RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C RPL9BP51401 191 aaKnown RBP2.41□□□□□ -2.02
RRP42YDL111C SMD2Q06217 110 aaKnown RBP2.41□□□□□ -2.02
RRP42YDL111C GGA1Q06336 557 aa2.41□□□□□ -2.02
RRP42YDL111C NOC4Q06512 552 aaPredicted RBP2.41□□□□□ -2.02
RRP42YDL111C YPR195CQ06594 109 aa2.41□□□□□ -2.02
RRP42YDL111C YDL012CQ12489 107 aa2.41□□□□□ -2.02
RRP42YDL111C YDL085C-AQ3E7B7 68 aaKnown RBP2.41□□□□□ -2.02
RRP42YDL111C TDA8Q6B2U8 126 aa2.41□□□□□ -2.02
RRP42YDL111C PUT1P09368 476 aa2.4□□□□□ -2.03
RRP42YDL111C TRR1P29509 319 aaKnown RBP2.4□□□□□ -2.03
RRP42YDL111C PTM1P32857 523 aa2.4□□□□□ -2.03
RRP42YDL111C SKG1P36169 355 aa2.4□□□□□ -2.03
RRP42YDL111C YER084WP40057 128 aa2.4□□□□□ -2.03
RRP42YDL111C PDS1P40316 373 aaPredicted RBP2.4□□□□□ -2.03
RRP42YDL111C PIR5P46999 287 aa2.4□□□□□ -2.03
RRP42YDL111C AIM25P47140 327 aa2.4□□□□□ -2.03
RRP42YDL111C YGL088WP53151 121 aa2.4□□□□□ -2.03
RRP42YDL111C NRK1P53915 240 aa2.4□□□□□ -2.03
RRP42YDL111C ARO80Q04052 950 aa2.4□□□□□ -2.03
RRP42YDL111C YLR036CQ07986 203 aa2.4□□□□□ -2.03
RRP42YDL111C AKR2Q12013 749 aa2.4□□□□□ -2.03
RRP42YDL111C PSF1Q12488 208 aa2.4□□□□□ -2.03
RRP42YDL111C REP2P03872 296 aa2.39□□□□□ -2.03
RRP42YDL111C KRE1P17260 313 aa2.39□□□□□ -2.03
RRP42YDL111C GRX2P17695 143 aaKnown RBP2.39□□□□□ -2.03
RRP42YDL111C SCM4P32564 187 aa2.39□□□□□ -2.03
RRP42YDL111C SEC17P32602 292 aa2.39□□□□□ -2.03
RRP42YDL111C AST2P39945 430 aaKnown RBP2.39□□□□□ -2.03
RRP42YDL111C SPO73P40031 143 aa2.39□□□□□ -2.03
RRP42YDL111C CAB4P53332 305 aa2.39□□□□□ -2.03
RRP42YDL111C YIP3P53633 176 aa2.39□□□□□ -2.03
RRP42YDL111C APJ1P53940 528 aa2.39□□□□□ -2.03
RRP42YDL111C SNO1Q03144 224 aa2.39□□□□□ -2.03
RRP42YDL111C YOL024WQ08172 172 aa2.39□□□□□ -2.03
RRP42YDL111C YHR214C-EQ8TGK0 99 aa2.39□□□□□ -2.03
RRP42YDL111C IGO2Q9P305 131 aa2.39□□□□□ -2.03
RRP42YDL111C IKI3Q06706 1349 aaKnown RBP2.39□□□□□ -2.03
RRP42YDL111C CDC8P00572 216 aa2.38□□□□□ -2.03
RRP42YDL111C RPL26AP05743 127 aaKnown RBP2.38□□□□□ -2.03
RRP42YDL111C SIR2P06700 562 aa2.38□□□□□ -2.03
RRP42YDL111C SNF4P12904 322 aa2.38□□□□□ -2.03
RRP42YDL111C GCY1P14065 312 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
RRP42YDL111C SKI3P17883 1432 aaKnown RBP2.38□□□□□ -2.03
RRP42YDL111C CNB1P25296 175 aa2.38□□□□□ -2.03
RRP42YDL111C TAH1P25638 111 aaPredicted RBP2.38□□□□□ -2.03
RRP42YDL111C MGT1P26188 188 aa2.38□□□□□ -2.03
RRP42YDL111C YHL026CP38740 315 aa2.38□□□□□ -2.03
RRP42YDL111C MED6P38782 295 aa2.38□□□□□ -2.03
RRP42YDL111C CTR2P38865 189 aa2.38□□□□□ -2.03
RRP42YDL111C SMD3P43321 101 aaKnown RBP2.38□□□□□ -2.03
