RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W MRPL49P40858 161 aaPredicted RBP3.77□□□□□ -1.81
UBC6YER100W ECM11Q04110 302 aa3.77□□□□□ -1.81
UBC6YER100W IGO2Q9P305 131 aa3.77□□□□□ -1.81
UBC6YER100W PTM1P32857 523 aa3.76□□□□□ -1.81
UBC6YER100W TKL2P33315 681 aa3.76□□□□□ -1.81
UBC6YER100W YKR041WP36134 250 aa3.76□□□□□ -1.81
UBC6YER100W YAR068WP39564 161 aa3.76□□□□□ -1.81
UBC6YER100W BBP1Q12365 385 aa3.76□□□□□ -1.81
UBC6YER100W SNF4P12904 322 aa3.75□□□□□ -1.81
UBC6YER100W ARO7P32178 256 aa3.75□□□□□ -1.81
UBC6YER100W SEC17P32602 292 aa3.75□□□□□ -1.81
UBC6YER100W YOX1P34161 385 aa3.75□□□□□ -1.81
UBC6YER100W POP4P38336 279 aa3.75□□□□□ -1.81
UBC6YER100W YKE4P40544 346 aa3.75□□□□□ -1.81
UBC6YER100W FMP32P43557 207 aa3.75□□□□□ -1.81
UBC6YER100W ECO1P43605 281 aa3.75□□□□□ -1.81
UBC6YER100W NUP49Q02199 472 aa3.75□□□□□ -1.81
UBC6YER100W RIO1Q12196 484 aaKnown RBP3.75□□□□□ -1.81
UBC6YER100W TDA8Q6B2U8 126 aa3.75□□□□□ -1.81
UBC6YER100W SOD1P00445 154 aaKnown RBP3.74□□□□□ -1.81
UBC6YER100W SIR2P06700 562 aa3.74□□□□□ -1.81
UBC6YER100W YGP1P38616 354 aaKnown RBP3.74□□□□□ -1.81
UBC6YER100W ARC15P40518 154 aaRIP-Chip data3.74□□□□□ -1.81not detected
UBC6YER100W PFS2P42841 465 aaKnown RBP3.74□□□□□ -1.81
UBC6YER100W YOR283WQ12040 230 aaKnown RBP3.74□□□□□ -1.81
UBC6YER100W YHR214C-EQ8TGK0 99 aa3.74□□□□□ -1.81
UBC6YER100W Q0255P03881 472 aa3.73□□□□□ -1.81
UBC6YER100W RAD10P06838 210 aa3.73□□□□□ -1.81
UBC6YER100W ATG22P25568 528 aa3.73□□□□□ -1.81
UBC6YER100W YHR125WP38831 101 aa3.73□□□□□ -1.81
UBC6YER100W YIR035CP40579 254 aa3.73□□□□□ -1.81
UBC6YER100W BUD13P46947 266 aaPredicted RBP3.73□□□□□ -1.81
UBC6YER100W YDR249CQ03787 373 aa3.73□□□□□ -1.81
UBC6YER100W YOL160WQ08321 113 aa3.73□□□□□ -1.81
UBC6YER100W PSF1Q12488 208 aa3.73□□□□□ -1.81
UBC6YER100W YPR170W-BP0C5R9 85 aa3.72□□□□□ -1.81
UBC6YER100W TRX3P25372 127 aa3.72□□□□□ -1.81
UBC6YER100W FIG1P38224 298 aa3.72□□□□□ -1.81
UBC6YER100W MED6P38782 295 aa3.72□□□□□ -1.81
UBC6YER100W LSM4P40070 187 aaKnown RBP3.72□□□□□ -1.81
UBC6YER100W TIF34P40217 347 aaKnown RBP3.72□□□□□ -1.81
UBC6YER100W ATG39Q06159 398 aa3.72□□□□□ -1.81
UBC6YER100W YOR268CQ08734 132 aa3.72□□□□□ -1.81
UBC6YER100W NSL1Q12143 216 aa3.72□□□□□ -1.81
UBC6YER100W MBF1O14467 151 aaKnown RBP3.71□□□□□ -1.82
UBC6YER100W REP2P03872 296 aa3.71□□□□□ -1.82
UBC6YER100W RPL9AP05738 191 aaKnown RBP3.71□□□□□ -1.82
UBC6YER100W UTP30P36144 274 aaKnown RBP3.71□□□□□ -1.82
UBC6YER100W NVJ1P38881 321 aa3.71□□□□□ -1.82
UBC6YER100W AST2P39945 430 aaKnown RBP3.71□□□□□ -1.82
