RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C SWI1P09547 1314 aa1.28□□□□□ -2.2
ASM4YDL088C SGA1P08019 549 aa1.27□□□□□ -2.21
ASM4YDL088C FCY2P17064 533 aa1.27□□□□□ -2.21
ASM4YDL088C GRX2P17695 143 aaKnown RBP1.27□□□□□ -2.21
ASM4YDL088C TOM40P23644 387 aaKnown RBP1.27□□□□□ -2.21
ASM4YDL088C OAC1P32332 324 aa1.27□□□□□ -2.21
ASM4YDL088C RME1P32338 300 aaKnown RBP1.27□□□□□ -2.21
ASM4YDL088C ERG24P32462 438 aaKnown RBP1.27□□□□□ -2.21
ASM4YDL088C RPF1P38805 295 aaKnown RBP1.27□□□□□ -2.21
ASM4YDL088C FMP32P43557 207 aa1.27□□□□□ -2.21
ASM4YDL088C YIP3P53633 176 aa1.27□□□□□ -2.21
ASM4YDL088C YNL247WP53852 767 aaKnown RBP1.27□□□□□ -2.21
ASM4YDL088C YNL140CP53910 189 aa1.27□□□□□ -2.21
ASM4YDL088C NUP49Q02199 472 aa1.27□□□□□ -2.21
ASM4YDL088C ARO80Q04052 950 aa1.27□□□□□ -2.21
ASM4YDL088C GGA1Q06336 557 aa1.27□□□□□ -2.21
ASM4YDL088C YLR030WQ07967 263 aa1.27□□□□□ -2.21
ASM4YDL088C YOL019WQ08157 551 aa1.27□□□□□ -2.21
ASM4YDL088C YOL024WQ08172 172 aa1.27□□□□□ -2.21
ASM4YDL088C YPL257WQ08974 193 aa1.27□□□□□ -2.21
ASM4YDL088C NOT5Q12514 560 aaPredicted RBP1.27□□□□□ -2.21
ASM4YDL088C YHR086W-AQ3E746 53 aa1.27□□□□□ -2.21
ASM4YDL088C CDC7P06243 507 aa1.26□□□□□ -2.21
ASM4YDL088C QCR2P07257 368 aa1.26□□□□□ -2.21
ASM4YDL088C DSF1P0CX08 502 aa1.26□□□□□ -2.21
ASM4YDL088C YNR073CP0CX09 502 aa1.26□□□□□ -2.21
ASM4YDL088C SNF4P12904 322 aa1.26□□□□□ -2.21
ASM4YDL088C AME1P38313 324 aa1.26□□□□□ -2.21
ASM4YDL088C SRP14P38985 146 aa1.26□□□□□ -2.21
ASM4YDL088C YAR068WP39564 161 aa1.26□□□□□ -2.21
ASM4YDL088C RMD6P39975 231 aa1.26□□□□□ -2.21
ASM4YDL088C IRC22P40006 225 aa1.26□□□□□ -2.21
ASM4YDL088C FIS1P40515 155 aa1.26□□□□□ -2.21
ASM4YDL088C ARC15P40518 154 aaRIP-Chip data1.26□□□□□ -2.21not detected
ASM4YDL088C YFR054CP43622 192 aa1.26□□□□□ -2.21
ASM4YDL088C MDM34P53083 459 aa1.26□□□□□ -2.21
ASM4YDL088C YGR050CP53231 118 aa1.26□□□□□ -2.21
ASM4YDL088C YNL184CP53876 108 aa1.26□□□□□ -2.21
ASM4YDL088C COG5P53951 403 aa1.26□□□□□ -2.21
ASM4YDL088C SNO1Q03144 224 aa1.26□□□□□ -2.21
ASM4YDL088C HPT1Q04178 221 aaKnown RBP1.26□□□□□ -2.21
ASM4YDL088C LPP1Q04396 274 aa1.26□□□□□ -2.21
ASM4YDL088C YMR315WQ04869 349 aaKnown RBP1.26□□□□□ -2.21
ASM4YDL088C NIP7Q08962 181 aaKnown RBP1.26□□□□□ -2.21
ASM4YDL088C IGO2Q9P305 131 aa1.26□□□□□ -2.21
ASM4YDL088C RPL26AP05743 127 aaKnown RBP1.25□□□□□ -2.21
ASM4YDL088C PUT1P09368 476 aa1.25□□□□□ -2.21
ASM4YDL088C MRPS28P21771 286 aa1.25□□□□□ -2.21
ASM4YDL088C SCO1P23833 295 aa1.25□□□□□ -2.21
ASM4YDL088C CNB1P25296 175 aa1.25□□□□□ -2.21
