RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W TY1A-LR3P0CX75 440 aa4.34□□□□□ -1.72
MSH1YHR120W TY1A-ML2P0CX76 440 aa4.34□□□□□ -1.72
MSH1YHR120W RPL35AP0CX84 120 aaKnown RBP4.34□□□□□ -1.72
MSH1YHR120W RPL35BP0CX85 120 aaKnown RBP4.34□□□□□ -1.72
MSH1YHR120W YKL187CP34231 750 aa4.34□□□□□ -1.72
MSH1YHR120W UMP1P38293 148 aa4.34□□□□□ -1.72
MSH1YHR120W UBP8P50102 471 aa4.34□□□□□ -1.72
MSH1YHR120W SKP1P52286 194 aa4.34□□□□□ -1.72
MSH1YHR120W TNA1P53322 534 aa4.34□□□□□ -1.72
MSH1YHR120W YML018CQ03730 393 aa4.34□□□□□ -1.72
MSH1YHR120W YDR248CQ03786 193 aa4.34□□□□□ -1.72
MSH1YHR120W YDR387CQ04162 555 aa4.34□□□□□ -1.72
MSH1YHR120W RTT103Q05543 409 aa4.34□□□□□ -1.72
MSH1YHR120W TY1A-GR1Q12085 440 aa4.34□□□□□ -1.72
MSH1YHR120W VAM3Q12241 283 aa4.34□□□□□ -1.72
MSH1YHR120W YPR145C-AQ2V2P0 78 aa4.34□□□□□ -1.72
MSH1YHR120W TY1A-PR3Q6Q5H1 440 aaKnown RBP4.34□□□□□ -1.72
MSH1YHR120W TY1A-OLQ92392 440 aaKnown RBP4.34□□□□□ -1.72
MSH1YHR120W MSW1P04803 379 aa4.33□□□□□ -1.72
MSH1YHR120W YEA6P39953 335 aa4.33□□□□□ -1.72
MSH1YHR120W HXT14P42833 540 aa4.33□□□□□ -1.72
MSH1YHR120W UFD1P53044 361 aa4.33□□□□□ -1.72
MSH1YHR120W ASM4Q05166 528 aa4.33□□□□□ -1.72
MSH1YHR120W FIT3Q08907 204 aa4.33□□□□□ -1.72
MSH1YHR120W RNH203Q12338 110 aa4.33□□□□□ -1.72
MSH1YHR120W CDC7P06243 507 aa4.33□□□□□ -1.72
MSH1YHR120W PET494P07390 489 aaPredicted RBP4.33□□□□□ -1.72
MSH1YHR120W RFA1P22336 621 aaKnown RBP4.33□□□□□ -1.72
MSH1YHR120W ATG8P38182 117 aaRIP-Chip data4.33□□□□□ -1.72not detected
MSH1YHR120W RMD6P39975 231 aa4.33□□□□□ -1.72
MSH1YHR120W CGR1P53188 120 aa4.33□□□□□ -1.72
MSH1YHR120W GPI15P53961 229 aa4.33□□□□□ -1.72
MSH1YHR120W ERV25P54837 211 aaKnown RBP4.33□□□□□ -1.72
MSH1YHR120W TIM10P87108 93 aa4.33□□□□□ -1.72
MSH1YHR120W NRG1Q03125 231 aa4.33□□□□□ -1.72
MSH1YHR120W YMR253CQ04835 414 aa4.33□□□□□ -1.72
MSH1YHR120W ERP1Q05359 219 aaKnown RBP4.33□□□□□ -1.72
MSH1YHR120W NNT1Q05874 261 aa4.33□□□□□ -1.72
MSH1YHR120W FCF2Q12035 217 aaPredicted RBP4.33□□□□□ -1.72
MSH1YHR120W YLR118CQ12354 227 aa4.33□□□□□ -1.72
MSH1YHR120W STE18P18852 110 aa4.32□□□□□ -1.72
MSH1YHR120W PCL1P24867 279 aa4.32□□□□□ -1.72
MSH1YHR120W SIP1P32578 815 aa4.32□□□□□ -1.72
MSH1YHR120W FRM2P37261 193 aa4.32□□□□□ -1.72
MSH1YHR120W YBR096WP38256 230 aa4.32□□□□□ -1.72
MSH1YHR120W THI74Q04083 370 aa4.32□□□□□ -1.72
MSH1YHR120W RRT7Q07829 113 aa4.32□□□□□ -1.72
MSH1YHR120W PML1Q07930 204 aaPredicted RBP4.32□□□□□ -1.72
MSH1YHR120W Q0297Q9ZZV8 51 aa4.32□□□□□ -1.72
MSH1YHR120W KRR1P25586 316 aaPredicted RBP4.32□□□□□ -1.72