UBC6YER100W YER076CP40049 302 aa3.71□□□□□ -1.82
UBC6YER100W GLE2P40066 365 aa3.71□□□□□ -1.82
UBC6YER100W RPL9BP51401 191 aaKnown RBP3.71□□□□□ -1.82
UBC6YER100W APJ1P53940 528 aa3.71□□□□□ -1.82
UBC6YER100W PEX12Q04370 399 aa3.71□□□□□ -1.82
UBC6YER100W YLR053CQ12026 108 aa3.71□□□□□ -1.82
UBC6YER100W YPL162CQ12042 273 aa3.71□□□□□ -1.82
UBC6YER100W CCA1P21269 546 aa3.7□□□□□ -1.82
UBC6YER100W AHC2P25649 128 aa3.7□□□□□ -1.82
UBC6YER100W MEI4P29467 408 aa3.7□□□□□ -1.82
UBC6YER100W SKG1P36169 355 aa3.7□□□□□ -1.82
UBC6YER100W FMP23P38231 175 aa3.7□□□□□ -1.82
UBC6YER100W YER188WP40103 239 aa3.7□□□□□ -1.82
UBC6YER100W GON7P46984 123 aa3.7□□□□□ -1.82
UBC6YER100W YGR026WP53217 278 aa3.7□□□□□ -1.82
UBC6YER100W GAS3Q03655 524 aa3.7□□□□□ -1.82
UBC6YER100W HPT1Q04178 221 aaKnown RBP3.7□□□□□ -1.82
UBC6YER100W DPM1P14020 267 aaKnown RBP3.69□□□□□ -1.82
UBC6YER100W RPB3P16370 318 aaKnown RBP3.69□□□□□ -1.82
UBC6YER100W PET9P18239 318 aaKnown RBP3.69□□□□□ -1.82
UBC6YER100W YCR090CP25654 182 aaKnown RBP3.69□□□□□ -1.82
UBC6YER100W SKI6P46948 246 aaPredicted RBP3.69□□□□□ -1.82
UBC6YER100W YLR031WQ07978 186 aa3.69□□□□□ -1.82
UBC6YER100W SAS5Q99314 248 aa3.69□□□□□ -1.82
UBC6YER100W YLR156WP0CE96 114 aa3.68□□□□□ -1.82
UBC6YER100W YLR159WP0CE97 114 aa3.68□□□□□ -1.82
UBC6YER100W YLR161WP0CE98 114 aa3.68□□□□□ -1.82
UBC6YER100W URA5P13298 226 aaKnown RBP3.68□□□□□ -1.82
UBC6YER100W MRPS28P21771 286 aa3.68□□□□□ -1.82
UBC6YER100W DER1P38307 211 aa3.68□□□□□ -1.82
UBC6YER100W ARP3P47117 449 aaKnown RBP3.68□□□□□ -1.82
UBC6YER100W SWP1Q02795 286 aa3.68□□□□□ -1.82
UBC6YER100W PLP1Q04004 230 aa3.68□□□□□ -1.82
UBC6YER100W MCP1Q12106 302 aa3.68□□□□□ -1.82
UBC6YER100W CMD1P06787 147 aaKnown RBP3.67□□□□□ -1.82
UBC6YER100W BET1P22804 142 aa3.67□□□□□ -1.82
UBC6YER100W SEC14P24280 304 aaKnown RBP3.67□□□□□ -1.82
UBC6YER100W ICE2P40499 491 aa3.67□□□□□ -1.82
UBC6YER100W YIL059CP40520 121 aa3.67□□□□□ -1.82
UBC6YER100W ARO8P53090 500 aaKnown RBP3.67□□□□□ -1.82
UBC6YER100W AIM34Q03673 198 aa3.67□□□□□ -1.82
UBC6YER100W SHH4Q06236 168 aa3.67□□□□□ -1.82
UBC6YER100W SUE1Q06524 206 aa3.67□□□□□ -1.82
UBC6YER100W RDI1Q12434 202 aa3.67□□□□□ -1.82
UBC6YER100W YFR032C-BQ8TGU2 87 aa3.67□□□□□ -1.82
UBC6YER100W CDC8P00572 216 aa3.66□□□□□ -1.82
UBC6YER100W RPS24AP0CX31 135 aaKnown RBP3.66□□□□□ -1.82
UBC6YER100W RPS24BP0CX32 135 aaKnown RBP3.66□□□□□ -1.82
UBC6YER100W CTR2P38865 189 aa3.66□□□□□ -1.82
UBC6YER100W EDC3P39998 551 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms