CP25354 239 aa6.17□□□□□ -1.42
HEL1YKR017C YSC83P32792 385 aa6.17□□□□□ -1.42
HEL1YKR017C POP8P38208 133 aa6.17□□□□□ -1.42
HEL1YKR017C TRS20P38334 175 aa6.17□□□□□ -1.42
HEL1YKR017C SNO3P43544 222 aa6.17□□□□□ -1.42
HEL1YKR017C COQ5P49017 307 aa6.17□□□□□ -1.42
HEL1YKR017C BIO4P53630 237 aa6.17□□□□□ -1.42
HEL1YKR017C SNO2P53823 222 aa6.17□□□□□ -1.42
HEL1YKR017C WSC2P53832 503 aa6.17□□□□□ -1.42
HEL1YKR017C YNL165WP53891 406 aa6.17□□□□□ -1.42
HEL1YKR017C MRPS16Q02608 121 aa6.17□□□□□ -1.42
HEL1YKR017C HPF1Q05164 967 aa6.17□□□□□ -1.42
HEL1YKR017C ERP1Q05359 219 aaKnown RBP6.17□□□□□ -1.42
HEL1YKR017C PEX27Q08580 376 aa6.17□□□□□ -1.42
HEL1YKR017C ENV7Q12003 364 aa6.17□□□□□ -1.42
HEL1YKR017C HUT1Q12520 339 aa6.17□□□□□ -1.42
HEL1YKR017C YOS1Q3E834 85 aa6.17□□□□□ -1.42
HEL1YKR017C Q0142Q9ZZW4 58 aa6.17□□□□□ -1.42
HEL1YKR017C RAD6P06104 172 aa6.16□□□□□ -1.42
HEL1YKR017C NOP1P15646 327 aaKnown RBP6.16□□□□□ -1.42
HEL1YKR017C PEX34P25584 144 aa6.16□□□□□ -1.42
HEL1YKR017C YIH1P25637 258 aa6.16□□□□□ -1.42
HEL1YKR017C YKL187CP34231 750 aa6.16□□□□□ -1.42
HEL1YKR017C SDH4P37298 181 aa6.16□□□□□ -1.42
HEL1YKR017C XBP1P40489 647 aa6.16□□□□□ -1.42
HEL1YKR017C YIL059CP40520 121 aa6.16□□□□□ -1.42
HEL1YKR017C SAS2P40963 338 aa6.16□□□□□ -1.42
HEL1YKR017C CTK2P46962 323 aa6.16□□□□□ -1.42
HEL1YKR017C RSM10Q03201 203 aa6.16□□□□□ -1.42
HEL1YKR017C NUP53Q03790 475 aa6.16□□□□□ -1.42
HEL1YKR017C POS5Q06892 414 aa6.16□□□□□ -1.42
HEL1YKR017C YOR376WQ08900 122 aa6.16□□□□□ -1.42
HEL1YKR017C KTI11Q3E840 82 aa6.16□□□□□ -1.42
HEL1YKR017C YRF1-3P0CX14 1859 aa6.15□□□□□ -1.42
HEL1YKR017C YRF1-7P0CX15 1859 aa6.15□□□□□ -1.42
HEL1YKR017C YRF1-6P53819 1859 aa6.15□□□□□ -1.42
HEL1YKR017C YIR007WP40566 764 aa6.15□□□□□ -1.42
HEL1YKR017C ATG18P43601 500 aa6.15□□□□□ -1.42
HEL1YKR017C GON7P46984 123 aa6.15□□□□□ -1.42
HEL1YKR017C YNL095CP53932 642 aa6.15□□□□□ -1.42
HEL1YKR017C KTR5P53966 522 aaPredicted RBP6.15□□□□□ -1.42
HEL1YKR017C SDC1Q03323 175 aa6.15□□□□□ -1.42
HEL1YKR017C RCR2Q03446 210 aaKnown RBP6.15□□□□□ -1.42
HEL1YKR017C YDR209CQ03480 137 aa6.15□□□□□ -1.42
HEL1YKR017C RLM1Q12224 676 aa6.15□□□□□ -1.42
HEL1YKR017C YRF1-2P40105 1681 aa6.15□□□□□ -1.43
HEL1YKR017C DOP1Q03921 1698 aa6.15□□□□□ -1.43
HEL1YKR017C SAM35P14693 329 aa6.14□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms