RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W FUS3P16892 353 aaKnown RBP1.44□□□□□ -2.18
CFT1YDR301W STE18P18852 110 aa1.44□□□□□ -2.18
CFT1YDR301W VMA5P31412 392 aaKnown RBP1.44□□□□□ -2.18
CFT1YDR301W DAL3P32459 195 aa1.44□□□□□ -2.18
CFT1YDR301W RPC34P32910 317 aa1.44□□□□□ -2.18
CFT1YDR301W GPI18P38211 433 aa1.44□□□□□ -2.18
CFT1YDR301W LAG1P38703 411 aa1.44□□□□□ -2.18
CFT1YDR301W PTC7P38797 343 aa1.44□□□□□ -2.18
CFT1YDR301W AGX1P43567 385 aa1.44□□□□□ -2.18
CFT1YDR301W ADO1P47143 340 aaKnown RBP1.44□□□□□ -2.18
CFT1YDR301W ABM1P47146 123 aa1.44□□□□□ -2.18
CFT1YDR301W FMP48P53233 369 aa1.44□□□□□ -2.18
CFT1YDR301W GTF1P53260 183 aaPredicted RBP1.44□□□□□ -2.18
CFT1YDR301W GIM3P53900 129 aa1.44□□□□□ -2.18
CFT1YDR301W GMC1Q04399 608 aa1.44□□□□□ -2.18
CFT1YDR301W MED7Q08278 222 aa1.44□□□□□ -2.18
CFT1YDR301W PEX27Q08580 376 aa1.44□□□□□ -2.18
CFT1YDR301W YPR108W-AQ3E7B3 70 aa1.44□□□□□ -2.18
CFT1YDR301W PET20Q99373 253 aa1.44□□□□□ -2.18
CFT1YDR301W SUA7P29055 345 aaPredicted RBP1.44□□□□□ -2.18
CFT1YDR301W SOR1P35497 357 aaKnown RBP1.44□□□□□ -2.18
CFT1YDR301W ECM31P38122 312 aa1.44□□□□□ -2.18
CFT1YDR301W PRS3P38689 320 aaKnown RBP1.44□□□□□ -2.18
CFT1YDR301W YND1P40009 630 aa1.44□□□□□ -2.18
CFT1YDR301W SWM2P40342 146 aa1.44□□□□□ -2.18
CFT1YDR301W BXI1P48558 297 aa1.44□□□□□ -2.18
CFT1YDR301W UFD1P53044 361 aa1.44□□□□□ -2.18
CFT1YDR301W VHT1P53241 593 aa1.44□□□□□ -2.18
CFT1YDR301W TEX1P53851 422 aaKnown RBP1.44□□□□□ -2.18
CFT1YDR301W SNA4Q07549 140 aa1.44□□□□□ -2.18
CFT1YDR301W SOR2Q07786 357 aa1.44□□□□□ -2.18
CFT1YDR301W HRD1Q08109 551 aa1.44□□□□□ -2.18
CFT1YDR301W YOR292CQ08743 309 aa1.44□□□□□ -2.18
CFT1YDR301W SCP1Q08873 200 aa1.44□□□□□ -2.18
CFT1YDR301W QCR2P07257 368 aa1.43□□□□□ -2.18
CFT1YDR301W RPS18AP0CX55 146 aaKnown RBP1.43□□□□□ -2.18
CFT1YDR301W RPS18BP0CX56 146 aaPredicted RBP1.43□□□□□ -2.18
CFT1YDR301W SEN2P16658 377 aa1.43□□□□□ -2.18
CFT1YDR301W FPR2P32472 135 aa1.43□□□□□ -2.18
CFT1YDR301W MTC7P32633 139 aa1.43□□□□□ -2.18
CFT1YDR301W RPB7P34087 171 aa1.43□□□□□ -2.18
CFT1YDR301W MCH2P36032 473 aa1.43□□□□□ -2.18
CFT1YDR301W CBT1P36038 271 aaPredicted RBP1.43□□□□□ -2.18
CFT1YDR301W BFR1P38934 470 aaKnown RBP RIP-Chip data1.43□□□□□ -2.18not detected
CFT1YDR301W HXT14P42833 540 aa1.43□□□□□ -2.18
CFT1YDR301W AIM25P47140 327 aa1.43□□□□□ -2.18
CFT1YDR301W GEP7P53171 287 aa1.43□□□□□ -2.18
CFT1YDR301W SED1Q01589 338 aa1.43□□□□□ -2.18
CFT1YDR301W FRE8Q12209 686 aa1.43□□□□□ -2.18
CFT1YDR301W MED4Q12343 284 aa1.43□□□□□ -2.18
CFT1YDR301W BBP1Q12365 385 aa1.43□□□□□ -2.18
CFT1YDR301W HUT1Q12520 339 aa1.43□□□□□ -2.18
CFT1YDR301W TRP4P07285 380 aaPredicted RBP1.43□□□□□ -2.18
CFT1YDR301W ATG22P25568 528 aa1.43□□□□□ -2.18
CFT1YDR301W OCH1P31755 480 aa1.43□□□□□ -2.18
CFT1YDR301W GLC7P32598 312 aaKnown RBP1.43□□□□□ -2.18
CFT1YDR301W AGA2P32781 87 aa1.43□□□□□ -2.18
CFT1YDR301W WSS1P38838 269 aa1.43□□□□□ -2.18
CFT1YDR301W SLM1P40485 686 aa1.43□□□□□ -2.18
CFT1YDR301W SGN1P40561 250 aaKnown RBP RIP-Chip data1.43□□□□□ -2.18not detected
CFT1YDR301W CAT5P41735 233 aa1.43□□□□□ -2.18
CFT1YDR301W GLR1P41921 483 aaKnown RBP1.43□□□□□ -2.18
CFT1YDR301W PAM16P42949 149 aa1.43□□□□□ -2.18
CFT1YDR301W COX18P53239 316 aa1.43□□□□□ -2.18
CFT1YDR301W ADH6Q04894 360 aaKnown RBP1.43□□□□□ -2.18
CFT1YDR301W NMA1Q06178 401 aaKnown RBP1.43□□□□□ -2.18
CFT1YDR301W YOR186WQ08560 144 aa1.43□□□□□ -2.18
CFT1YDR301W YER175W-AQ8TGU4 54 aa1.43□□□□□ -2.18
CFT1YDR301W UBA3Q99344 299 aa1.43□□□□□ -2.18
CFT1YDR301W ATP10P18496 279 aa1.43□□□□□ -2.18
CFT1YDR301W VAM7P32912 316 aa1.43□□□□□ -2.18
CFT1YDR301W UTP30P36144 274 aaKnown RBP1.43□□□□□ -2.18
CFT1YDR301W HPA3P39979 161 aa1.43□□□□□ -2.18
CFT1YDR301W GON7P46984 123 aa1.43□□□□□ -2.18
CFT1YDR301W PRM15Q03262 622 aa1.43□□□□□ -2.18
CFT1YDR301W NGL2Q03264 515 aaKnown RBP1.43□□□□□ -2.18
CFT1YDR301W THI74Q04083 370 aa1.43□□□□□ -2.18
CFT1YDR301W RAD28Q12021 506 aa1.43□□□□□ -2.18
CFT1YDR301W AEP3Q12089 606 aa1.43□□□□□ -2.18
CFT1YDR301W YCT1Q12235 531 aa1.43□□□□□ -2.18
CFT1YDR301W YPS3Q12303 508 aa1.43□□□□□ -2.18
CFT1YDR301W TFB5Q3E7C1 72 aaPredicted RBP1.43□□□□□ -2.18
CFT1YDR301W Q0297Q9ZZV8 51 aa1.43□□□□□ -2.18
CFT1YDR301W TOR2P32600 2474 aaKnown RBP1.43□□□□□ -2.18
CFT1YDR301W BGL2P15703 313 aaKnown RBP1.42□□□□□ -2.18
CFT1YDR301W SIP1P32578 815 aa1.42□□□□□ -2.18
CFT1YDR301W GEP4P38812 185 aa1.42□□□□□ -2.18
CFT1YDR301W COX15P40086 486 aa1.42□□□□□ -2.18
CFT1YDR301W RSM27P53305 110 aa1.42□□□□□ -2.18
CFT1YDR301W NOC4Q06512 552 aaPredicted RBP1.42□□□□□ -2.18
CFT1YDR301W ARR2Q06597 130 aa1.42□□□□□ -2.18
CFT1YDR301W ARR3Q06598 404 aa1.42□□□□□ -2.18
CFT1YDR301W YNG1Q08465 219 aa1.42□□□□□ -2.18
CFT1YDR301W VTS1Q08831 523 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
CFT1YDR301W ODC2Q99297 307 aa1.42□□□□□ -2.18
CFT1YDR301W GDH1P07262 454 aaKnown RBP1.42□□□□□ -2.18
CFT1YDR301W RPL35AP0CX84 120 aaKnown RBP1.42□□□□□ -2.18
CFT1YDR301W RPL35BP0CX85 120 aaKnown RBP1.42□□□□□ -2.18
CFT1YDR301W GCN3P14741 305 aa1.42□□□□□ -2.18
CFT1YDR301W CKS1P20486 150 aaKnown RBP1.42□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 41.5 ms