RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W OCH1P31755 480 aa5.67□□□□□ -1.5
NUP49YGL172W RPD3P32561 433 aa5.67□□□□□ -1.5
NUP49YGL172W MRPL27P36526 146 aaPredicted RBP5.67□□□□□ -1.5
NUP49YGL172W SWD3P38123 315 aa5.67□□□□□ -1.5
NUP49YGL172W AIM20P40451 204 aa5.67□□□□□ -1.5
NUP49YGL172W GEP7P53171 287 aa5.67□□□□□ -1.5
NUP49YGL172W SMM1P53720 384 aaKnown RBP5.67□□□□□ -1.5
NUP49YGL172W YNR064CP53750 290 aa5.67□□□□□ -1.5
NUP49YGL172W ALG9P53868 555 aaKnown RBP5.67□□□□□ -1.5
NUP49YGL172W YML018CQ03730 393 aa5.67□□□□□ -1.5
NUP49YGL172W LIP2Q06005 328 aa5.67□□□□□ -1.5
NUP49YGL172W RDI1Q12434 202 aa5.67□□□□□ -1.5
NUP49YGL172W SPS2P08459 502 aa5.66□□□□□ -1.5
NUP49YGL172W RNA14P25298 677 aaKnown RBP5.66□□□□□ -1.5
NUP49YGL172W MIA40P36046 403 aa5.66□□□□□ -1.5
NUP49YGL172W YHC3P47040 408 aa5.66□□□□□ -1.5
NUP49YGL172W MSE1P48525 536 aa5.66□□□□□ -1.5
NUP49YGL172W YAP1802P53309 568 aa5.66□□□□□ -1.5
NUP49YGL172W CSI2Q08054 341 aa5.66□□□□□ -1.5
NUP49YGL172W RFM1Q12192 310 aa5.66□□□□□ -1.5
NUP49YGL172W YOR192C-CQ3E736 78 aa5.66□□□□□ -1.5
NUP49YGL172W YMR105W-AQ8TGS8 64 aa5.66□□□□□ -1.5
NUP49YGL172W URA3P03962 267 aa5.65□□□□□ -1.5
NUP49YGL172W FMT1P32785 401 aa5.65□□□□□ -1.5
NUP49YGL172W PAN3P36102 679 aaPredicted RBP5.65□□□□□ -1.5
NUP49YGL172W YBR242WP38331 238 aa5.65□□□□□ -1.5
NUP49YGL172W PIR5P46999 287 aa5.65□□□□□ -1.5
NUP49YGL172W SLX9P53251 210 aaPredicted RBP5.65□□□□□ -1.5
NUP49YGL172W FIT1Q04433 528 aa5.65□□□□□ -1.5
NUP49YGL172W IRC25Q07951 179 aa5.65□□□□□ -1.5
NUP49YGL172W YOR385WQ08909 290 aa5.65□□□□□ -1.5
NUP49YGL172W YDL009CQ12210 107 aa5.65□□□□□ -1.5
NUP49YGL172W VAM3Q12241 283 aa5.65□□□□□ -1.5
NUP49YGL172W RDL1Q12305 139 aaKnown RBP5.65□□□□□ -1.5
NUP49YGL172W PET20Q99373 253 aa5.65□□□□□ -1.5
NUP49YGL172W BPH1P25356 2167 aa5.65□□□□□ -1.5
NUP49YGL172W RAD52P06778 471 aaKnown RBP5.65□□□□□ -1.51
NUP49YGL172W APA2P22108 325 aa5.65□□□□□ -1.51
NUP49YGL172W ACH1P32316 526 aa5.65□□□□□ -1.51
NUP49YGL172W VMA8P32610 256 aaKnown RBP5.65□□□□□ -1.51
NUP49YGL172W NTC20P38302 140 aaPredicted RBP5.65□□□□□ -1.51
NUP49YGL172W XPT1P47165 209 aa5.65□□□□□ -1.51
NUP49YGL172W SOL1P50278 321 aa5.65□□□□□ -1.51
NUP49YGL172W OKP1P53298 406 aa5.65□□□□□ -1.51
NUP49YGL172W HSK3P69852 69 aa5.65□□□□□ -1.51
NUP49YGL172W YOL118CQ08259 102 aa5.65□□□□□ -1.51
NUP49YGL172W MED4Q12343 284 aa5.65□□□□□ -1.51
NUP49YGL172W CKA1P15790 372 aa5.64□□□□□ -1.51
NUP49YGL172W SEN2P16658 377 aa5.64□□□□□ -1.51
NUP49YGL172W BUD23P25627 275 aaPredicted RBP5.64□□□□□ -1.51