RRP42YDL111C JAC1P53193 184 aa2.38□□□□□ -2.03
RRP42YDL111C RPL26BP53221 127 aaKnown RBP2.38□□□□□ -2.03
RRP42YDL111C YNL184CP53876 108 aa2.38□□□□□ -2.03
RRP42YDL111C PRM15Q03262 622 aa2.38□□□□□ -2.03
RRP42YDL111C GAS3Q03655 524 aa2.38□□□□□ -2.03
RRP42YDL111C YOL160WQ08321 113 aa2.38□□□□□ -2.03
RRP42YDL111C GRE1Q08969 168 aa2.38□□□□□ -2.03
RRP42YDL111C YPL162CQ12042 273 aa2.38□□□□□ -2.03
RRP42YDL111C YHR032W-AP0C5N6 59 aa2.37□□□□□ -2.03
RRP42YDL111C YLR156WP0CE96 114 aa2.37□□□□□ -2.03
RRP42YDL111C YLR159WP0CE97 114 aa2.37□□□□□ -2.03
RRP42YDL111C YLR161WP0CE98 114 aa2.37□□□□□ -2.03
RRP42YDL111C MIG1P27705 504 aa2.37□□□□□ -2.03
RRP42YDL111C RME1P32338 300 aaKnown RBP2.37□□□□□ -2.03
RRP42YDL111C VMA11P32842 164 aa2.37□□□□□ -2.03
RRP42YDL111C UTP30P36144 274 aaKnown RBP2.37□□□□□ -2.03
RRP42YDL111C FES1P38260 290 aa2.37□□□□□ -2.03
RRP42YDL111C SRP14P38985 146 aa2.37□□□□□ -2.03
RRP42YDL111C MRPL49P40858 161 aaPredicted RBP2.37□□□□□ -2.03
RRP42YDL111C UBC12P52491 188 aa2.37□□□□□ -2.03
RRP42YDL111C EFM5P53200 248 aaKnown RBP2.37□□□□□ -2.03
RRP42YDL111C YNL140CP53910 189 aa2.37□□□□□ -2.03
RRP42YDL111C YLR460CP54007 376 aa2.37□□□□□ -2.03
RRP42YDL111C YDR249CQ03787 373 aa2.37□□□□□ -2.03
RRP42YDL111C GRX8Q05926 109 aa2.37□□□□□ -2.03
RRP42YDL111C RIO1Q12196 484 aaKnown RBP2.37□□□□□ -2.03
RRP42YDL111C URA5P13298 226 aaKnown RBP2.36□□□□□ -2.03
RRP42YDL111C BET1P22804 142 aa2.36□□□□□ -2.03
RRP42YDL111C MAK5P38112 773 aaPredicted RBP2.36□□□□□ -2.03
RRP42YDL111C GLE2P40066 365 aa2.36□□□□□ -2.03
RRP42YDL111C FMP32P43557 207 aa2.36□□□□□ -2.03
RRP42YDL111C SWP1Q02795 286 aa2.36□□□□□ -2.03
RRP42YDL111C MCP1Q12106 302 aa2.36□□□□□ -2.03
RRP42YDL111C PRM7Q12459 698 aa2.36□□□□□ -2.03
RRP42YDL111C TSC3Q3E790 80 aa2.36□□□□□ -2.03
RRP42YDL111C YPR096CO13587 100 aa2.35□□□□□ -2.03
RRP42YDL111C MBF1O14467 151 aaKnown RBP2.35□□□□□ -2.03
RRP42YDL111C MSW1P04803 379 aa2.35□□□□□ -2.03
RRP42YDL111C RPB3P16370 318 aaKnown RBP2.35□□□□□ -2.03
RRP42YDL111C SCO1P23833 295 aa2.35□□□□□ -2.03
RRP42YDL111C TRX3P25372 127 aa2.35□□□□□ -2.03
RRP42YDL111C SDH4P37298 181 aa2.35□□□□□ -2.03
RRP42YDL111C YJL144WP47009 104 aa2.35□□□□□ -2.03
RRP42YDL111C SNX4P47057 423 aa2.35□□□□□ -2.03
RRP42YDL111C YNL247WP53852 767 aaKnown RBP2.35□□□□□ -2.03
RRP42YDL111C TRM12Q04235 462 aa2.35□□□□□ -2.03
RRP42YDL111C ARR2Q06597 130 aa2.35□□□□□ -2.03
RRP42YDL111C YLR031WQ07978 186 aa2.35□□□□□ -2.03
RRP42YDL111C YFR032C-BQ8TGU2 87 aa2.35□□□□□ -2.03
RRP42YDL111C FKS1P38631 1876 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms