RNA–Protein interactions for RNA: YKL123W

YKL123W, Transcript of Dubious open reading frame, yeast

Gene YKL123W, Length 381 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKL123W	YKL123W	RTT105	P40063	208 aa		0.74	□□□□□ -2.29
YKL123W	YKL123W	TRM9	P49957	279 aa		0.74	□□□□□ -2.29
YKL123W	YKL123W	KRE28	Q04431	385 aa		0.74	□□□□□ -2.29
YKL123W	YKL123W	KAP95	Q06142	861 aa	Known RBP	0.74	□□□□□ -2.29
YKL123W	YKL123W	CDC10	P25342	322 aa	Known RBP	0.73	□□□□□ -2.29
YKL123W	YKL123W	FLX1	P40464	311 aa		0.73	□□□□□ -2.29
YKL123W	YKL123W	YFL065C	P43539	102 aa		0.73	□□□□□ -2.29
YKL123W	YKL123W	GPM2	Q12008	311 aa		0.73	□□□□□ -2.29
YKL123W	YKL123W	BCY1	P07278	416 aa	Known RBP	0.72	□□□□□ -2.29
YKL123W	YKL123W	YHR212W-A	P0CX91	67 aa		0.72	□□□□□ -2.29
YKL123W	YKL123W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.72	□□□□□ -2.29	not detected
YKL123W	YKL123W	OPY1	P38271	328 aa		0.72	□□□□□ -2.29
YKL123W	YKL123W	SIP3	P38717	1229 aa		0.72	□□□□□ -2.29
YKL123W	YKL123W	BNA6	P43619	295 aa		0.72	□□□□□ -2.29
YKL123W	YKL123W	ARO8	P53090	500 aa	Known RBP	0.72	□□□□□ -2.29
YKL123W	YKL123W	NSA1	P53136	463 aa	Predicted RBP	0.72	□□□□□ -2.29
YKL123W	YKL123W	PAM18	Q07914	168 aa		0.72	□□□□□ -2.29
YKL123W	YKL123W	ATG31	Q12421	196 aa		0.72	□□□□□ -2.29
YKL123W	YKL123W	RPT5	P33297	434 aa	Known RBP	0.71	□□□□□ -2.3
YKL123W	YKL123W	EDC3	P39998	551 aa	Known RBP	0.71	□□□□□ -2.3
YKL123W	YKL123W	GVP36	P40531	326 aa	Known RBP	0.71	□□□□□ -2.3
YKL123W	YKL123W	EAF6	P47128	113 aa		0.71	□□□□□ -2.3
YKL123W	YKL123W	MRPL50	P53724	139 aa		0.71	□□□□□ -2.3
YKL123W	YKL123W	RCE1	Q03530	315 aa		0.71	□□□□□ -2.3
YKL123W	YKL123W	YLR236C	A0A023PZG4	107 aa		0.7	□□□□□ -2.3
YKL123W	YKL123W	TIM9	O74700	87 aa		0.7	□□□□□ -2.3
YKL123W	YKL123W	RPO26	P20435	155 aa		0.7	□□□□□ -2.3
YKL123W	YKL123W	NTF2	P33331	125 aa	Known RBP	0.7	□□□□□ -2.3
YKL123W	YKL123W	CUE1	P38428	203 aa		0.7	□□□□□ -2.3
YKL123W	YKL123W	PRM8	P53174	237 aa		0.7	□□□□□ -2.3
YKL123W	YKL123W	YNL247W	P53852	767 aa	Known RBP	0.7	□□□□□ -2.3
YKL123W	YKL123W	DRS2	P39524	1355 aa		0.7	□□□□□ -2.3
YKL123W	YKL123W	SIR2	P06700	562 aa		0.69	□□□□□ -2.3
YKL123W	YKL123W	SPT3	P06844	337 aa		0.69	□□□□□ -2.3
YKL123W	YKL123W	MRPL25	P23369	157 aa		0.69	□□□□□ -2.3
YKL123W	YKL123W	RIB7	P33312	244 aa		0.69	□□□□□ -2.3
YKL123W	YKL123W	YHL042W	P38729	150 aa		0.69	□□□□□ -2.3
YKL123W	YKL123W	CWC27	Q02770	301 aa		0.69	□□□□□ -2.3
YKL123W	YKL123W	MCP1	Q12106	302 aa		0.69	□□□□□ -2.3
YKL123W	YKL123W	SEC11	P15367	167 aa		0.68	□□□□□ -2.3
YKL123W	YKL123W	SEC17	P32602	292 aa		0.68	□□□□□ -2.3
YKL123W	YKL123W	VMA22	P38784	181 aa		0.68	□□□□□ -2.3
YKL123W	YKL123W	YBR285W	P38354	144 aa		0.67	□□□□□ -2.3
YKL123W	YKL123W	NUP84	P52891	726 aa		0.67	□□□□□ -2.3
YKL123W	YKL123W	CUE4	Q04201	117 aa	Predicted RBP	0.67	□□□□□ -2.3
YKL123W	YKL123W	RRP36	Q12481	300 aa	Predicted RBP	0.67	□□□□□ -2.3
YKL123W	YKL123W	TDA8	Q6B2U8	126 aa		0.67	□□□□□ -2.3
YKL123W	YKL123W	YNL134C	P53912	376 aa	Known RBP	0.66	□□□□□ -2.3
YKL123W	YKL123W	YLR173W	Q06247	608 aa		0.66	□□□□□ -2.3