NUP49YGL172W RPB7P34087 171 aa5.64□□□□□ -1.51
NUP49YGL172W MRPL3P36516 390 aa5.64□□□□□ -1.51
NUP49YGL172W GTF1P53260 183 aaPredicted RBP5.64□□□□□ -1.51
NUP49YGL172W RPL21AQ02753 160 aaKnown RBP5.64□□□□□ -1.51
NUP49YGL172W TSA2Q04120 196 aa5.64□□□□□ -1.51
NUP49YGL172W YDR286CQ05530 114 aa5.64□□□□□ -1.51
NUP49YGL172W SYM1Q06563 197 aa5.64□□□□□ -1.51
NUP49YGL172W RPL21BQ12672 160 aaKnown RBP5.64□□□□□ -1.51
NUP49YGL172W UBA3Q99344 299 aa5.64□□□□□ -1.51
NUP49YGL172W NHP6BP11633 99 aaKnown RBP5.63□□□□□ -1.51
NUP49YGL172W CPR4P25334 318 aa5.63□□□□□ -1.51
NUP49YGL172W ATG22P25568 528 aa5.63□□□□□ -1.51
NUP49YGL172W SWD2P36104 329 aaPredicted RBP5.63□□□□□ -1.51
NUP49YGL172W POP8P38208 133 aa5.63□□□□□ -1.51
NUP49YGL172W GPI18P38211 433 aa5.63□□□□□ -1.51
NUP49YGL172W COS8P38723 381 aa5.63□□□□□ -1.51
NUP49YGL172W LSM1P47017 172 aaKnown RBP5.63□□□□□ -1.51
NUP49YGL172W YGL262WP53054 175 aa5.63□□□□□ -1.51
NUP49YGL172W NRG1Q03125 231 aa5.63□□□□□ -1.51
NUP49YGL172W TRI1Q05024 226 aa5.63□□□□□ -1.51
NUP49YGL172W YLR365WQ7LIF2 110 aa5.63□□□□□ -1.51
NUP49YGL172W GDH1P07262 454 aaKnown RBP5.62□□□□□ -1.51
NUP49YGL172W FUS3P16892 353 aaKnown RBP5.62□□□□□ -1.51
NUP49YGL172W ATP10P18496 279 aa5.62□□□□□ -1.51
NUP49YGL172W TRR1P29509 319 aaKnown RBP5.62□□□□□ -1.51
NUP49YGL172W IES6P32617 166 aa5.62□□□□□ -1.51
NUP49YGL172W FLO10P36170 1169 aa5.62□□□□□ -1.51
NUP49YGL172W SSO2P39926 295 aa5.62□□□□□ -1.51
NUP49YGL172W BMT5P40493 336 aa5.62□□□□□ -1.51
NUP49YGL172W ABM1P47146 123 aa5.62□□□□□ -1.51
NUP49YGL172W TTI2P47168 421 aa5.62□□□□□ -1.51
NUP49YGL172W DIE2P50076 525 aa5.62□□□□□ -1.51
NUP49YGL172W CAB5Q03941 241 aa5.62□□□□□ -1.51
NUP49YGL172W VBA1Q04301 562 aa5.62□□□□□ -1.51
NUP49YGL172W ECM18Q04623 453 aa5.62□□□□□ -1.51
NUP49YGL172W RIM9Q04734 239 aa5.62□□□□□ -1.51
NUP49YGL172W NOC4Q06512 552 aaPredicted RBP5.62□□□□□ -1.51
NUP49YGL172W SCP1Q08873 200 aa5.62□□□□□ -1.51
NUP49YGL172W SWT1Q12104 458 aa5.62□□□□□ -1.51
NUP49YGL172W MIR1P23641 311 aaKnown RBP5.61□□□□□ -1.51
NUP49YGL172W VMA11P32842 164 aa5.61□□□□□ -1.51
NUP49YGL172W PAC2P39937 518 aa5.61□□□□□ -1.51
NUP49YGL172W WSC2P53832 503 aa5.61□□□□□ -1.51
NUP49YGL172W CWC25P53854 179 aaKnown RBP5.61□□□□□ -1.51
NUP49YGL172W MRPS16Q02608 121 aa5.61□□□□□ -1.51
NUP49YGL172W DPB4Q04603 196 aaKnown RBP5.61□□□□□ -1.51
NUP49YGL172W RTT103Q05543 409 aa5.61□□□□□ -1.51
NUP49YGL172W STP4Q07351 490 aa5.61□□□□□ -1.51
NUP49YGL172W TRM13Q12383 476 aa5.61□□□□□ -1.51
NUP49YGL172W YPR108W-AQ3E7B3 70 aa5.61□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms