RNA–Protein interactions for RNA: YDR034C-C

YDR034C-C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR034C-C, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR034C-CYDR034C-C LIA1P47120 325 aaKnown RBP1.56□□□□□ -2.16
YDR034C-CYDR034C-C YNR077CP53758 84 aa1.56□□□□□ -2.16
YDR034C-CYDR034C-C FYV6P53913 173 aa1.56□□□□□ -2.16
YDR034C-CYDR034C-C ANT1Q06497 328 aa1.56□□□□□ -2.16
YDR034C-CYDR034C-C TUS1Q06412 1307 aa1.56□□□□□ -2.16
YDR034C-CYDR034C-C MATALPHA1P0CY06 175 aa1.55□□□□□ -2.16
YDR034C-CYDR034C-C HMLALPHA1P0CY07 175 aa1.55□□□□□ -2.16
YDR034C-CYDR034C-C SNC2P33328 115 aa1.55□□□□□ -2.16
YDR034C-CYDR034C-C RPC17P47076 161 aa1.55□□□□□ -2.16
YDR034C-CYDR034C-C SWP1Q02795 286 aa1.55□□□□□ -2.16
YDR034C-CYDR034C-C TFC1P32367 649 aa1.54□□□□□ -2.16
YDR034C-CYDR034C-C TCD1P38756 429 aa1.54□□□□□ -2.16
YDR034C-CYDR034C-C CDC123Q05791 360 aa1.54□□□□□ -2.16
YDR034C-CYDR034C-C PDR18P53756 1333 aa1.54□□□□□ -2.16
YDR034C-CYDR034C-C CDC28P00546 298 aaKnown RBP1.53□□□□□ -2.16
YDR034C-CYDR034C-C MRPL17P36528 281 aa1.53□□□□□ -2.16
YDR034C-CYDR034C-C EAF6P47128 113 aa1.53□□□□□ -2.16
YDR034C-CYDR034C-C GAS3Q03655 524 aa1.53□□□□□ -2.16
YDR034C-CYDR034C-C TDA8Q6B2U8 126 aa1.53□□□□□ -2.16
YDR034C-CYDR034C-C SRY1P36007 326 aa1.52□□□□□ -2.17
YDR034C-CYDR034C-C TVP38P36164 337 aa1.52□□□□□ -2.17
YDR034C-CYDR034C-C ERJ5P43613 295 aaPredicted RBP1.52□□□□□ -2.17
YDR034C-CYDR034C-C BXI1P48558 297 aa1.52□□□□□ -2.17
YDR034C-CYDR034C-C MPA43P53583 542 aaPredicted RBP1.52□□□□□ -2.17
YDR034C-CYDR034C-C NOP13P53883 403 aaKnown RBP RIP-Chip data1.52□□□□□ -2.17not detected
YDR034C-CYDR034C-C MIC26P50087 233 aa1.51□□□□□ -2.17
YDR034C-CYDR034C-C BRR6P53062 197 aa1.51□□□□□ -2.17
YDR034C-CYDR034C-C YDL180WQ12301 547 aa1.51□□□□□ -2.17
YDR034C-CYDR034C-C TIM9O74700 87 aa1.5□□□□□ -2.17
YDR034C-CYDR034C-C CPA1P07258 411 aaKnown RBP1.5□□□□□ -2.17
YDR034C-CYDR034C-C APS1P35181 156 aa1.5□□□□□ -2.17
YDR034C-CYDR034C-C YBR209WP38311 105 aa1.5□□□□□ -2.17
YDR034C-CYDR034C-C FAR7P43592 221 aa1.5□□□□□ -2.17
YDR034C-CYDR034C-C YIL177CP40434 1758 aa1.49□□□□□ -2.17
YDR034C-CYDR034C-C YJL225CP40889 1758 aa1.49□□□□□ -2.17
YDR034C-CYDR034C-C RHO1P06780 209 aaKnown RBP1.49□□□□□ -2.17
YDR034C-CYDR034C-C RPL24BP24000 155 aaKnown RBP1.49□□□□□ -2.17
YDR034C-CYDR034C-C VMA6P32366 345 aaKnown RBP1.49□□□□□ -2.17
YDR034C-CYDR034C-C GVP36P40531 326 aaKnown RBP1.49□□□□□ -2.17
YDR034C-CYDR034C-C VAR1P02381 398 aa1.48□□□□□ -2.17
YDR034C-CYDR034C-C RPL28P02406 149 aaKnown RBP1.48□□□□□ -2.17
YDR034C-CYDR034C-C DBF2P22204 572 aa1.48□□□□□ -2.17
YDR034C-CYDR034C-C MIC12P38341 106 aa1.48□□□□□ -2.17
YDR034C-CYDR034C-C YER076CP40049 302 aa1.48□□□□□ -2.17
YDR034C-CYDR034C-C ALG13P53178 202 aa1.48□□□□□ -2.17
YDR034C-CYDR034C-C UBC7Q02159 165 aa1.48□□□□□ -2.17
YDR034C-CYDR034C-C GPM2Q12008 311 aa1.48□□□□□ -2.17
YDR034C-CYDR034C-C FSF1Q12029 327 aaKnown RBP1.48□□□□□ -2.17
YDR034C-CYDR034C-C YMR31P19955 123 aa1.47□□□□□ -2.17
YDR034C-CYDR034C-C PPA2P28239 310 aa1.47□□□□□ -2.17