ASM4YDL088C ARO7P32178 256 aa1.25□□□□□ -2.21
ASM4YDL088C RCN1P36054 211 aa1.25□□□□□ -2.21
ASM4YDL088C YBR063CP38083 404 aa1.25□□□□□ -2.21
ASM4YDL088C POP4P38336 279 aa1.25□□□□□ -2.21
ASM4YDL088C AST2P39945 430 aaKnown RBP1.25□□□□□ -2.21
ASM4YDL088C LSM4P40070 187 aaKnown RBP1.25□□□□□ -2.21
ASM4YDL088C TIF34P40217 347 aaKnown RBP1.25□□□□□ -2.21
ASM4YDL088C OST2P46964 130 aa1.25□□□□□ -2.21
ASM4YDL088C UBC12P52491 188 aa1.25□□□□□ -2.21
ASM4YDL088C RPL26BP53221 127 aaKnown RBP1.25□□□□□ -2.21
ASM4YDL088C PLP1Q04004 230 aa1.25□□□□□ -2.21
ASM4YDL088C PEX12Q04370 399 aa1.25□□□□□ -2.21
ASM4YDL088C FCF1Q05498 189 aaPredicted RBP1.25□□□□□ -2.21
ASM4YDL088C YLR031WQ07978 186 aa1.25□□□□□ -2.21
ASM4YDL088C GRE1Q08969 168 aa1.25□□□□□ -2.21
ASM4YDL088C YLR050CQ12155 161 aaKnown RBP1.25□□□□□ -2.21
ASM4YDL088C GEP5Q12393 293 aa1.25□□□□□ -2.21
ASM4YDL088C YHR139C-AO13536 103 aa1.25□□□□□ -2.21
ASM4YDL088C REP2P03872 296 aa1.25□□□□□ -2.21
ASM4YDL088C Q0255P03881 472 aa1.25□□□□□ -2.21
ASM4YDL088C SIR2P06700 562 aa1.25□□□□□ -2.21
ASM4YDL088C CCA1P21269 546 aa1.25□□□□□ -2.21
ASM4YDL088C ATG22P25568 528 aa1.25□□□□□ -2.21
ASM4YDL088C TAH1P25638 111 aaPredicted RBP1.25□□□□□ -2.21
ASM4YDL088C PTM1P32857 523 aa1.25□□□□□ -2.21
ASM4YDL088C CLG1P35190 452 aa1.25□□□□□ -2.21
ASM4YDL088C MSA2P36157 363 aa1.25□□□□□ -2.21
ASM4YDL088C SKG1P36169 355 aa1.25□□□□□ -2.21
ASM4YDL088C FIG1P38224 298 aa1.25□□□□□ -2.21
ASM4YDL088C FMP23P38231 175 aa1.25□□□□□ -2.21
ASM4YDL088C NVJ1P38881 321 aa1.25□□□□□ -2.21
ASM4YDL088C SKI6P46948 246 aaPredicted RBP1.25□□□□□ -2.21
ASM4YDL088C AIM25P47140 327 aa1.25□□□□□ -2.21
ASM4YDL088C YJR146WP47174 117 aa1.25□□□□□ -2.21
ASM4YDL088C YGR026WP53217 278 aa1.25□□□□□ -2.21
ASM4YDL088C PET191Q02772 108 aa1.25□□□□□ -2.21
ASM4YDL088C RSM10Q03201 203 aa1.25□□□□□ -2.21
ASM4YDL088C YDR249CQ03787 373 aa1.25□□□□□ -2.21
ASM4YDL088C GRX8Q05926 109 aa1.25□□□□□ -2.21
ASM4YDL088C YLR179CQ06252 201 aaKnown RBP1.25□□□□□ -2.21
ASM4YDL088C RIO1Q12196 484 aaKnown RBP1.25□□□□□ -2.21
ASM4YDL088C BBP1Q12365 385 aa1.25□□□□□ -2.21
ASM4YDL088C PSF1Q12488 208 aa1.25□□□□□ -2.21
ASM4YDL088C MBF1O14467 151 aaKnown RBP1.24□□□□□ -2.21
ASM4YDL088C RPL9AP05738 191 aaKnown RBP1.24□□□□□ -2.21
ASM4YDL088C YPR170W-BP0C5R9 85 aa1.24□□□□□ -2.21
ASM4YDL088C URA5P13298 226 aaKnown RBP1.24□□□□□ -2.21
ASM4YDL088C SEC14P24280 304 aaKnown RBP1.24□□□□□ -2.21
ASM4YDL088C YKR041WP36134 250 aa1.24□□□□□ -2.21
ASM4YDL088C TVP38P36164 337 aa1.24□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms