RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W HEM25Q07534 307 aa1.75□□□□□ -2.13
SSF1YHR066W GRE1Q08969 168 aa1.75□□□□□ -2.13
SSF1YHR066W YPL229WQ99395 206 aa1.75□□□□□ -2.13
SSF1YHR066W YOL163WP0CF20 169 aa1.74□□□□□ -2.13
SSF1YHR066W URA6P15700 204 aa1.74□□□□□ -2.13
SSF1YHR066W ERD2P18414 219 aa1.74□□□□□ -2.13
SSF1YHR066W UTR5P32630 166 aa1.74□□□□□ -2.13
SSF1YHR066W VPS51P36116 164 aa1.74□□□□□ -2.13
SSF1YHR066W YBL081WP38180 368 aaKnown RBP1.74□□□□□ -2.13
SSF1YHR066W YMR144WP40214 342 aaKnown RBP1.74□□□□□ -2.13
SSF1YHR066W MRH4P53166 561 aa1.74□□□□□ -2.13
SSF1YHR066W YGL034CP53186 121 aa1.74□□□□□ -2.13
SSF1YHR066W SLX9P53251 210 aaPredicted RBP1.74□□□□□ -2.13
SSF1YHR066W SYF2P53277 215 aaPredicted RBP1.74□□□□□ -2.13
SSF1YHR066W AAH1P53909 347 aa1.74□□□□□ -2.13
SSF1YHR066W YDL144CQ07589 356 aa1.74□□□□□ -2.13
SSF1YHR066W RRP40Q08285 240 aaKnown RBP1.74□□□□□ -2.13
SSF1YHR066W YOR186WQ08560 144 aa1.74□□□□□ -2.13
SSF1YHR066W MRX4Q12467 430 aa1.74□□□□□ -2.13
SSF1YHR066W YLR419WQ06698 1435 aaKnown RBP1.74□□□□□ -2.13
SSF1YHR066W SNF6P18888 332 aa1.73□□□□□ -2.13
SSF1YHR066W MRPL39P36533 70 aa1.73□□□□□ -2.13
SSF1YHR066W YCR087C-AP37263 153 aa1.73□□□□□ -2.13
SSF1YHR066W YHI9P38765 294 aa1.73□□□□□ -2.13
SSF1YHR066W AVT6P40074 448 aa1.73□□□□□ -2.13
SSF1YHR066W YJR141WP47172 347 aaPredicted RBP1.73□□□□□ -2.13
SSF1YHR066W PDR17P53844 350 aa1.73□□□□□ -2.13
SSF1YHR066W YDR114CQ04597 100 aa1.73□□□□□ -2.13
SSF1YHR066W FEX1Q08913 375 aa1.73□□□□□ -2.13
SSF1YHR066W FEX2Q08991 375 aa1.73□□□□□ -2.13
SSF1YHR066W MOT1P32333 1867 aa1.73□□□□□ -2.13
SSF1YHR066W CDC28P00546 298 aaKnown RBP1.72□□□□□ -2.13
SSF1YHR066W FBA1P14540 359 aaKnown RBP1.72□□□□□ -2.13
SSF1YHR066W DBF2P22204 572 aa1.72□□□□□ -2.13
SSF1YHR066W ERG2P32352 222 aa1.72□□□□□ -2.13
SSF1YHR066W SPS18P32572 300 aa1.72□□□□□ -2.13
SSF1YHR066W PHO89P38361 574 aa1.72□□□□□ -2.13
SSF1YHR066W GRE3P38715 327 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13not detected
SSF1YHR066W ARN2P38724 620 aa1.72□□□□□ -2.13
SSF1YHR066W POG1P40473 351 aa1.72□□□□□ -2.13
SSF1YHR066W YGL159WP53110 370 aa1.72□□□□□ -2.13
SSF1YHR066W YIP3P53633 176 aa1.72□□□□□ -2.13
SSF1YHR066W MIX17Q03667 156 aa1.72□□□□□ -2.13
SSF1YHR066W YDR124WQ04608 324 aa1.72□□□□□ -2.13
SSF1YHR066W MSA1Q08471 629 aa1.72□□□□□ -2.13
SSF1YHR066W SYC1Q08553 188 aaPredicted RBP1.72□□□□□ -2.13
SSF1YHR066W YPL150WQ12152 901 aa1.72□□□□□ -2.13
SSF1YHR066W ADE6P38972 1358 aaKnown RBP1.72□□□□□ -2.13
SSF1YHR066W YHR139C-AO13536 103 aa1.72□□□□□ -2.13
SSF1YHR066W COX5AP00424 153 aa1.72□□□□□ -2.13
SSF1YHR066W RSA4P25382 515 aaKnown RBP1.72□□□□□ -2.13
SSF1YHR066W OAC1P32332 324 aa1.72□□□□□ -2.13
SSF1YHR066W CSG2P35206 410 aa1.72□□□□□ -2.13
SSF1YHR066W MRPL28P36527 147 aa1.72□□□□□ -2.13
SSF1YHR066W SHG1P38337 142 aa1.72□□□□□ -2.13
SSF1YHR066W COG3P40094 801 aa1.72□□□□□ -2.13
SSF1YHR066W PEX17P40155 199 aa1.72□□□□□ -2.13
SSF1YHR066W BXI1P48558 297 aa1.72□□□□□ -2.13
SSF1YHR066W MMS2P53152 137 aa1.72□□□□□ -2.13
SSF1YHR066W SWT21P53873 357 aaPredicted RBP1.72□□□□□ -2.13
SSF1YHR066W GOT1Q03554 138 aa1.72□□□□□ -2.13
SSF1YHR066W YNG1Q08465 219 aa1.72□□□□□ -2.13
SSF1YHR066W PRR2Q12310 699 aa1.72□□□□□ -2.13
SSF1YHR066W ATG5Q12380 294 aa1.72□□□□□ -2.13
SSF1YHR066W YBL008W-AQ3E821 79 aa1.72□□□□□ -2.13
SSF1YHR066W FKS1P38631 1876 aaKnown RBP1.72□□□□□ -2.13
SSF1YHR066W GCN3P14741 305 aa1.71□□□□□ -2.14
SSF1YHR066W YKR032WP36127 104 aa1.71□□□□□ -2.14
SSF1YHR066W YER121WP40076 114 aa1.71□□□□□ -2.14
SSF1YHR066W YPL039WQ03080 316 aa1.71□□□□□ -2.14
SSF1YHR066W SNO1Q03144 224 aa1.71□□□□□ -2.14
SSF1YHR066W PRM15Q03262 622 aa1.71□□□□□ -2.14
SSF1YHR066W YMR279CQ03263 540 aa1.71□□□□□ -2.14
SSF1YHR066W NNT1Q05874 261 aa1.71□□□□□ -2.14
SSF1YHR066W YET3Q07451 203 aa1.71□□□□□ -2.14
SSF1YHR066W USB1Q12208 290 aaKnown RBP1.71□□□□□ -2.14
SSF1YHR066W TIM22Q12328 207 aa1.71□□□□□ -2.14
SSF1YHR066W YBL112CQ3E7Y4 105 aa1.71□□□□□ -2.14
SSF1YHR066W TOR2P32600 2474 aaKnown RBP1.71□□□□□ -2.14
SSF1YHR066W MYO1P08964 1928 aa1.7□□□□□ -2.14
SSF1YHR066W SEN1Q00416 2231 aaKnown RBP1.7□□□□□ -2.14
SSF1YHR066W SEC4P07560 215 aaKnown RBP1.7□□□□□ -2.14
SSF1YHR066W UBC6P33296 250 aaPredicted RBP1.7□□□□□ -2.14
SSF1YHR066W ECM13P38195 257 aa1.7□□□□□ -2.14
SSF1YHR066W ECM33P38248 429 aaKnown RBP1.7□□□□□ -2.14
SSF1YHR066W FES1P38260 290 aa1.7□□□□□ -2.14
SSF1YHR066W MED6P38782 295 aa1.7□□□□□ -2.14
SSF1YHR066W SRP14P38985 146 aa1.7□□□□□ -2.14
SSF1YHR066W SUR2P38992 349 aa1.7□□□□□ -2.14
SSF1YHR066W YER189WP40104 122 aa1.7□□□□□ -2.14
SSF1YHR066W FAR7P43592 221 aa1.7□□□□□ -2.14
SSF1YHR066W RPE1P46969 238 aa1.7□□□□□ -2.14
SSF1YHR066W YJL028WP47062 111 aa1.7□□□□□ -2.14
SSF1YHR066W YJL016WP47072 561 aa1.7□□□□□ -2.14
SSF1YHR066W YJR056CP47115 236 aa1.7□□□□□ -2.14
SSF1YHR066W MIG2P53035 382 aa1.7□□□□□ -2.14
SSF1YHR066W YNL140CP53910 189 aa1.7□□□□□ -2.14
SSF1YHR066W NRK1P53915 240 aa1.7□□□□□ -2.14
SSF1YHR066W PET191Q02772 108 aa1.7□□□□□ -2.14
SSF1YHR066W YDR248CQ03786 193 aa1.7□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 33.8 ms