YDR034C-CYDR034C-C MSB2P32334 1306 aa1.47□□□□□ -2.17
YDR034C-CYDR034C-C AST2P39945 430 aaKnown RBP1.47□□□□□ -2.17
YDR034C-CYDR034C-C RMD6P39975 231 aa1.47□□□□□ -2.17
YDR034C-CYDR034C-C YER085CP40058 173 aa1.47□□□□□ -2.17
YDR034C-CYDR034C-C CUS2P53830 285 aaPredicted RBP1.47□□□□□ -2.17
YDR034C-CYDR034C-C THP2O13539 261 aaKnown RBP1.46□□□□□ -2.18
YDR034C-CYDR034C-C RIO2P40160 425 aaKnown RBP1.46□□□□□ -2.18
YDR034C-CYDR034C-C KNH1P50112 268 aa1.46□□□□□ -2.18
YDR034C-CYDR034C-C POP3P53833 195 aaPredicted RBP1.46□□□□□ -2.18
YDR034C-CYDR034C-C MCP1Q12106 302 aa1.46□□□□□ -2.18
YDR034C-CYDR034C-C ATG40Q99325 256 aa1.46□□□□□ -2.18
YDR034C-CYDR034C-C YBR285WP38354 144 aa1.45□□□□□ -2.18
YDR034C-CYDR034C-C NUP57P48837 541 aa1.45□□□□□ -2.18
YDR034C-CYDR034C-C YNL146C-AQ3E7Z1 64 aa1.45□□□□□ -2.18
YDR034C-CYDR034C-C URA5P13298 226 aaKnown RBP1.44□□□□□ -2.18
YDR034C-CYDR034C-C BET1P22804 142 aa1.43□□□□□ -2.18
YDR034C-CYDR034C-C SEC17P32602 292 aa1.43□□□□□ -2.18
YDR034C-CYDR034C-C TCA17P32613 152 aa1.43□□□□□ -2.18
YDR034C-CYDR034C-C PTM1P32857 523 aa1.43□□□□□ -2.18
YDR034C-CYDR034C-C SHE2P36068 246 aaKnown RBP RIP-Chip data1.43□□□□□ -2.18not detected
YDR034C-CYDR034C-C YLR236CA0A023PZG4 107 aa1.42□□□□□ -2.18
YDR034C-CYDR034C-C KSS1P14681 368 aa1.42□□□□□ -2.18
YDR034C-CYDR034C-C UTP30P36144 274 aaKnown RBP1.42□□□□□ -2.18
YDR034C-CYDR034C-C YDR274CP87283 123 aa1.42□□□□□ -2.18
YDR034C-CYDR034C-C CUE4Q04201 117 aaPredicted RBP1.42□□□□□ -2.18
YDR034C-CYDR034C-C BMH2P34730 273 aaKnown RBP1.41□□□□□ -2.18
YDR034C-CYDR034C-C JLP1Q12358 412 aa1.41□□□□□ -2.18
YDR034C-CYDR034C-C ACC1Q00955 2233 aaKnown RBP1.41□□□□□ -2.18
YDR034C-CYDR034C-C YBR121C-AP0C5L4 52 aa1.4□□□□□ -2.18
YDR034C-CYDR034C-C IDH1P28834 360 aaKnown RBP RIP-Chip data1.4□□□□□ -2.18not detected
YDR034C-CYDR034C-C OPY1P38271 328 aa1.4□□□□□ -2.18
YDR034C-CYDR034C-C YHR214C-EQ8TGK0 99 aa1.4□□□□□ -2.18
YDR034C-CYDR034C-C SEY1Q99287 776 aa1.4□□□□□ -2.18
YDR034C-CYDR034C-C SIR2P06700 562 aa1.4□□□□□ -2.19
YDR034C-CYDR034C-C GCN3P14741 305 aa1.4□□□□□ -2.19
YDR034C-CYDR034C-C MGM101P32787 269 aaKnown RBP1.4□□□□□ -2.19
YDR034C-CYDR034C-C RTR1P40084 226 aaPredicted RBP1.4□□□□□ -2.19
YDR034C-CYDR034C-C YRB1P41920 201 aaKnown RBP1.4□□□□□ -2.19
YDR034C-CYDR034C-C ADO1P47143 340 aaKnown RBP1.4□□□□□ -2.19
YDR034C-CYDR034C-C YDR249CQ03787 373 aa1.4□□□□□ -2.19
YDR034C-CYDR034C-C RAD28Q12021 506 aa1.4□□□□□ -2.19
YDR034C-CYDR034C-C NHP6BP11633 99 aaKnown RBP1.39□□□□□ -2.19
YDR034C-CYDR034C-C RCE1Q03530 315 aa1.39□□□□□ -2.19
YDR034C-CYDR034C-C YHR007C-AQ07074 71 aa1.39□□□□□ -2.19
YDR034C-CYDR034C-C RPL25P04456 142 aaKnown RBP1.38□□□□□ -2.19
YDR034C-CYDR034C-C SEC11P15367 167 aa1.38□□□□□ -2.19
YDR034C-CYDR034C-C SIP3P38717 1229 aa1.38□□□□□ -2.19
YDR034C-CYDR034C-C RTC3P38804 111 aaPredicted RBP1.38□□□□□ -2.19
YDR034C-CYDR034C-C RPL37AP49166 88 aaKnown RBP1.38□□□□□ -2.19
YDR034C-CYDR034C-C YGR050CP53231 118 aa1.38□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 64.1 ms