YKL123W	YKL123W	SLH1	P53327	1967 aa	Known RBP	0.65	□□□□□ -2.31
YKL123W	YKL123W	TCA17	P32613	152 aa		0.65	□□□□□ -2.31
YKL123W	YKL123W	PRE6	P40303	254 aa	Known RBP	0.65	□□□□□ -2.31
YKL123W	YKL123W	YHR007C-A	Q07074	71 aa		0.65	□□□□□ -2.31
YKL123W	YKL123W	RRT8	Q08219	342 aa		0.65	□□□□□ -2.31
YKL123W	YKL123W	YOL160W	Q08321	113 aa		0.65	□□□□□ -2.31
YKL123W	YKL123W	RAD28	Q12021	506 aa		0.65	□□□□□ -2.31
YKL123W	YKL123W	UTP30	P36144	274 aa	Known RBP	0.64	□□□□□ -2.31
YKL123W	YKL123W	SKG1	P36169	355 aa		0.64	□□□□□ -2.31
YKL123W	YKL123W	URA6	P15700	204 aa		0.63	□□□□□ -2.31
YKL123W	YKL123W	DBF2	P22204	572 aa		0.63	□□□□□ -2.31
YKL123W	YKL123W	LDB7	P38210	180 aa		0.63	□□□□□ -2.31
YKL123W	YKL123W	HYR1	P40581	163 aa	Known RBP	0.63	□□□□□ -2.31
YKL123W	YKL123W	LIA1	P47120	325 aa	Known RBP	0.63	□□□□□ -2.31
YKL123W	YKL123W	SRL4	Q03085	281 aa		0.63	□□□□□ -2.31
YKL123W	YKL123W	CDC123	Q05791	360 aa		0.63	□□□□□ -2.31
YKL123W	YKL123W	LCL2	Q08045	131 aa		0.63	□□□□□ -2.31
YKL123W	YKL123W	CDC28	P00546	298 aa	Known RBP	0.62	□□□□□ -2.31
YKL123W	YKL123W	YER034W	P40022	185 aa	Known RBP	0.62	□□□□□ -2.31
YKL123W	YKL123W	FAR7	P43592	221 aa		0.61	□□□□□ -2.31
YKL123W	YKL123W	YUH1	P35127	236 aa		0.6	□□□□□ -2.31
YKL123W	YKL123W	APS1	P35181	156 aa		0.6	□□□□□ -2.31
YKL123W	YKL123W	YMR252C	Q04814	134 aa		0.6	□□□□□ -2.31
YKL123W	YKL123W	ACC1	Q00955	2233 aa	Known RBP	0.6	□□□□□ -2.31
YKL123W	YKL123W	MDM35	O60200	86 aa		0.59	□□□□□ -2.31
YKL123W	YKL123W	YFH7	P43591	353 aa		0.59	□□□□□ -2.31
YKL123W	YKL123W	RPC17	P47076	161 aa		0.59	□□□□□ -2.31
YKL123W	YKL123W	FYV6	P53913	173 aa		0.59	□□□□□ -2.31
YKL123W	YKL123W	YDR274C	P87283	123 aa		0.59	□□□□□ -2.31
YKL123W	YKL123W	YDR249C	Q03787	373 aa		0.59	□□□□□ -2.31
YKL123W	YKL123W	YRA1	Q12159	226 aa	Known RBP	0.59	□□□□□ -2.31
YKL123W	YKL123W	MED4	Q12343	284 aa		0.59	□□□□□ -2.31
YKL123W	YKL123W	URA5	P13298	226 aa	Known RBP	0.58	□□□□□ -2.32
YKL123W	YKL123W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	0.58	□□□□□ -2.32	not detected
YKL123W	YKL123W	FMC1	P40491	155 aa		0.58	□□□□□ -2.32
YKL123W	YKL123W	BRR6	P53062	197 aa		0.58	□□□□□ -2.32
YKL123W	YKL123W	RPL27A	P0C2H6	136 aa	Known RBP	0.57	□□□□□ -2.32
YKL123W	YKL123W	BET1	P22804	142 aa		0.57	□□□□□ -2.32
YKL123W	YKL123W	BXI1	P48558	297 aa		0.57	□□□□□ -2.32
YKL123W	YKL123W	YLR283W	Q05867	314 aa		0.57	□□□□□ -2.32
YKL123W	YKL123W	KSS1	P14681	368 aa		0.56	□□□□□ -2.32
YKL123W	YKL123W	YCL042W	P25572	119 aa		0.56	□□□□□ -2.32
YKL123W	YKL123W	MIC26	P50087	233 aa		0.56	□□□□□ -2.32
YKL123W	YKL123W	ATP15	P21306	62 aa		0.55	□□□□□ -2.32
YKL123W	YKL123W	YEA4	P40004	342 aa		0.55	□□□□□ -2.32
YKL123W	YKL123W	COX15	P40086	486 aa		0.55	□□□□□ -2.32
YKL123W	YKL123W	YPL073C	P40323	161 aa		0.55	□□□□□ -2.32
YKL123W	YKL123W	YGR050C	P53231	118 aa		0.55	□□□□□ -2.32
YKL123W	YKL123W	SEC4	P07560	215 aa	Known RBP	0.54	□□□□□ -2.32
YKL123W	YKL123W	RPB3	P16370	318 aa	Known RBP	0.54	□□□□□ -2.32
YKL123W	YKL123W	YEL008W	P40001	126 aa		0.54	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 52 ms