MSH1YHR120W ERG3P32353 365 aa4.32□□□□□ -1.72
MSH1YHR120W AVT5P38176 459 aa4.32□□□□□ -1.72
MSH1YHR120W IMD2P38697 523 aaKnown RBP4.32□□□□□ -1.72
MSH1YHR120W YEA4P40004 342 aa4.32□□□□□ -1.72
MSH1YHR120W PIG2P40187 538 aa4.32□□□□□ -1.72
MSH1YHR120W PAU15P40585 124 aa4.32□□□□□ -1.72
MSH1YHR120W GWT1P47026 490 aa4.32□□□□□ -1.72
MSH1YHR120W HHT1P61830 136 aa4.32□□□□□ -1.72
MSH1YHR120W TMA23Q03525 211 aa4.32□□□□□ -1.72
MSH1YHR120W LRS4Q04087 347 aaKnown RBP4.32□□□□□ -1.72
MSH1YHR120W TMC1Q08422 150 aaPredicted RBP4.32□□□□□ -1.72
MSH1YHR120W YLR146W-AQ2V2P1 62 aa4.32□□□□□ -1.72
MSH1YHR120W UBA3Q99344 299 aa4.32□□□□□ -1.72
MSH1YHR120W MEK1P24719 497 aaPredicted RBP4.32□□□□□ -1.72
MSH1YHR120W MRPL4P36517 319 aa4.32□□□□□ -1.72
MSH1YHR120W SDH4P37298 181 aa4.32□□□□□ -1.72
MSH1YHR120W YPT31P38555 223 aaKnown RBP4.32□□□□□ -1.72
MSH1YHR120W LSM4P40070 187 aaKnown RBP4.32□□□□□ -1.72
MSH1YHR120W DAN1P47178 298 aa4.32□□□□□ -1.72
MSH1YHR120W SKO1Q02100 647 aa4.32□□□□□ -1.72
MSH1YHR120W THI72Q08579 599 aa4.32□□□□□ -1.72
MSH1YHR120W YDR157WA0A023PZE8 133 aa4.31□□□□□ -1.72
MSH1YHR120W AGA2P32781 87 aa4.31□□□□□ -1.72
MSH1YHR120W FAT1P38225 669 aa4.31□□□□□ -1.72
MSH1YHR120W NSE4P43124 402 aa4.31□□□□□ -1.72
MSH1YHR120W YJR056CP47115 236 aa4.31□□□□□ -1.72
MSH1YHR120W YIF1P53845 314 aaKnown RBP4.31□□□□□ -1.72
MSH1YHR120W CRZ1P53968 678 aa4.31□□□□□ -1.72
MSH1YHR120W ISA2Q12425 185 aa4.31□□□□□ -1.72
MSH1YHR120W UTP20P35194 2493 aaKnown RBP4.31□□□□□ -1.72
MSH1YHR120W AFG1P32317 509 aa4.31□□□□□ -1.72
MSH1YHR120W YBR197CP38306 217 aa4.31□□□□□ -1.72
MSH1YHR120W RNH201P53942 307 aa4.31□□□□□ -1.72
MSH1YHR120W SED1Q01589 338 aa4.31□□□□□ -1.72
MSH1YHR120W YTH1Q06102 208 aaPredicted RBP4.31□□□□□ -1.72
MSH1YHR120W YOR097CQ12274 175 aaPredicted RBP4.31□□□□□ -1.72
MSH1YHR120W MED4Q12343 284 aa4.31□□□□□ -1.72
MSH1YHR120W WHI5Q12416 295 aa4.31□□□□□ -1.72
MSH1YHR120W ADH3P07246 375 aaKnown RBP4.3□□□□□ -1.72
MSH1YHR120W VMA3P25515 160 aa4.3□□□□□ -1.72
MSH1YHR120W DAL80P26343 269 aa4.3□□□□□ -1.72
MSH1YHR120W SPC29P33419 253 aa4.3□□□□□ -1.72
MSH1YHR120W YBR292CP38357 123 aa4.3□□□□□ -1.72
MSH1YHR120W VMA21P41806 77 aa4.3□□□□□ -1.72
MSH1YHR120W UBC13P52490 153 aa4.3□□□□□ -1.72
MSH1YHR120W YIP5P53108 310 aa4.3□□□□□ -1.72
MSH1YHR120W PKP2P53170 491 aa4.3□□□□□ -1.72
MSH1YHR120W ALG9P53868 555 aaKnown RBP4.3□□□□□ -1.72
MSH1YHR120W YDR391CQ04170 232 aa4.3□□□□□ -1.72
MSH1YHR120W COX5BP00425 151 aa4.3□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms